NO16G00670, NO16G00670 (gene) Nannochloropsis oceanica

Overview
NameNO16G00670
Unique NameNO16G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2669
Alignment locationchr16:232483..235151 -

Link to JBrowse

Properties
Property NameValue
DescriptionProlyl 4-hydroxylase, alpha subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:232483..235151 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0031418L-ascorbic acid binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506iron ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR006620Pro_4_hyd_alph
Homology
BLAST of NO16G00670 vs. NCBI_GenBank
Match: EWM24063.1 (Prolyl 4-hydroxylase, alpha subunit [Nannochloropsis gaditana])

HSP 1 Score: 642.5 bits (1656), Expect = 1.500e-180
Identity = 324/551 (58.80%), Postives = 403/551 (73.14%), Query Frame = 0
Query:  120 LAAGVYFGMKHQSQGVDLADSVSSFLHEGRSDSITARAPTLATPSLASSSQQEQHMAGTPMKARKKQRQSKQEGQECATTSRLALFLSRNVTVHICRNGQSIPMGTLYLTPSSTRCLDDLRNAVGDLLPACVPGACRLFDRYGYEIKALGALQDEQLLFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSNHDFDSAREGGTNRFATVLLYLTDVEQGGETVFPHGYKLEGETLSKKEALAKAKALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEFSSSVGGVALFWEETRWGEMGPGLPAVKAITYQNHKWNVRREEGGEGGEVLVAWEIKTAEAVEGVVKFNYAG 671
            +A     G++HQSQG+DLAD++ + L +       +  P+L+    A    + Q       + ++++R SK+         RLA  LSRN+TV I  NG+S P G+LYL P +T  +++L++AVG ++ AC  G CR+FDRYGYEIKALGAL DEQLLFAV P RHF+WPAFE+GH+VAVPGVTSS+PG PI LETLS+SPRVF++ENFLS +DA+++IE  LGITA GFALKRSTTG +G+ VSSQRTSENAFDTTSP+AMKLKRRVFDLLGMRPYVETWADGLQVLRYN SKAYI H+DYLE +  ++H+FDSA  GGTNRFATVLLYLTDVE+GGETVFP G  LE E  + +E  A+A+A G  A L+PGSW+EEM   CI+RLAVKP+K RAVLFYSQ+ DG  D+RSLHGACPV+KGVKWAANLWVWNGPR+G                                 +G+++A FSS+V GVAL+WE TRWG+MGPG   +KA+TYQ HKWNVRR+EG E G VL +W I+  +A +G++K+ Y G
Sbjct:   64 MAIAFALGLQHQSQGMDLADNIINLLQD--YSGAVSDVPSLSNWDAAQMPHKAQ-------RQKQRRRTSKE------VNRRLAPTLSRNMTVLIHDNGESTPAGSLYLEPKTTTSIEELKSAVGLVIDACHGGTCRVFDRYGYEIKALGALHDEQLLFAVPPSRHFVWPAFEIGHRVAVPGVTSSLPGHPIILETLSDSPRVFMLENFLSAEDADEVIETTLGITAAGFALKRSTTGTQGAVVSSQRTSENAFDTTSPVAMKLKRRVFDLLGMRPYVETWADGLQVLRYNASKAYIPHMDYLEFDSNADHNFDSASPGGTNRFATVLLYLTDVEEGGETVFPLGEPLEKEMRTTQEVQAEARARGRAADLKPGSWEEEMTETCISRLAVKPRKGRAVLFYSQHPDGRPDERSLHGACPVVKGVKWAANLWVWNGPRFG-----------------------HSATSLAKEAEGKIQAVFSSAVEGVALYWETTRWGKMGPGEAELKAMTYQGHKWNVRRDEGDEHGAVLASWTIEAEKAEDGIIKYRYEG 576          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: EWM25834.1 (Prolyl 4-hydroxylase, alpha subunit [Nannochloropsis gaditana])

HSP 1 Score: 323.6 bits (828), Expect = 1.500e-84
Identity = 176/388 (45.36%), Postives = 237/388 (61.08%), Query Frame = 0
