NO16G00680, NO16G00680 (gene) Nannochloropsis oceanica

Overview
NameNO16G00680
Unique NameNO16G00680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2079
Alignment locationchr16:235260..237338 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosomal rna large subunit methyltransferase i
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:235260..237338 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0003723RNA binding
GO:0016740transferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_domain
IPR029063SAM-dependent_MTases
IPR019614SAM-dep_methyl-trfase
IPR002478PUA
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
BLAST of NO16G00680 vs. NCBI_GenBank
Match: EWM24066.1 (ribosomal rna large subunit methyltransferase i [Nannochloropsis gaditana])

HSP 1 Score: 488.8 bits (1257), Expect = 1.600e-134
Identity = 256/350 (73.14%), Postives = 276/350 (78.86%), Query Frame = 0
Query:   12 LTTSISMLLMVRRTFAFA-PLIQ--QSSRAWTASTTGLSGSKAATATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEVEPSDRIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARERGEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            LTTS+S+LL  RR  AFA P I    SSR WT+        ++ATA A                                    ETEVEP+ RIQRDYPHVVLRAGKARLFLEGNPLVYGEAVH+VVG VADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARE+GEA YA+SLED+V RRVSTAWATRQALGLPN ETTCFRLVNGEGD+LSGLAADVFDKVCVVSSSSLWCE+HK  II GL+  LGP+GI TVWRRSEARL QDGF D EE ++P +DVKAEA+KEGA VW KEAG+KYKVYPELGQKTGFYCDQRQNRQMIQSLS+GKRVLDLFCYTGGFALN
Sbjct:   12 LTTSLSLLLATRRAAAFALPAIPFFHSSRGWTSVIP--VRDQSATARA---------HKSSRKGGQYSVREGQEHRTSTRPRARETEVEPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALN 350          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: XP_005842209.1 (hypothetical protein GUITHDRAFT_131479 [Guillardia theta CCMP2712] >EKX55229.1 hypothetical protein GUITHDRAFT_131479 [Guillardia theta CCMP2712])

HSP 1 Score: 199.9 bits (507), Expect = 1.500e-47
Identity = 115/273 (42.12%), Postives = 159/273 (58.24%), Query Frame = 0
Query:  109 VVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARERGEASYAA--SLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFE--------------DKEEGVKPFVDVKAEAQKEGASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGF----ALNGKT 362
            VVL+ GK++LF +GNP+V+G AV                  +G L+G G YNS SMYRVR+LW     G++      ++ +++ +R++ A A R AL LP++ET  +RL+NGEGDRLSG+A DV+    V+SSS+ W E HK  I+  +  V+ P   + VWR+S  RL QDGF+               +E+  K  +   A  Q+   S  + E G+K+ V P+LGQKTG Y DQR NR ++  L KGK VLD FCY+GGF    ALNG T
Sbjct:   99 VVLQPGKSKLFYDGNPVVFGGAV------------------QGKLVGWGLYNSDSMYRVRMLWLESMDGKSDDEKDFTMFNIIKKRLTNAAAIRSALSLPDEETNAYRLINGEGDRLSGVAIDVYSNWVVISSSARWVEIHKDVIMEAVKAVV-PVTSEVVWRQSIDRLRQDGFDIPTRASRSNADEELQEEDLDKDEISEPAGKQESAESTIISEYGVKFVVSPKLGQKTGHYLDQRDNRYVLGKLCKGKSVLDTFCYSGGFSLHAALNGAT 352          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: KOO35971.1 (ribosomal RNA large subunit methyltransferase i-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 197.2 bits (500), Expect = 9.500e-47
Identity = 113/275 (41.09%), Postives = 155/275 (56.36%), Query Frame = 0
Query:  109 VVLRAGKARLFLE-GNPLVYGEAVHDVVGDVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARERGEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGAS------------------------VWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            V L+AGKARLF   G+PLV+  AV  V+GD   G  V+VVD +  L+G G +N  SMYRVRLL    E    ++   L  +++ R+  A   R AL LP+ ETT +RL+N EGDRLSGL  DVF    V  +S++W E+    ++  L  +  P   + VWRRS+ RL QDG+E     V+   + ++       +                        V + E+G+KY V P LGQK+GFYCDQR NR+ +  L + KRVLDLFCY+GGF+L+
Sbjct:   35 VRLQAGKARLFKNAGHPLVFSGAVDKVLGDPEPGAIVDVVDGKDGLVGWGVFNPHSMYRVRLLATPEEPALIAH-RDLRKLISHRLEAALKLRAALSLPSPETTAYRLINSEGDRLSGLTVDVFGGTAVAVTSAMWLEQRSDMVVECLRAL--PGITEVVWRRSDGRLQQDGWEVPNAKVEEVEEHQSLTDDSPTAXXXXXXXXXXXXXXXXXXXXXXLPVLIYESGVKYLVAPVLGQKSGFYCDQRDNRRQLAELCRDKRVLDLFCYSGGFSLS 306          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: XP_017242195.1 (PREDICTED: ribosomal RNA large subunit methyltransferase I [Daucus carota subsp. sativus])

