NO16G01000, NO16G01000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01000 vs. NCBI_GenBank
Match: EWM24015.1 (uroporphyrinogen-iii synthase [Nannochloropsis gaditana]) HSP 1 Score: 370.2 bits (949), Expect = 7.600e-99 Identity = 187/273 (68.50%), Postives = 226/273 (82.78%), Query Frame = 0 Query: 94 DLVVLTREAGKNDKLRKLLEAREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCE---EGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRVGMEFNVACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEALQ 364 ++VVLTREAGKNDKLR++LE+++ LE+PCIAHCHAEG+AQL++TL+ + FDYIVITSPEAAQVFLE A+TC YKPTNLV IGEATG LLKKAGA I FTPSKALAKVL VELPE+ EE+ GGM+ R+TA+VLYPASKRAA TLE+GL RG+ E E E E G + RLF+V RLNTYDTVPA+W++ + S A++C VVTFASPSALKVWA+R+GM+FN+ACIGETTATAA GW E RIFYP++APGI+GWA+AV +AL+ Sbjct: 117 NVVVLTREAGKNDKLRRILESQKITALEIPCIAHCHAEGYAQLKETLDGEAFDYIVITSPEAAQVFLEAARTCTLYKPTNLVSIGEATGELLKKAGASIVFTPSKALAKVLVVELPEVHEER-----GGMRRRKTAKVLYPASKRAAGTLEEGLQKRGLWEEVVEEEGEGMGGEKQSGRLFDVIRLNTYDTVPADWTDEEMSLAQSCAVVTFASPSALKVWAARLGMDFNMACIGETTATAAIALGWDESRIFYPKDAPGIDGWASAVMDALE 384
BLAST of NO16G01000 vs. NCBI_GenBank
Match: GAX15503.1 (uroporphyrinogen-III synthase [Fistulifera solaris]) HSP 1 Score: 193.7 bits (491), Expect = 9.700e-46 Identity = 118/265 (44.53%), Postives = 148/265 (55.85%), Query Frame = 0 Query: 101 EAGKNDKLRKLLEAREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTC--PTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRVGMEFNV--ACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEA 362 E GKN++L K + A N +ELPCIAH + LQ+TLET +DY+ ITSPEAA+V Q C T P +V +G+AT L+ +G + F PSKA A+VL ELP + S + RVLYPAS RA TL+DGL RG F V RLNTYDTV A+W+E + + A ++ FASPSA+K W V ACIGET+A A R+ GW EE IFYP + PG+EGW AV EA Sbjct: 54 EQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELP-------------LPSSQQPRVLYPASVRAQTTLQDGLTQRG-------------------FTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGWLLNTENNHQVLAACIGETSAKACRERGWNEEHIFYP-DKPGMEGWVDAVAEA 285
BLAST of NO16G01000 vs. NCBI_GenBank
Match: GAX18976.1 (uroporphyrinogen-III synthase [Fistulifera solaris]) HSP 1 Score: 184.9 bits (468), Expect = 4.500e-43 Identity = 113/263 (42.97%), Postives = 146/263 (55.51%), Query Frame = 0 Query: 103 GKNDKLRKLLEAREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRVGMEFN----VACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEA 362 GKN++L K + + +ELPCIAH + LQ+TL+ +DY+ ITSPEAA+V Q C P +V +G+AT L+ AG + F PSKA A+VL ELP ++ ++ +VLYPAS RA TL+DGL RG F V RLNTYDTV A W+E + +A ++ FASPSA+K W + E N ACIGET+A A R+ GW EE IFYP E PG+EGW AV EA Sbjct: 56 GKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPLPSQQ-----------QQQPKVLYPASVRAQTTLQDGLTQRG-------------------FTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGWL--LNTENNNAVLAACIGETSAKACRERGWDEEHIFYP-EKPGMEGWVNAVAEA 285
BLAST of NO16G01000 vs. NCBI_GenBank
Match: OEU12436.1 (uroporphyrinogen III synthase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 180.3 bits (456), Expect = 1.100e-41 Identity = 113/276 (40.94%), Postives = 154/276 (55.80%), Query Frame = 0 Query: 95 LVVLTREAGKNDKLRKLLE-----AREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRVGMEFNV--ACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEALQ 364 +V LTRE GKN+KLR+ +E + ++LE+PCI H + L TL +Q +DYI ITSPEAA+V L A P +V +G+AT L+ + + F PSKA AK LA EL E V GK + VLYPAS +A TL+DGL RG F VTRLNTYDT+ A W + ++ + +V FASPS++K W V ACIGET+ATA ++ GW+E +IF+P E PG++GW A+ +A++ Sbjct: 66 VVTLTREDGKNEKLREKIEEDSELMNQVDLLEMPCIEHADGCDYESLAPTLLSQRWDYIAITSPEAAKV-LASAWDGVRNDPLPVVAVGKATEARLRDSDIPVTFVPSKATAKTLAAEL-----ELVSGKS-------STNVLYPASAKAKTTLQDGLTERG-------------------FTVTRLNTYDTITATWGDDEKKSSDKVQVACFASPSSVKGWLKNTENNTRVLAACIGETSATACKELGWEENQIFFP-ENPGLDGWVEAIHKAIE 308