Query:  254 ACRLFDRYGYEIKALGALQDEQLLFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGS-EVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSNHDFDSAREGGTNRFATVLLYLTDVEQGGETVFPHGYKLEGETLSKKEALAKAKALGL---TAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEFSSSVGGVALFWEETRWGEMGPGLPAVKAITYQNHKWNV 638
            +CR+F   G+E+     L D+  L+ V   R F+WP F+ GH+V V  V S   G+PI +ETLSESP+VF + NF + Q+A++LI + L +      L RSTTG   S +  S RTSENA+D  SP +++LKRR+FDLLG+RPY   WADGLQ+LRYN +KAY SH DYLE    S    DSAR GG+NRFATV++YLTDV  GGETVFP G  L+G   S  EAL + ++  +      ++PGSWQE ++ EC ++LAV+P KA+AVLFY+Q  +G  D  SLHG CPV++GVKWAANLWVWNG  +G                                 DG +   F S+  G +L+WE+T +  + PG+P     T+  H +++
Sbjct:  203 SCRVFLHNGWEVSNCDELVDDDKLWLVPRHREFIWPTFKRGHQVEVRHVASG-NGEPIIVETLSESPKVFRLNNFFTSQEADELIAHTLNLKDPVNGLHRSTTGQGASAQEDSHRTSENAWDLNSPASLRLKRRIFDLLGIRPYKNAWADGLQILRYNLTKAYNSHFDYLEHPKGSR--MDSARPGGSNRFATVVVYLTDVAAGGETVFPAGKALDGTDKSYGEALKEMESQDIDLRAIGIKPGSWQERLVVECRSKLAVRPVKAQAVLFYNQLPEGGQDNASLHGGCPVLEGVKWAANLWVWNGNVHG----------------------DEHTSQVEEEDDGSLTVNFLSTNKGYSLYWEDTFFAALQPGVPK-SMNTFDGHTFHI 564          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: CBN75608.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 312.0 bits (798), Expect = 4.500e-81
Identity = 169/383 (44.13%), Postives = 235/383 (61.36%), Query Frame = 0
Query:  185 KQRQSKQEGQECATTSRLALFLSRNVTVHICRNGQSIPMGTLYLTPSSTRCLDDLRNAVGDLLPACV--------PGACRLFDRYGYEIKALGALQDEQLLFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSNHDFDSAREG-GTNRFATVLLYLTDVEQGGETVFPHGYKLEGETLSKKEALAKAKALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYG 559
            K R  +Q   E A     ++ L++   V +  NG+     +  ++P+    L DL   +G  +  CV        P  C++F+R G  + ++ +++D + L+ V   R+F+WP  ++G KV VP V S + G  + LETLS SPRVF + NF+  ++A+ +IE+ALG+T E + LKRS+TG +G  +S  RTS+NAF T +  A  LKRR+F LLG+  Y ETWADGLQVLRYNES+AY++H DYLE      HDF S  EG GTNRFATV+LY  DV +GGETVF H   ++   +   +   +     L   L    W+E+++ +C   + V PK+ +AVLFY+Q+ DG  D  S HGACPVI G KWAANLWVWNGPRYG
Sbjct:   73 KARVDQQPLPEKAVEVIPSVCLTQPCKVKVFHNGEHEGGKSFTVSPADVEGLQDLGEWLGPKM-ECVSQGMRRDEPKYCKVFNRVGVRVPSMASVEDGETLYVVPQNRNFVWPTVKIGRKVTVPHVKSPL-GAEVVLETLSHSPRVFSLYNFMDMEEADSIIEDALGMTQEAYRLKRSSTGTKGKAISKTRTSDNAFVTHTNTAQALKRRIFQLLGIEEYHETWADGLQVLRYNESQAYVAHFDYLE--SAEGHDFKS--EGLGTNRFATVVLYFNDVREGGETVFTHAPGIDHHLVPDTKVPVREVLENLD--LPRSGWEEKLLLQCRRHMVVAPKRGQAVLFYNQHPDGRKDLSSEHGACPVIDGQKWAANLWVWNGPRYG 447          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: XP_002286451.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96092.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 273.9 bits (699), Expect = 1.400e-69
Identity = 152/370 (41.08%), Postives = 219/370 (59.19%), Query Frame = 0