HSP 1 Score: 195.3 bits (495), Expect = 3.600e-46
Identity = 117/256 (45.70%), Postives = 155/256 (60.55%), Query Frame = 0
Query:  109 VVLRAGKARLFLEGNPLVYGEAVHDVVG--DVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARER-GEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAI---IAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            VVL+ GK ++F EG+P+VY  AV  ++G      GD V V D     IG G YNS SM+ VR++    E  G+   A ++E +V RR+  A   R+ LGLP+K T  +RLVN EGDRLSGL  D+F  V V++SS+ W EK+K  I   I  LD +         WRRS   L ++G +     +   V+V+  A  E  SV V E GI Y +  E GQKTGFY DQR+NRQ I+++S+G+RVLD+ CYTGGFALN
Sbjct:   37 VVLKKGKTQIFREGSPMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRIMQLEEEAIGDPLCALNMEKLVERRIDAAVKLRKNLGLPSKNTNTYRLVNSEGDRLSGLIIDIFGDVAVIASSAAWVEKYKPQIEGCIGRLDAI-----TNICWRRSTEILKEEGID-----LSNLVEVQPSASTE--SVKVVENGISYVISLE-GQKTGFYADQRENRQFIRNISEGQRVLDMCCYTGGFALN 279          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: XP_009033531.1 (hypothetical protein AURANDRAFT_2373, partial [Aureococcus anophagefferens] >EGB11701.1 hypothetical protein AURANDRAFT_2373, partial [Aureococcus anophagefferens])

