NO16G00940, NO16G00940 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00940 vs. NCBI_GenBank
Match: EWM23995.1 (lactoylglutathione lyase [Nannochloropsis gaditana]) HSP 1 Score: 270.4 bits (690), Expect = 4.700e-69 Identity = 138/208 (66.35%), Postives = 163/208 (78.37%), Query Frame = 0
Query: 3 LSHPVSRCCLSHVRRH-HLLLLPLPPSSAITPASFTRPYSTSSPPPRSPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAAAAA 210
LSHP + ++ H H L P + P+ RP S+S+ PRPFRVLGLQQVAIG+LDK+G +LWG+VLG+P TGT++S+ ENVDEDI R+GAP PW VEIDLMQPIDP+K+PKVHVP LNHIGLWVHPL AAVEYL+ QGVRFTPGGIR+GAAGHDVCFIHPKG+ P+SGEGVLIELVQAPP+VV AYE A+ A+
Sbjct: 8 LSHPATVRYGRRLQPHGHTLQSESPGNPTSMPS--CRPLSSSA---LLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESASVAS 210
BLAST of NO16G00940 vs. NCBI_GenBank
Match: XP_005854094.1 (lactoylglutathione lyase [Nannochloropsis gaditana CCMP526] >EKU22261.1 lactoylglutathione lyase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 268.9 bits (686), Expect = 1.400e-68 Identity = 129/172 (75.00%), Postives = 147/172 (85.47%), Query Frame = 0
Query: 38 RPYSTSSPPPRSPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAAAAA 210
RP S+S+ PRPFRVLGLQQVAIG+LDK+G +LWG+VLG+P TGT++S+ ENVDEDI R+GAP PW VEIDLMQPIDP+K+PKVHVP LNHIGLWVHPL AAVEYL+ QGVRFTPGGIR+GAAGHDVCFIHPKG+ P+SGEGVLIELVQAPP+VV AYE A A
Sbjct: 5 RPLSSSA---LLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSELENVDEDIFRVGAPDCPWAVEIDLMQPIDPAKAPKVHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVVRAYESAVETA 173
BLAST of NO16G00940 vs. NCBI_GenBank
Match: WP_028873974.1 (VOC family protein [Tepidiphilus margaritifer]) HSP 1 Score: 235.3 bits (599), Expect = 1.700e-58 Identity = 109/160 (68.12%), Postives = 133/160 (83.12%), Query Frame = 0
Query: 49 SPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAAAA 209
SPRPFR+LG+QQ+A+G+LDK L++LW E+ G+P TGTFRS++ENVDEDI+ LGA P+ VE+DLMQP+DP K P VH PLNH+GLWV L AVE+L+A GVRF PGGIR+GAAG+D+CFIHPKG+ PVSGEGVLIELVQAPP+V+EAY AAA
Sbjct: 4 SPRPFRILGIQQIALGALDKTRLARLWVELFGLPVTGTFRSERENVDEDIVALGA--GPFKVEVDLMQPLDPEKKPAVHATPLNHVGLWVDDLPKAVEWLSAHGVRFAPGGIRRGAAGYDICFIHPKGNDEFPVSGEGVLIELVQAPPEVIEAYATIAAA 161
BLAST of NO16G00940 vs. NCBI_GenBank
Match: WP_055422410.1 (VOC family protein [Tepidiphilus thermophilus] >CUB04654.1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [Tepidiphilus thermophilus]) HSP 1 Score: 234.6 bits (597), Expect = 2.900e-58 Identity = 109/162 (67.28%), Postives = 134/162 (82.72%), Query Frame = 0
Query: 49 SPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAAAAAK 211