Query:  277 LFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQ-PITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYL-EVNDRSNHDFDSAREGGTNRFATVLLYLTDVEQ--GGETVFPHGY---KLEGETLSKKEALAKAKALG-LTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEFSSSVGGVALFWEETRWGEMGPGLPAVKAITYQNHKWNVR 639
            L+AV   R F++    VG    +P V   +P   P+ LE +S  PRVF + NF   ++++ +++ A+  T+E   +KRS+TGA G  V+SQRTSEN FDT    A  +K R  ++LG   Y+E++ DGLQVLRYN++ AYI HLD++ + + +  H++DSA   G+NRFAT+LLY++D+ +  GGETVF  G+   + E E +  K+ALA  +  G +T  L+ GSW+E+M+  C +RLAV+P  +RA LFYSQN DG+ D+ SLHG CPVI G KWAANLWVWN PR G                                  G  E   ++      L++++T WGE+G   P +   TY+ H+WNV+
Sbjct:  297 LYAVQAGRVFIFAPKYVGEIFELPHV--EVPNNLPVWLEVISLKPRVFDIFNFFDKEESKAIVDKAIAETSETHRMKRSSTGASGYNVNSQRTSENGFDTHGKEAQAVKHRCMEILGFDEYIESFTDGLQVLRYNKTTAYIPHLDWIDDYHKKEEHNYDSAGI-GSNRFATILLYMSDLGEGDGGETVFVKGWPPGQSEEERVQLKDALASLRESGDVTGLLKEGSWEEKMVANCRSRLAVRPHSSRAALFYSQNPDGSPDEDSLHGGCPVINGEKWAANLWVWNAPRGGFPGAPVNKHVVDKNRAAGKSPDQDLQKKASFTNAGSDEGTRNAK-----LYFQDTFWGELGHNSPQLNVNTYEGHQWNVK 658          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: GAX21285.1 (hypothetical protein FisN_1Lh115 [Fistulifera solaris])

HSP 1 Score: 273.1 bits (697), Expect = 2.300e-69
Identity = 161/377 (42.71%), Postives = 220/377 (58.36%), Query Frame = 0
Query:  277 LFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSN---HDFDSAREGGTNRFATVLLYLTDVEQ--GGETVFPHGYKL---EGETLSKKEALAKAKALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEFSSS------VGGVALFWEE-TRWGEMGPGLPAVKAITYQNHKWNVR 639
            L+AV   R FM+    VG    +  V  SI G+ IT+ETLS  PRVF + NF + ++A+ L+  ALG T+E +   RSTTG  G+ V S+RTSENA+DT    A K+KRR F LLG+  Y E+ +DGLQ+LRYN +KAY SH DYLE  D++N   +D+DS+ +GG NRFAT+LLY +D+ +  GGETVFP  + +     E +   EA+ + +A G    L PGSW+EEM+ +C  RL VKP+K RAVLFYSQ  +GT+D  S HG CPV+KG K+AANLW W+  R                                     +V A F +S           +++E+ T +G +GP  P V   T++ HKWN++
Sbjct:  208 LYAVPAGRMFMFAPSHVGEVFELKHVKDSI-GEVITVETLSLEPRVFDIHNFFTVEEADQLLIKALGETSETYGFHRSTTGTSGASVFSKRTSENAWDTHGVTAQKVKRRCFSLLGIDEYEESMSDGLQILRYNLTKAYTSHYDYLE--DKANKELYDYDSSMKGG-NRFATILLYFSDLPEDGGGETVFPRAWPVGLPVEERVQLPEAIKQLRASGEADLLTPGSWEEEMVAQCRTRLTVKPRKTRAVLFYSQYPNGTLDTFSYHGGCPVLKGTKFAANLWTWSAIR------------PEFPGAPTKREKTPEEIEEEAAATRQVHATFRNSGKDPRFDASTQVYYEDLTFFGNLGPNDPPVGVNTFKTHKWNIK 568          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: GAX12189.1 (hypothetical protein FisN_1Hh115 [Fistulifera solaris])

HSP 1 Score: 271.2 bits (692), Expect = 8.800e-69
Identity = 160/377 (42.44%), Postives = 218/377 (57.82%), Query Frame = 0
Query:  277 LFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSN---HDFDSAREGGTNRFATVLLYLTDVEQ--GGETVFPHGYKL---EGETLSKKEALAKAKALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEFSSS------VGGVALFWEE-TRWGEMGPGLPAVKAITYQNHKWNVR 639
