NO16G01070, NO16G01070 (gene) Nannochloropsis oceanica

Overview
NameNO16G01070
Unique NameNO16G01070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1344
Alignment locationchr16:338205..339548 -

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Properties
Property NameValue
DescriptionClusterin-associated protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:338205..339548 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019366Clusterin-associated_protein-1
Homology
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: EWM24025.1 (clusterin-associated protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 114.0 bits (284), Expect = 6.800e-22
Identity = 114/267 (42.70%), Postives = 148/267 (55.43%), Query Frame = 0 
Query:    3 TDDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVF---------------------AKDYDYRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQP------------VEHLYQYPQHAQILGPGNRKASTASSILDMGTKRSSPSSLGEDTE 237
            T+D+P+LR+TL+ L++QHAALDAEE+M+E ++++KK E+ R+EARL+SLQ+V P+ + E+ +LE+EL +QY+ YVR ++N+++LE E+D LR AE AKQ+RAER           XXXXXXXXXXXXXXXXXXXXXXXX                        K Y                                          QP            +EHL QY     +    NRK STASSIL+MG KRSSPSSLGE  E
Sbjct:    7 TEDVPSLRRTLESLQRQHAALDAEERMLELKVEEKKGELKRSEARLQSLQSVRPSLVEEHNMLEKELARQYDEYVRLYQNLDFLEQEVDSLRSAELAKQSRAERRIRCVQRRVQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMSDGDGRRRMKASERGAIKGYGKEAMEGQLFVMDYGDEVITDTKALNNVMDVKTSRGRRTSVSQPSPPTSTSSASPSMEHLKQYGHPPPL---ANRKFSTASSILEMGAKRSSPSSLGEGEE 270
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BLAST of NO16G01070 vs. NCBI_GenBank
Match: ETI47027.1 (hypothetical protein F443_08644 [Phytophthora parasitica P1569] >ETK86955.1 hypothetical protein L915_08478 [Phytophthora parasitica] >ETL40369.1 hypothetical protein L916_08407 [Phytophthora parasitica] >ETM46782.1 hypothetical protein L914_08356 [Phytophthora parasitica] >ETP16818.1 hypothetical protein F441_08621 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 87.8 bits (216), Expect = 5.200e-14
Identity = 49/103 (47.57%), Postives = 71/103 (68.93%), Query Frame = 0 
Query:    4 DDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAER 107
            D L +L++ +++ E+Q   LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD     E  K A  +R
Sbjct:  198 DILVSLQENVELTERQVVELDAEEKALAAKIKKAQTDLERSEKRLKSLQHVRPAFMDEYEKLEKELERQYAIYCERFRNLDYLQRELDLHNSREMKKLAENDR 300
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: XP_008905477.1 (hypothetical protein PPTG_10997 [Phytophthora parasitica INRA-310] >ETL93521.1 hypothetical protein L917_08305 [Phytophthora parasitica] >ETN08916.1 hypothetical protein PPTG_10997 [Phytophthora parasitica INRA-310] >ETO75751.1 hypothetical protein F444_08700 [Phytophthora parasitica P1976] >ETP44875.1 hypothetical protein F442_08576 [Phytophthora parasitica P10297] >KUF89049.1 Clusterin-associated protein 1 [Phytophthora nicotianae] >KUG01357.1 Clusterin-associated protein 1 [Phytophthora nicotianae])

HSP 1 Score: 87.8 bits (216), Expect = 5.200e-14
Identity = 49/103 (47.57%), Postives = 71/103 (68.93%), Query Frame = 0 
Query:    4 DDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAER 107
            D L +L++ +++ E+Q   LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD     E  K A  +R
Sbjct:  198 DILVSLQENVELTERQVVELDAEEKALAAKIKKAQTDLERSEKRLKSLQHVRPAFMDEYEKLEKELERQYAIYCERFRNLDYLQRELDLHNSREMKKLAENDR 300
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: KUF97514.1 (hypothetical protein AM588_10009549 [Phytophthora nicotianae])

HSP 1 Score: 87.8 bits (216), Expect = 5.200e-14
Identity = 49/103 (47.57%), Postives = 71/103 (68.93%), Query Frame = 0 
Query:    4 DDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAER 107
            D L +L++ +++ E+Q   LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD     E  K A  +R
Sbjct:  198 DILVSLQENVELTERQVVELDAEEKALAAKIKKAQTDLERSEKRLKSLQHVRPAFMDEYEKLEKELERQYAIYCERFRNLDYLQRELDLHNSREMKKLAENDR 300
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: XP_002904769.1 (clusterin-associated protein 1 [Phytophthora infestans T30-4] >EEY53151.1 clusterin-associated protein 1 [Phytophthora infestans T30-4])