S RPFR+LG+QQ+A+G+LDK L++LW E+ G+P TGTFRS++ENVDEDI+ LGA P+ VE+DLMQP+DP K P VH PLNH+GLWV L AVE+L+A GVRF PGGIR+GAAG+D+CFIHPKG+ PVSGEGVLIELVQAPP+V+EAY AAAA+
Sbjct: 4 SSRPFRILGIQQIALGALDKTRLARLWVELFGLPVTGTFRSERENVDEDIVALGA--GPFKVEVDLMQPLDPEKKPAVHATPLNHVGLWVDDLPKAVEWLSAHGVRFAPGGIRRGAAGYDICFIHPKGNDEFPVSGEGVLIELVQAPPEVIEAYATIAAAAR 163
BLAST of NO16G00940 vs. NCBI_GenBank
Match: WP_034435298.1 (VOC family protein [Candidatus Contendobacter odensis] >CDH46607.1 Lactoylglutathione lyase [Candidatus Contendobacter odensis Run_B_J11]) HSP 1 Score: 231.5 bits (589), Expect = 2.400e-57 Identity = 108/158 (68.35%), Postives = 134/158 (84.81%), Query Frame = 0
Query: 49 SPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAA 207
S RPF+VLG+QQ+AIG LDK LSKLW + LG+ TG FRS++ENVDEDI +G+ P+ VE+DLMQPIDP+K+PKVH P LNHIGLW+ LAAAVE+LTA+G+RFTPGGIRKGAAG+DVCF+HPKG+ A P+ GEGVLIEL+QAPP+V+EA+ + A
Sbjct: 2 SDRPFKVLGIQQIAIGGLDKTKLSKLWIDTLGLTLTGNFRSERENVDEDIAAIGS--GPFKVEVDLMQPIDPTKAPKVHEPQLNHIGLWISDLAAAVEWLTAKGMRFTPGGIRKGAAGYDVCFLHPKGNDATPLCGEGVLIELIQAPPEVIEAFAKVA 157
BLAST of NO16G00940 vs. NCBI_GenBank
Match: WP_048676775.1 (VOC family protein [Candidatus Competibacter denitrificans] >CDI04529.1 conserved hypothetical protein [Candidatus Competibacter denitrificans Run_A_D11]) HSP 1 Score: 229.2 bits (583), Expect = 1.200e-56 Identity = 106/158 (67.09%), Postives = 133/158 (84.18%), Query Frame = 0
Query: 49 SPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAA 207
S RPF+VLG+QQ+AIG LDK LS+LW + LG+ TG FRS++ENVDEDI +G+ P+ VE+DLMQPIDP+K+PKVH P LNHIGLW+ L AAVE+LT +G+RFTPGGIRKGAAG+DVCF+HPKG+ A P+SGEGVLIEL+QAPP+V+EA+ + A
Sbjct: 2 SDRPFKVLGIQQIAIGGLDKTKLSRLWVDTLGLTMTGNFRSERENVDEDIAAIGS--GPFKVEVDLMQPIDPAKAPKVHEPQLNHIGLWISDLKAAVEWLTTKGMRFTPGGIRKGAAGYDVCFLHPKGNEATPLSGEGVLIELIQAPPEVIEAFAKVA 157
BLAST of NO16G00940 vs. NCBI_GenBank
Match: PKN55073.1 (lactoylglutathione lyase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14]) HSP 1 Score: 226.9 bits (577), Expect = 6.000e-56 Identity = 111/161 (68.94%), Postives = 132/161 (81.99%), Query Frame = 0
Query: 49 SPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAAAAA 210
S RPFR+LGLQQVAIG DKA L+ LW +LG+P GT+RS++ENVDEDILRLGA P VE+DLM+PIDP+++PKVHVP LNH+GLWV L AAV++LT QGVRFTPGGIRKGAAG+DVCFIHPKG+ A P SGEGVLIEL+QAP +V+ A + AA
Sbjct: 2 STRPFRILGLQQVAIGGEDKARLTHLWEGLLGVPRVGTYRSERENVDEDILRLGA--GPLAVEVDLMEPIDPTRAPKVHVPALNHLGLWVDDLTAAVKWLTEQGVRFTPGGIRKGAAGYDVCFIHPKGNDAAPHSGEGVLIELIQAPAEVITATSTSGRAA 160
BLAST of NO16G00940 vs. NCBI_GenBank