            L+A    R FM+    VG    +  V  SI G+ IT+ETLS  PRVF + NF + ++A+ L+  ALG T+E +   RSTTG  G+ V S+RTSENA+DT    A K+KRR F LLG+  Y E+ +DGLQ+LRYN +KAY SH DYLE  D++N   +D+DS+ +GG NRFAT+LLY +D+ +  GGETVFP  + +     E +   EA+ + +A G    L PGSW+EEM+ +C  RL VKP K RAVLFYSQ  +GT+D  S HG CPV+KG K+AANLW W+  R                                     +V A F +S           +++E+ T +G +GP  P V   T++ HKWN++
Sbjct:  210 LYAAPAGRMFMFAPSYVGEVFELKHVKDSI-GEVITVETLSLEPRVFDIHNFFTVEEADQLLTKALGETSETYGFHRSTTGTSGASVFSKRTSENAWDTHGATAQKVKRRCFSLLGIDEYEESMSDGLQILRYNLTKAYTSHYDYLE--DKANKELYDYDSSMKGG-NRFATILLYFSDLPEDGGGETVFPRAWPVGLPVEERVQLPEAIKQLRASGEADLLTPGSWEEEMVAQCRTRLTVKPSKTRAVLFYSQYPNGTLDTFSYHGGCPVLKGTKFAANLWTWSAIR------------PEFPGAPTKREKTPEEIEEEAAATRQVHATFRNSGKDPRFDASTQVYYEDLTFFGNLGPNDPPVGVNTFKTHKWNIK 570          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: OEU20751.1 (hypothetical protein FRACYDRAFT_181419 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 269.2 bits (687), Expect = 3.300e-68
Identity = 153/375 (40.80%), Postives = 219/375 (58.40%), Query Frame = 0
Query:  277 LFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVND-RSNHDFDSAREGGTNRFATVLLYLTDV--EQGGETVFPHGYK-----LEGETLSKKEALAKAKALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEFSSS-----VGGVALFWEETRWGEMGPGLPAVKAITYQNHKWNVR 639
            L+AV   R FM+    VG    +P V  ++  + I LE LS SPRVF V NF S  ++++++E A    ++   +KRSTTGA    V+S+RTSE+ FDT+   A+K+K+R F+ LG   Y+E+ +DGLQ+LRYN SKAY SHLD++E N  +  HD++S+  GG NR+AT+LLY++D+  + GGETVFP G        E E +S  EA  + +     + L+ GSW+E ++  C  RLA++P  +RAVLFYSQ+ +G VDK SLHGACPV+   K+AANLWVWN PR G                                 + ++ AEF +S          LF+++  WG + PG P +   T++ H WNV+
Sbjct:  228 LYAVPAGRVFMFAPSYVGEIFHLPHVPGAL-DKAIYLEVLSLSPRVFDVFNFFSRDESKEIVEKAQAEKSDSHRIKRSTTGASSHSVNSRRTSESGFDTSGKTAIKIKKRCFEALGYDEYIESHSDGLQILRYNVSKAYNSHLDFIEDNSGQLKHDYESSGTGG-NRYATILLYMSDLGDDDGGETVFPQGMMPKIALEEEEAVSSNEAREQLRVSDRGSVLKSGSWEENLVVLCRTRLAIRPHSSRAVLFYSQHPNGEVDKSSLHGACPVLSNQKYAANLWVWNTPRSG-----------FAGSPIKKKFQNENGGAVTAPTNMKISAEFENSGQDPTFAEAKLFYQDQFWGSLKPGDPVLGVNTFEGHVWNVK 589          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: OQR87192.1 (hypothetical protein ACHHYP_09410 [Achlya hypogyna])

HSP 1 Score: 261.2 bits (666), Expect = 9.100e-66
Identity = 148/392 (37.76%), Postives = 220/392 (56.12%), Query Frame = 0
Query:  254 ACRLFDRYGYEIKALGALQDEQLLFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAE--GSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSNHDFDSAREGGTNRFATVLLYLTDVEQGGETVFPHGYKLEGETLSKKEALAKAKALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEFSSSVG-GVALFWEETRWGEMGPGLPAVKAITYQNHKWNVRREEG 643