HSP 1 Score: 194.9 bits (494), Expect = 4.700e-46
Identity = 115/266 (43.23%), Postives = 148/266 (55.64%), Query Frame = 0
Query:  109 VVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWH--ARERGEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGL----DTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN----GKTEEK 365
            V L  GK++LF +GNPL++  AV    GD   GD V+VVD     +G G YN  SMYRVRLL    A E  EA   A+++ +    +  A + R+AL LP  +T  FR VN EGD LSGL  D F  V V   S++W E  +  + A L    + + G S  + +WRR+EARL QDG+           D +A+    G     KE G+ Y+V    GQKTGFYCDQR NR  +  L  GK VLDL+CY+GGFALN    G TE +
Sbjct:    1 VTLGRGKSKLFRKGNPLIFAGAVSSTAGDPQRGDVVDVVDGANQNVGWGTYNPDSMYRVRLLGRGGAAETNEARVGAAVKAL----LGAAASRRRALDLPRADTDVFRFVNSEGDGLSGLTVDAFGDVLVCQISAVWLESRRAVVEAALREAYEGLTGISDARVLWRRAEARLRQDGW-----------DGEADEMASGDRFAAKEGGLAYEV-DVFGQKTGFYCDQRDNRAFLGPLCAGKSVLDLYCYSGGFALNAAKHGATEAR 250          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: XP_001422128.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABP00445.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 194.1 bits (492), Expect = 8.100e-46
Identity = 108/254 (42.52%), Postives = 153/254 (60.24%), Query Frame = 0
Query:  109 VVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARERGEASYAASLEDMVTRRVSTAWATRQALGL-PNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGA---SVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            VV+  GKA +FL+GNP+VY  A+  V G+   GD+V+V DH  + I  G YN  S Y VR L  A ERG        + +V +R+  A+  R+ LGL  N+ TTC+RL+N EGD++SGL ADV+ ++ V SS++ W E+ +  I+     VLG +  K VWRR E     +G   + E +  + D    A+   A    V V E G++Y +    G KTGFY DQR NR++++ +++GKRVLD+ CYTGGFALN
Sbjct:   84 VVVARGKANMFLDGNPIVYAGAIERVEGEARTGDWVQVTDHALSPICYGFYNETSSYSVRALSQAWERG----CEDGDGVVAQRIREAYELRRDLGLVGNERTTCYRLLNSEGDKISGLNADVYGEIVVASSTAAWVEQRRDVILRAFADVLG-ANTKVVWRRDEKMYEVEGTPWEGENLIDYYDAATGAKVGEAVPSDVKVLEDGVQYAIDIAGGHKTGFYVDQRDNRKVMREIARGKRVLDVCCYTGGFALN 332          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: XP_010693390.1 (PREDICTED: uncharacterized protein LOC104906348 isoform X1 [Beta vulgaris subsp. vulgaris] >KMS99116.1 hypothetical protein BVRB_2g047590 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 190.3 bits (482), Expect = 1.200e-44
Identity = 114/253 (45.06%), Postives = 154/253 (60.87%), Query Frame = 0
Query:  109 VVLRAGKARLFLEGNPLVYGEAVHDVVG--DVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARER-GEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            VVL+ GK +LF  G+P+VY  AV  ++G      GD V V D     IG G YNS SM+ VRL+    E   + + A ++E ++ +R++ A   R+ LG+P+  T  FRLVN EGDRLSGL  DVF  V VV+SS+ W E++K  I + ++ V G S I   WR S   L ++G +         + +K       A V V+E+GIKY V  E GQKTGFY DQR+NRQ I +++KGKRVLD+ CY+GGFALN
Sbjct:   40 VVLKKGKTQLFRYGSPMVYSGAVDRIIGRPPPKTGDIVLVADGAEKSIGWGLYNSVSMFCVRLMQLEEEALRDPTCAFNMESLLEQRINAATDLRRHLGIPSTNTNAFRLVNSEGDRLSGLIVDVFGDVAVVASSAAWVERYKLEIESCINKVDGISHIN--WRPSIDILKEEGLD--------LLQLKHTPASPLAQVEVRESGIKYAVSLE-GQKTGFYADQRENRQFISTIAKGKRVLDVCCYSGGFALN 281          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: ESQ29843.1 (hypothetical protein EUTSA_v10011478mg [Eutrema salsugineum])

HSP 1 Score: 189.9 bits (481), Expect = 1.500e-44
Identity = 117/268 (43.66%), Postives = 157/268 (58.58%), Query Frame = 0
Query:   99 SDRIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHDVVG--DVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRL--LWHARERGEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGAS----VWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            S ++      VVL+ GK +LF +G+P+VY  AV  ++G      GD V V D   N IG G YNS SM+ VRL  L H   R +   A ++E +V  R++ A   R +LGLP+  T  +RLVN EGDRLSGL  DVF  + VV+SS+ W EK++  + A L +V G + I   WR S   L +DGF           D+ +  Q + ++    + V E GI Y +  E GQKTGFY DQR+NR +I ++S GKRVLDL CY+GGFALN
Sbjct:   34 SSKVNSGVAKVVLKKGKTQLFKDGSPMVYSGAVDRIIGKPPPQTGDVVIVADGSENPIGWGLYNSVSMFCVRLMQLQHESTR-DPCCALNIEKLVEARITQALELRNSLGLPSATTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRSQVEACLRSVHGINHIN--WRPSLDVLKEDGF-----------DISSLKQTQSSNLPQRLMVVENGISYAISLE-GQKTGFYTDQRENRHLISTISAGKRVLDLCCYSGGFALN 286          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: XP_006392557.2 (uncharacterized protein LOC18010863 [Eutrema salsugineum])