HSP 1 Score: 87.4 bits (215), Expect = 6.800e-14
Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 0 
Query:    4 DDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAER 107
            D L  L++ +++ E+Q   LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD     E  K A  +R
Sbjct:  198 DILVNLQENVELTERQVVELDAEEKALAAKIKKAQTDLERSEKRLKSLQHVRPAFMDEYEKLEKELERQYAIYCERFRNLDYLQRELDLHNSREMKKLAENDR 300
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: XP_009520725.1 (hypothetical protein PHYSODRAFT_344952 [Phytophthora sojae] >EGZ25437.1 hypothetical protein PHYSODRAFT_344952 [Phytophthora sojae])

HSP 1 Score: 85.1 bits (209), Expect = 3.400e-13
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 0 
Query:    6 LPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAER 107
            L  L+  +++ E Q   LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD     E  K A  +R
Sbjct:  200 LVNLQDNVELTEHQVVELDAEEKALAAKIKKAQTDLERSEKRLKSLQHVRPAFMDEYEKLEKELERQYAIYCERFRNLDYLQRELDLHNSREMKKLAENDR 300
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: XP_008611470.1 (hypothetical protein SDRG_07415 [Saprolegnia diclina VS20] >EQC35186.1 hypothetical protein SDRG_07415 [Saprolegnia diclina VS20])

HSP 1 Score: 84.0 bits (206), Expect = 7.500e-13
Identity = 43/81 (53.09%), Postives = 62/81 (76.54%), Query Frame = 0 
Query:   11 QTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELD 92
            + ++ +E+Q A LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD
Sbjct:  202 ENVESMERQCAELDAEEKALSAKIKKAQGDLERSEKRLKSLQNVRPAFMDEYEKLEKELERQYAIYCERFRNLDYLQRELD 282
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: XP_012207930.1 (hypothetical protein SPRG_13687 [Saprolegnia parasitica CBS 223.65] >KDO21374.1 hypothetical protein SPRG_13687 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 84.0 bits (206), Expect = 7.500e-13
Identity = 43/81 (53.09%), Postives = 62/81 (76.54%), Query Frame = 0 
Query:   11 QTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELD 92
            + ++ +E+Q A LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD
Sbjct:  192 ENVESMERQCAELDAEEKALSAKIKKAQGDLERSEKRLKSLQNVRPAFMDEYEKLEKELERQYAIYCERFRNLDYLQRELD 272
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: OQR90861.1 (clusterin-associated protein 1 [Achlya hypogyna])

HSP 1 Score: 83.6 bits (205), Expect = 9.800e-13
Identity = 43/86 (50.00%), Postives = 65/86 (75.58%), Query Frame = 0 
Query:    6 LPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELD 92
            + ++++ +  +EQQ + LDAEE+ + ++IKK + ++ R+E RLKSLQ V PAFM EY  LE+ELE+QY +Y  RFRN++YL+ ELD
Sbjct:  197 IESVQENVASMEQQCSELDAEEKALGAKIKKAQGDLERSEKRLKSLQNVRPAFMDEYEKLEKELERQYVIYCERFRNLDYLQRELD 282
[Close]
BLAST of NO16G01070 vs. NCBI_GenBank
Match: XP_022084775.1 (clusterin-associated protein 1-like [Acanthaster planci])