            A R+F+  G  I++   +++ + L+ V P  HF+WP  E+GHKV+V   T S   +PI LE+ +ESPRVFL+ +F + ++A+ L++  L I  E   L+RS  G E    + S+ RTS+NAFD+ S IA+ L +R FDLL +  Y +  ADGLQ+LRY + +AYI H DY +VN   + ++ + + GG+NRFATV LYL++V +GG+TVFP     EG   ++   +  A  L +    + GSW+ +M  +C  +LA  P+K  AVLFYSQ  +G +D  S HG CPV+ G KWAANLWVWN  RYG                                   ++   F + +   V LFW  T+  ++ P        +Y NH+W ++ ++G
Sbjct:   76 ADRVFNGRGQLIESYDGIEENERLYLVAPGLHFVWPFVELGHKVSVQS-TQSPTEKPIVLESFNESPRVFLIHDFFTNEEADGLVKRILEIDNEHSKLQRSYVGHENGAKKTSTVRTSDNAFDSESEIAVSLNKRAFDLLSVGEYKDDMADGLQLLRYQQKQAYIPHTDYFDVNTSPDWNW-NPKAGGSNRFATVFLYLSNVTRGGQTVFPLANMPEGVVHAQ---VPDADELSI---FEKGSWEAKMAMQCHTKLASYPRKTHAVLFYSQKGNGELDPMSEHGGCPVLDGTKWAANLWVWNRRRYG-------------------------------LDSEKISVTFYNHLDHPVELFWSSTKMQDI-PAHDQAFFESYHNHEWTIKDDQG 427          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: GAX11047.1 (hypothetical protein FisN_21Lh011 [Fistulifera solaris])

HSP 1 Score: 261.2 bits (666), Expect = 9.100e-66
Identity = 155/410 (37.80%), Postives = 214/410 (52.20%), Query Frame = 0
Query:  277 LFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSNHDFDSAREGGTNRFATVLLYLTDVE--QGGETVFPHGYKL---EGETLSKK-----------------------------------EALAKAK----ALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRVEAEF-----SSSVGGVALFWEETRWGEMGPGLPAVKAITYQNHKWNV 638
            L+AV   RHFM+    +G  + +P VT   P QP+ LE LS SPRVF + N  S Q++EDL++ AL  T E + L+RSTT + G +V+  RTSE AFD     AM +KRR F +LGM  Y+E++ADG+Q+LRY    AY  H+D++E N RS HD+DSA + G+NRFAT LLY++++E  QGGETVF + + L   E E L+ +                                   + L +AK           L PGSW+E++ G C +RLA++P  AR VLFYSQ  DG  DK S HGACPV    K+AAN+WVWN  R G                                    +EA F     +  +    L++++T WG + P    + A T + H+W +
Sbjct:  233 LYAVPAGRHFMFAPKYIGETIPLPHVTGGDPTQPVYLEVLSVSPRVFDLVNLFSKQESEDLVQRALAETRESYRLQRSTTQSNGRQVNRYRTSETAFDAVGETAMNIKRRSFAVLGMSKYIESYADGVQILRYQNGTAYQKHVDWIEPNIRSQHDYDSAGQ-GSNRFATFLLYMSNLEANQGGETVFANAWPLDVAETERLTVEQVSTCIRSAVYCLQLTTNKTTKSLFVWTPFWRTPVDVLTQAKDQLMESDFAHFLTPGSWEEDLAGWCRSRLAIRPASARTVLFYSQLPDGEEDKSSRHGACPVFNTTKFAANVWVWNAARSGHPNSPKNPNYKKPPRATP------------------IEATFINTGANPDMDDAELYYKDTLWGRLRPDGTPITASTLKEHQWTI 623          
BLAST of NO16G00670 vs. NCBI_GenBank
Match: XP_008617394.1 (hypothetical protein SDRG_13089 [Saprolegnia diclina VS20] >EQC29216.1 hypothetical protein SDRG_13089 [Saprolegnia diclina VS20])

HSP 1 Score: 255.8 bits (652), Expect = 3.800e-64
Identity = 160/450 (35.56%), Postives = 238/450 (52.89%), Query Frame = 0