HSP 1 Score: 189.9 bits (481), Expect = 1.500e-44
Identity = 117/268 (43.66%), Postives = 157/268 (58.58%), Query Frame = 0
Query:   99 SDRIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHDVVG--DVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRL--LWHARERGEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGAS----VWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            S ++      VVL+ GK +LF +G+P+VY  AV  ++G      GD V V D   N IG G YNS SM+ VRL  L H   R +   A ++E +V  R++ A   R +LGLP+  T  +RLVN EGDRLSGL  DVF  + VV+SS+ W EK++  + A L +V G + I   WR S   L +DGF           D+ +  Q + ++    + V E GI Y +  E GQKTGFY DQR+NR +I ++S GKRVLDL CY+GGFALN
Sbjct:   48 SSKVNSGVAKVVLKKGKTQLFKDGSPMVYSGAVDRIIGKPPPQTGDVVIVADGSENPIGWGLYNSVSMFCVRLMQLQHESTR-DPCCALNIEKLVEARITQALELRNSLGLPSATTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRSQVEACLRSVHGINHIN--WRPSLDVLKEDGF-----------DISSLKQTQSSNLPQRLMVVENGISYAISLE-GQKTGFYTDQRENRHLISTISAGKRVLDLCCYSGGFALN 300          
BLAST of NO16G00680 vs. NCBI_GenBank
Match: OAY83069.1 (Ribosomal RNA large subunit methyltransferase I [Ananas comosus])