BLAST of NO16G01000 vs. NCBI_GenBank
Match: CBN75098.1 (uroporphyrinogen synthase, putative chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 179.1 bits (453), Expect = 2.500e-41 Identity = 123/308 (39.94%), Postives = 147/308 (47.73%), Query Frame = 0 Query: 96 VVLTREAGKNDKLRKLLEAREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLE-VAQTCPTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELP-------------------EMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRVGMEFN---------------------VACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEAL 363 V LTREAGKN KL KLL + +E+PCIAH L L Y+V+TSPEAA+VFL A+ P + +G+ATG L+ G FTPSKA + LA E+P RVLYPAS +A +TLE GL ARG FEV RLNTYDTVPA W E+ E+ A V F SPSA+K WA+R+G ACIGET+A A R+AGW E IFYP E PG+EGWA AV +AL Sbjct: 75 VALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLYPASAKAQNTLESGLRARG-------------------FEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMGXXXXXXXXXXXXXXXXXXXXXXXXLAACIGETSARACREAGWAESAIFYP-EKPGMEGWAKAVGQAL 362
BLAST of NO16G01000 vs. NCBI_GenBank
Match: XP_002287550.1 (uroporphyrinogen III synthase [Thalassiosira pseudonana CCMP1335] >EED94993.1 uroporphyrinogen III synthase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 177.9 bits (450), Expect = 5.500e-41 Identity = 115/285 (40.35%), Postives = 147/285 (51.58%), Query Frame = 0 Query: 95 LVVLTREAGKNDKLRKLLEARE------------FNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRV-GM----EFNVACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEAL 363 +V LTRE GKNDKLRK L + E +I E+PCI H +L TL + FDY+ ITSPEAA+V + + + +G+AT LK+ G + F PSKA A L ELP + K R++ + YPAS +AA TL++GL RG F+V RLNTYDTVPA W E A++ V FASPSA+K W GM ACIGET+A A R+ W E IFYP E PG++GWA +V +AL Sbjct: 66 VVALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPL--------SDAATKEGRSSTLFYPASNKAADTLQNGLEERG-------------------FDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAWLKNTDGMNKPARAKAACIGETSAEACRKNQWDESDIFYP-EKPGVDGWAVSVADAL 322
BLAST of NO16G01000 vs. NCBI_GenBank
Match: XP_002178352.1 (uroporphyrinogen-iii synthase [Phaeodactylum tricornutum CCAP 1055/1] >EEC50017.1 uroporphyrinogen-iii synthase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 176.4 bits (446), Expect = 1.600e-40 Identity = 108/272 (39.71%), Postives = 144/272 (52.94%), Query Frame = 0 Query: 96 VVLTREAGKNDKLRKLLEAR---EFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRVGMEFNV--ACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEAL 363 V +TRE G N KL K LE+R ++LE+PCIAH E +A L + L ++ +DY+ +TSP+AA + L A P + +G+AT L++ G + F PSKA+A L +ELP + RVLYPAS +A TLE+GL RG FEV RLN YDTV A W+ + A+ C+V F SPSA+ W V ACIG+T+A R GW +E IF+P + PGIEGW VEEA+ Sbjct: 50 VAVTREDGNNKKLLKALESRLAGRISVLEVPCIAHADGEDYALLAEKLRSERWDYVAVTSPQAA-IILNSAWDSVRDDPIPVTAVGKATSEALEEYGIAVSFCPSKAIATTLMLELP------------ATRVTDATRVLYPASAKARTTLENGLRERG-------------------FEVVRLNAYDTVSAHWTHIQRTNAEKCQVACFGSPSAVDGWLRNSNNNTTVLAACIGKTSADVCRDRGWPKECIFFP-DKPGIEGWINVVEEAV 288
BLAST of NO16G01000 vs. NCBI_GenBank