Match: EJK55585.1 (hypothetical protein THAOC_24674 [Thalassiosira oceanica]) HSP 1 Score: 225.7 bits (574), Expect = 1.300e-55 Identity = 115/188 (61.17%), Postives = 138/188 (73.40%), Query Frame = 0
Query: 17 RHHLLLLPLPPSSAITPASFTRPYSTSSPPPRSPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEE 205
RHH +L + + T + P+ S P + RPFRV+GLQQVAIG +K LS LW VLG+P G +RS++ENVDEDIL LG G P VE+DLM P+D +KSPKV+VPPLNHIGLWV L AVE+L +GVRFTPGGIRKGA+GHDV FIHPKG+ P+ GEGVLIELVQAPP+V+EA EE
Sbjct: 13 RHHDVL-----TKSSTSIASATPHRQQSGQP-TERPFRVIGLQQVAIGGRNKTSLSNLWTTVLGVPKVGDYRSERENVDEDILLLGREGCPHAVEVDLMMPLDETKSPKVNVPPLNHIGLWVDRLPEAVEWLEGRGVRFTPGGIRKGASGHDVTFIHPKGNEVTPIGGEGVLIELVQAPPEVIEASEE 194
BLAST of NO16G00940 vs. NCBI_GenBank
Match: XP_002288440.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93876.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 225.3 bits (573), Expect = 1.700e-55 Identity = 108/153 (70.59%), Postives = 123/153 (80.39%), Query Frame = 0
Query: 49 SPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEA 202
S +PF+VLGLQQ+AIGSLD + LS LW ++ G+ G F+S+KENVDEDILRLG GSP VEIDLM PIDP KSPKVHVP LNHIGLWV L AAVE++ QGVRFTPGGIRKGAAGHDV FIHPKG+ P+ G GVLIELVQAP V++A
Sbjct: 65 STKPFQVLGLQQIAIGSLDNSSLSHLWCDIFGVSKIGNFKSEKENVDEDILRLGKEGSPHAVEIDLMMPIDPEKSPKVHVPSLNHIGLWVDDLPAAVEWMANQGVRFTPGGIRKGAAGHDVTFIHPKGNEKSPIGGGGVLIELVQAPQNVIDA 217
BLAST of NO16G00940 vs. NCBI_GenBank
Match: WP_076504534.1 (VOC family protein [Pseudacidovorax sp. RU35E]) HSP 1 Score: 222.6 bits (566), Expect = 1.100e-54 Identity = 106/164 (64.63%), Postives = 128/164 (78.05%), Query Frame = 0
Query: 46 PPRSPRPFRVLGLQQVAIGSLDKAGLSKLWGEVLGIPTTGTFRSDKENVDEDILRLGAPGSPWDVEIDLMQPIDPSKSPKVHVPPLNHIGLWVHPLAAAVEYLTAQGVRFTPGGIRKGAAGHDVCFIHPKGSPAMPVSGEGVLIELVQAPPKVVEAYEEAAAAA 210
P RPF+VLG+QQ+AIG DK L+ LW ++LG+ TGTFRS++ENVDEDI +G+ P+ VE+DLMQP+DP K P VH PLNH+GLW+ L AVE+LTAQGVRF PGGIR+GAAG D+CF+HPKGS PVSGEGVLIELVQAPP+VV A+ AAAA
Sbjct: 2 PMNKERPFKVLGVQQIAIGGADKQRLATLWVDMLGLEVTGTFRSERENVDEDICAIGS--GPFKVEVDLMQPLDPEKKPAVHATPLNHVGLWIDDLPRAVEWLTAQGVRFAPGGIRRGAAGFDICFLHPKGSDEFPVSGEGVLIELVQAPPEVVNAFGAMAAAA 163 The following BLAST results are available for this feature:
BLAST of NO16G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00940 ID=NO16G00940|Name=NO16G00940|organism=Nannochloropsis oceanica|type=gene|length=745bpback to top protein sequence of NO16G00940.1 >NO16G00940.1-protein ID=NO16G00940.1-protein|Name=NO16G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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