HSP 1 Score: 79.3 bits (194), Expect = 1.900e-11
Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 0 
Query:    9 LRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAE 106
            +++T Q+LE     + ++E  +E++I KKK E+ RN  RL++LQ+V PAFM EY  LE +LEKQYE Y+ RFRN+ YLEH+L+    AE  +    E
Sbjct:  197 IKKTQQMLEN----VASDEANLEAKIDKKKAELERNHKRLQTLQSVRPAFMDEYEKLEVDLEKQYETYLERFRNLTYLEHQLEEFTRAEQDRFEETE 289
The following BLAST results are available for this feature:
BLAST of NO16G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24025.16.800e-2242.70clusterin-associated protein 1 [Nannochloropsis ga... [more]
ETI47027.15.200e-1447.57hypothetical protein F443_08644 [Phytophthora para... [more]
XP_008905477.15.200e-1447.57hypothetical protein PPTG_10997 [Phytophthora para... [more]
KUF97514.15.200e-1447.57hypothetical protein AM588_10009549 [Phytophthora ... [more]
XP_002904769.16.800e-1447.57clusterin-associated protein 1 [Phytophthora infes... [more]
XP_009520725.13.400e-1347.52hypothetical protein PHYSODRAFT_344952 [Phytophtho... [more]
XP_008611470.17.500e-1353.09hypothetical protein SDRG_07415 [Saprolegnia dicli... [more]
XP_012207930.17.500e-1353.09hypothetical protein SPRG_13687 [Saprolegnia paras... [more]
OQR90861.19.800e-1350.00clusterin-associated protein 1 [Achlya hypogyna][more]
XP_022084775.11.900e-1146.39clusterin-associated protein 1-like [Acanthaster p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003094NSK003094Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01070.3NO16G01070.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G01070.2NO16G01070.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G01070.1NO16G01070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|649173gene_5985Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100040g23gene6452Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01070.3NO16G01070.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G01070.2NO16G01070.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G01070.1NO16G01070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01070 ID=NO16G01070|Name=NO16G01070|organism=Nannochloropsis oceanica|type=gene|length=1344bp
AGGCCGTAATATCAGCATGAGGACAGATGACTTGCCGACGCTCCGCCAAA
CGTTGCAGGTTCTTGAGCAACAGCACGCGGCGCTCGATGCAGAGGAGCAG
ATGATCGAGTCTGAGGTACGTGGAGTGTTGGCATTGGGGTGGAATCGTCG
TGTCGTAGAAGTTCCTCGAACACATCAAAATCCGTCCACTCTTCCCGCAC
AGATCAAAAAGAAGAAAATTGAGGTGAACCGGAACGAGGCCCGGCTCAAG
AGCTTGCAGACCGTAAGgtacatatttgtttgtggcgagaaaggaataaa
tcgggtcattttctgatcacgcattctggggtgagccccaacataagctc
tcttcctttctttccctctcccctctcacggcccccatctcacccctctc
ccctcgtacacgacagCCCGGCATTCATGGGAGAATACACACTCCTCGAA
GAAGAGCTCGAGAAACAGTATGAGGTGTACGTGCGGCGTTTCCGGAACGT
GGAGTACTTAGAGCATGAACTTGACAGGCTCCGCGTGGCGGAACACGCCA
AGCAAGCGCGCGCGGAGAGGCGGCTTAGAAGGATGCAACAAGAAGTGCAG
GCAGAGGAGGAACGAAGGCTGGGAAGAGGTGGAAAAAAGGCAGGAGTTCA
AGGTGGAAGCAAAGGAGGTGGCGGTGTGTTTGCCAAGgtacgttttggga
agtggttgtattttggcgcaggggaggaggaatcctcacttcgcactctt
catctatacagGATTACGACTACCGTTTGGGGGGCAACAGCAATAAAGCC
AGCAGCAGTAGCATAAGGAGAGCAAGAAGCACGGCCAGgtacgtaagatg
gaaaaggggaaaattgcgggaagtgcattaattcatgtggcctctccttg
cttcccattcccctcttcttccagATCCGTCATCCGATCCCAACAACCAT
CACCACCACCCTCCTCCTCTTCAAGCCATCAACCAGTGGAACACCTGTAT
CAATACCCACAGCACGCTCAAATCTTGGGACCAGGCAATCGGAAGGCCTC
CACCGCCTCTTCAATTCTTGACATGGGGACTAAGCGTTCCTCGCCTTCCT
CATTGGGTGAGGACACGGAAGGGACTTTGGAGGGTGGGGGGAAGAGGATA
GTGAGGAAGAAGAGGAGATAGAGGAGGATGATTCGTCTTTGTTGCCAGCG
GAGGAGGAAGAGGATGAGCAGGACGACGAGGAAAGGGAAAAGGGGACAAA
GGGGGGGGAGGGCTTTTACCACCAGATGGAGGAAGACGATTTTTGAGAAG
ACAGCGAGCTAGCATGCAAAGAAAATAATGGTAGAAGTTGTAGA
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protein sequence of NO16G01070.3

>NO16G01070.3-protein ID=NO16G01070.3-protein|Name=NO16G01070.3|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MRTDDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKS
LQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAK
QARAERRLRRMQQEVQAEEERRLGRGGKKAGVQGGSKGGGGVFAKVRFGK
WLYFGAGEEESSLRTLHLYRITTTVWGATAIKPAAVA*
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protein sequence of NO16G01070.2

>NO16G01070.2-protein ID=NO16G01070.2-protein|Name=NO16G01070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MRTDDLPTLRQTLQVLEQQHAALDAEEQMIESEVRGVLALGWNRRVVEVP
RTHQNPSTLPAQIKKKKIEVNRNEARLKSLQTVSPAFMGEYTLLEEELEK
QYEVYVRRFRNVEYLEHELDRLRVAEHAKQARAERRLRRMQQEVQAEEER
RLGRGGKKAGVQGGSKGGGGVFAKDYDYRLGGNSNKASSSSIRRARSTAR
SVIRSQQPSPPPSSSSSHQPVEHLYQYPQHAQILGPGNRKASTASSILDM
GTKRSSPSSLGEDTEGTLEGGGKRIVRKKRR*
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protein sequence of NO16G01070.1

>NO16G01070.1-protein ID=NO16G01070.1-protein|Name=NO16G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bp
MRTDDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKS
LQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAK
QARAERRLRRMQQEVQAEEERRLGRGGKKAGVQGGSKGGGGVFAKDYDYR
LGGNSNKASSSSIRRARSTARSVIRSQQPSPPPSSSSSHQPVEHLYQYPQ
HAQILGPGNRKASTASSILDMGTKRSSPSSLGEDTEGTLEGGGKRIVRKK
RR*
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Synonyms
Publications