Match: XP_005833990.1 (Uroporphyrinogen synthase [Guillardia theta CCMP2712] >EKX47010.1 Uroporphyrinogen synthase [Guillardia theta CCMP2712]) HSP 1 Score: 169.9 bits (429), Expect = 1.500e-38 Identity = 113/268 (42.16%), Postives = 146/268 (54.48%), Query Frame = 0 Query: 96 VVLTREAGKNDKLRKLLEAREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAGAGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKACRVVTFASPSALKVWASRVGMEFNVACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEALQ 364 V LTRE GKN KL K L + +ELPCIA L L+ + ++Y+V+TSPEAA VFL+ A + + +G T L++ G F PSKA K LA ELP G +G RVLYPAS +A ++ GL ARG F VTRLNTYDTV A WSE + A + VV ASPSA+K WA R+G + ACIGET+A+A ++ G+ E +F+P E+PGI GWA AV +AL+ Sbjct: 24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALK-EDWEYVVVTSPEAASVFLD-AWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP--------GPQG------NGRVLYPASAKARTEVQGGLTARG-------------------FTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGTKQYAACIGETSASACKELGF--EHVFWP-ESPGIPGWAQAVHDALE 253
BLAST of NO16G01000 vs. NCBI_GenBank
Match: XP_010525999.1 (PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X1 [Tarenaya hassleriana]) HSP 1 Score: 163.3 bits (412), Expect = 1.400e-36 Identity = 112/278 (40.29%), Postives = 148/278 (53.24%), Query Frame = 0 Query: 96 VVLTREAGKNDKLRKLLEAREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAG------AGIKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEW-SEADESRAKACRVVTFASPSALKVWASRV----GMEFNVACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEAL 363 VV+TRE GKN KL + LE + LELP I H QL L FD+I+ITSPEA VFL+ + T + + +G T + K+A G+ FTPSKA KVLA ELP M + + VLYPAS +A++ +E+GL ARG FEV RLNTY TVP EA +A + VV+ ASPSA++VW + ++ACIGETTA+AAR+ G ++I+YP + PG+EGW + EAL Sbjct: 80 VVVTRERGKNGKLVRALEKHGISCLELPLIQHAQGPDFQQLASVLRDNTFDWIIITSPEAGSVFLDAWKAAGTPR-VKIAVVGSGTASIFKEAMQSSEGLLGVAFTPSKATGKVLASELP-------------MDVGKRSSVLYPASLKASNDIEEGLAARG-------------------FEVLRLNTYTTVPVHTVDEALLQQALSVPVVSAASPSAIRVWIDLIPDLEQWSNSIACIGETTASAARRLGL--QKIYYPTQ-PGLEGWVDCILEAL 321
BLAST of NO16G01000 vs. NCBI_GenBank
Match: GAQ79840.1 (uroporphyrinogen III synthase [Klebsormidium nitens]) HSP 1 Score: 161.4 bits (407), Expect = 5.300e-36 Identity = 116/278 (41.73%), Postives = 148/278 (53.24%), Query Frame = 0 Query: 96 VVLTREAGKNDKLRKLLEAREFNILELPCIAHCHAEGHAQLQQTLETQVFDYIVITSPEAAQVFLEVAQTCPTYKPTNLVPIGEATGVLLKKAGAG----IKFTPSKALAKVLAVELPEMEEEKVGGKEGGMKSRRTARVLYPASKRAAHTLEDGLYARGVCEEGEREAQGEREGGSRLFEVTRLNTYDTVPAEWSEADESRAKA-CRVVTFASPSALKVWASRV------GMEFNVACIGETTATAARQAGWKEERIFYPREAPGIEGWAAAVEEAL 363 VV+TRE GKN KL K L A LELP I H +L Q L+ + +D+I+ITSPEAA VFLE + K L +G TG +L++A +FTPSKA AKVLAVE+PE + +RVLYPAS +A L++GL ARG F+VTRLNTY T + + A A V TFASP+A+K W RV ACIG T+A AAR AG ++I++P ++PGIEGW +V EAL Sbjct: 97 VVVTREQGKNGKLVKALAAHGIKCLELPLIEHREGPDVHRLPQVLKEETWDWIIITSPEAATVFLEGWRAAGRPK-VRLSVVGAGTGTVLEEAPEADDLRPEFTPSKATAKVLAVEIPEPQP--------------GSRVLYPASVKAGSDLQEGLEARG-------------------FKVTRLNTYSTETVRTVDPNALAAAADAPVATFASPTAVKAWVERVCQGDVKRWSGAAACIGNTSAVAARNAGL--DKIYFP-DSPGIEGWVRSVREAL 337 The following BLAST results are available for this feature:
BLAST of NO16G01000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01000 ID=NO16G01000|Name=NO16G01000|organism=Nannochloropsis oceanica|type=gene|length=1347bpback to top protein sequence of NO16G01000.1 >NO16G01000.1-protein ID=NO16G01000.1-protein|Name=NO16G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bpback to top Synonyms
Publications
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