HSP 1 Score: 189.5 bits (480), Expect = 2.000e-44
Identity = 112/253 (44.27%), Postives = 152/253 (60.08%), Query Frame = 0
Query:  109 VVLRAGKARLFLEGNPLVYGEAVHDVVG--DVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHARE-RGEASYAASLEDMVTRRVSTAWATRQALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKAIIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKEGASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFCYTGGFALN 359
            VVL+ GKA++F +GNP+VY  AV  ++G      GD V V D  G  IG G YNS SM+ VRL+    E + + S A ++E ++  R+  A   RQ+LGLP+ +T  +RL+N EGDRLSGL  D+F  V V++SS+ W EK++K I   +  V   + IK  WR S   L ++G +  E+         +        V V E+GI Y V  + GQKTGFY DQR+NR +I  LSK +RVLDL CY+GGFALN
Sbjct:   59 VVLKKGKAQIFRDGNPMVYSGAVDRIIGRPPPRTGDVVLVADGSGKPIGWGLYNSVSMFCVRLMQLEEEAKRDPSCALNMEKLLETRIFAAIDLRQSLGLPSADTNAYRLINSEGDRLSGLIVDIFSDVAVIASSAAWVEKYRKEIEFLVGNVSAVNHIK--WRSSTDILKEEGLDLSEQN-------DSSPSPCSGKVKVVESGICYSVSLD-GQKTGFYADQRENRHLISLLSKDRRVLDLCCYSGGFALN 301          
The following BLAST results are available for this feature:
BLAST of NO16G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24066.11.600e-13473.14ribosomal rna large subunit methyltransferase i [N... [more]
XP_005842209.11.500e-4742.12hypothetical protein GUITHDRAFT_131479 [Guillardia... [more]
KOO35971.19.500e-4741.09ribosomal RNA large subunit methyltransferase i-li... [more]
XP_017242195.13.600e-4645.70PREDICTED: ribosomal RNA large subunit methyltrans... [more]
XP_009033531.14.700e-4643.23hypothetical protein AURANDRAFT_2373, partial [Aur... [more]
XP_001422128.18.100e-4642.52predicted protein [Ostreococcus lucimarinus CCE990... [more]
XP_010693390.11.200e-4445.06PREDICTED: uncharacterized protein LOC104906348 is... [more]
ESQ29843.11.500e-4443.66hypothetical protein EUTSA_v10011478mg [Eutrema sa... [more]
XP_006392557.21.500e-4443.66uncharacterized protein LOC18010863 [Eutrema salsu... [more]
OAY83069.12.000e-4444.27Ribosomal RNA large subunit methyltransferase I [A... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003055NSK003055Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00680.1NO16G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G00680.2NO16G00680.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G00680.3NO16G00680.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593225gene_5947Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100063g20gene6411Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00680.1NO16G00680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G00680.2NO16G00680.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G00680.3NO16G00680.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00680 ID=NO16G00680|Name=NO16G00680|organism=Nannochloropsis oceanica|type=gene|length=2079bp
CTGGCCCACACGTACTCAACGCTCTTTCATGCATACTCGATAGCTATGAA
GCATCGCGAGACTTCCTGCGTCATGCTCTTGACCACGTCCATTTCAATGC
TGCTCATGGTCCGTCGGACTTTTGCCTTTGCGCCCTTGATCCAACAATCC
TCACGGGCTTGGACGGCGTCTACGACTGGCCTTTCCGGGAGTAAAGCGGC
CACAGCCACCGCCCACAGCAGCAGCCGCGTTGGTTATGGTGGTGGAGGAG
GTGGAGGAGGCAGCGATTATCGTGGTGGCGGTGGTGGGGGACAGCGCACG
TCTTCCCGTCCGCCTCCCCGTGAGACTGAGGTCGAGCCCTCCGACAGGAT
CCAGAGGGATTATCCGCATGTCGTGCTACGGGCAGGAAAGGCTCGCTTGT
TTTTGGAGGGCAATCCGTTGGTATACGGAGAAGCCGTCCATGATGTGGTA
GGAGACGTGGCGGATGGTGATTTTGTGGAGGTGGTGGACCATAGAGGCAA
TTTGATTGGCAAGGGGTGCTACAATTCCCAGAGCATGTACCGTGTCCGTC
TCCTGTGGCATGCCCGCGAGCGAGGGGAGGCATCATATGCGGCTTCTTTG
GAGGATATGGTCACACGGCGGGTGAGCACGGCATGGGCAACGAGGCAGGC
GTTGGGGCTGCCGAACAAGGAGACGACGTGCTTTCGGTTGGTGAATGGGG
AGGGAGATCGATTGAGTGGGCTGGCCGCCGATGTCTTTGACAAGGTCTGT
GTCGTGTCCAGCAGTTCATTGTGGTGCGAGAAGCATAAAAAGGCGATTAT
CGCGGGATTGGACACTGTGCTGGGCCCGTCGGGGATCAAGACGGTTTGGC
GTCGGAGCGAGGCGAGATTGTCGCAGGATGGGTTCGAGGACAAGGAGGAG
GGCGTGAAGCCCTTCGTTGACGTCAAGGCGGAAGCACAAAAGGAGGGGGC
CTCTGTGTGGGTGAAGGAGGCGGGTATCAAATACAAGGTCTACCCAGAGC
TGGGGCAAAAGACGGGATTTTACTGTGATCAGCGTCAGAACCGGCAGATG
ATCCAGAGTCTGTCCAAGGGAAAGCGGGTGCTGGATCTCTTTTGTTATAC
GGGTGGCTTTGCATTGAATGgtaagacggaagagaagagagggaggaagg
ttgagtgtgtgaagaacgccatcaatttttgctttttgtctgttttcatg
ttgatacctagaattgctgcagggggttagtggactttcacgagaccgca
tcagcattctccccttttaggttttcgtacccctgtcccctttttcctca
ttatccccccacaactctactctgttacagCGGCCAAAGGCGGGGCCAAG
GAAGTTGTCGGTGTCGACAGCTCCGCACTCGCCGTGGAGACTGCGATTGA
GAACGCGGCGGCCAATGGATTAGAAGGCAAGACCTCTTTTATCAAATCAG
ACGTGCTGGTCTATGCCCGCGGGCTAGGCGAAGGAGGCGAGCGTTCGTTT
GACATTATAATTGCGGATCCCCCCAAGCTGGCACCGACTCGACGGGACTT
GCCAAGGGCATTGCACAAATACCTGAAGATCAATCGGGCGGCGTTCCGGA
TGGTGAAGAGTGGGGGGTTAGTGCTGACGCACACCTGCTCGGCGGCCTTA
ACGCAGGAACCGGAAGAGTTCAGGAAGATGGTCAATCAGGCGgtaagttt
gggtcgtaagaacataggagaggagaaattatatttagaatgggcggaat
tgaaaattagatttcatcacattagcttacctatctattgcttcccttcg
tcaactaatttgtccacacagGCCAATGATGTTGGCCGCTCTATCACCAT
CCTCCAAACCAGCCATGCCGCCCCTTGCCACGTGCAATCGGCTGTGTACG
GAGAGTCCAACTATCTGACAGCCATGCTTGTTGCCGTATTCTGAACCGAG
AAAAAGTCAAAGCTTAAAGAAAAACGGACACAAAGAAAGCAAATGTATTA
TTCAAGGCGCCGGCGTTTATGATCTTGATAAAGGAAGCACCAAGATCAAA
TAAGAAAGAATCTATGTTGCTTATGCTGA
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protein sequence of NO16G00680.1

>NO16G00680.1-protein ID=NO16G00680.1-protein|Name=NO16G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=520bp
MKHRETSCVMLLTTSISMLLMVRRTFAFAPLIQQSSRAWTASTTGLSGSK
AATATAHSSSRVGYGGGGGGGGSDYRGGGGGGQRTSSRPPPRETEVEPSD
RIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHR
GNLIGKGCYNSQSMYRVRLLWHARERGEASYAASLEDMVTRRVSTAWATR
QALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKA
IIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKE
GASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFC
YTGGFALNAAKGGAKEVVGVDSSALAVETAIENAAANGLEGKTSFIKSDV
LVYARGLGEGGERSFDIIIADPPKLAPTRRDLPRALHKYLKINRAAFRMV
KSGGLVLTHTCSAALTQEPEEFRKMVNQAANDVGRSITILQTSHAAPCHV
QSAVYGESNYLTAMLVAVF*
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protein sequence of NO16G00680.2

>NO16G00680.2-protein ID=NO16G00680.2-protein|Name=NO16G00680.2|organism=Nannochloropsis oceanica|type=polypeptide|length=563bp
MKHRETSCVMLLTTSISMLLMVRRTFAFAPLIQQSSRAWTASTTGLSGSK
AATATAHSSSRVGYGGGGGGGGSDYRGGGGGGQRTSSRPPPRETEVEPSD
RIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHR
GNLIGKGCYNSQSMYRVRLLWHARERGEASYAASLEDMVTRRVSTAWATR
QALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKA
IIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKE
GASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFC
YTGGFALNAAKGGAKEVVGVDSSALAVETAIENAAANGLEGKTSFIKSDV
LVYARGLGEGGERSFDIIIADPPKLAPTRRDLPRALHKYLKINRAAFRMV
KSGGLVLTHTCSAALTQEPEEFRKMVNQAVSLGRKNIGEEKLYLEWAELK
IRFHHISLPIYCFPSSTNLSTQANDVGRSITILQTSHAAPCHVQSAVYGE
SNYLTAMLVAVF*
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protein sequence of NO16G00680.3

>NO16G00680.3-protein ID=NO16G00680.3-protein|Name=NO16G00680.3|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MKHRETSCVMLLTTSISMLLMVRRTFAFAPLIQQSSRAWTASTTGLSGSK
AATATAHSSSRVGYGGGGGGGGSDYRGGGGGGQRTSSRPPPRETEVEPSD
RIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHR
GNLIGKGCYNSQSMYRVRLLWHARERGEASYAASLEDMVTRRVSTAWATR
QALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKA
IIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKE
GASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFC
YTGGFALNGKTEEKRGRKVECVKNAINFCFLSVFMLIPRIAAGG*
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Synonyms
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