Query:  210 VTVHICRNGQSIPMGTLYLTPSSTRCLDDLRNAVGDLLPACVPG-----------ACRLFDRYGYEIKALGALQDEQLLFAVLPKRHFMWPAFEVGHKVAVPGVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFALKRSTTGAEGSE--VSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETWADGLQVLRYNESKAYISHLDYLEVNDRSNHDFDSAREGGTNRFATVLLYLTDVEQGGETVFPHGYKLEGETLSKKEALAKAKALGLTAALQPGSWQEEMMGECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLWVWNGPRYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDG-RVEAEFSSSVG-GVALFWEETRWGEMGPGLPAVKAITYQNHKWNVRREEGGE 645
            V V + RNG+S+    + +TP+      DL   +   LP  V G           A R+++  G  ++++  +++ + L+ V P   F+WP  E+GH V+V   T S   +PI LE+ +ESPRVFL+ +F +  +A+ L++  L I  E   L+RS  G +      S+ RTSENAFD+ S IA+ L +R FDLLG+  Y +  ADGLQ+LRY + +AYI H DY  V+   + ++ + + GG+NRFATV LYL++V +GG+TVFP     EG       A A+          + GSW+ +M  +C  +LA  P+K  AVLFYSQ  +G +D  S HG CPV+ G KWAANLWVWN  RYG                                 DG +++  F +++   V L+W  TR  E+     A    +Y  H+W ++  +G +
Sbjct:   18 VHVTVYRNGESVDGVAVDVTPAMATSGLDLATHLSTFLP--VDGMLDDASVKTTVADRVYNGRGQLVESIDHIEENERLYLVAPGLLFVWPFVELGHTVSVES-TQSPTQKPIVLESFNESPRVFLIHDFFTNDEADGLVKRILEIDNEHSKLQRSFVGHQSGAKLTSTVRTSENAFDSESEIAVSLNKRAFDLLGIGDYQDDMADGLQLLRYQQKQAYIPHTDYFGVDTSPDWNW-NPKTGGSNRFATVFLYLSNVTRGGQTVFPLTNMPEG------IAHAQVPTDDELGIFEKGSWEAKMAMQCHTKLASYPRKTHAVLFYSQKGNGELDPMSEHGGCPVLDGTKWAANLWVWNRRRYG--------------------------------LDGTKIDVTFHNNLDVPVELYWSTTRMQEIAAHSQAFFK-SYDGHEWTLKDLDGND 424          
The following BLAST results are available for this feature:
BLAST of NO16G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24063.11.500e-18058.80Prolyl 4-hydroxylase, alpha subunit [Nannochlorops... [more]
EWM25834.11.500e-8445.36Prolyl 4-hydroxylase, alpha subunit [Nannochlorops... [more]
CBN75608.14.500e-8144.13conserved unknown protein [Ectocarpus siliculosus][more]
XP_002286451.11.400e-6941.08predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX21285.12.300e-6942.71hypothetical protein FisN_1Lh115 [Fistulifera sola... [more]
GAX12189.18.800e-6942.44hypothetical protein FisN_1Hh115 [Fistulifera sola... [more]
OEU20751.13.300e-6840.80hypothetical protein FRACYDRAFT_181419 [Fragilario... [more]
OQR87192.19.100e-6637.76hypothetical protein ACHHYP_09410 [Achlya hypogyna... [more]
GAX11047.19.100e-6637.80hypothetical protein FisN_21Lh011 [Fistulifera sol... [more]
XP_008617394.13.800e-6435.56hypothetical protein SDRG_13089 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003054NSK003054Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00670.1NO16G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|76920gene_5946Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100063g19gene6410Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00670.1NO16G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00670 ID=NO16G00670|Name=NO16G00670|organism=Nannochloropsis oceanica|type=gene|length=2669bp
AAGCAAGCATGTACGGTCCATTTCTGCGGCATTGTGTAAACACCATCGCA
GCAGGTCCCCATAGTCCTGTTGTGCAGCATGGTGGCCTCGTGCGGGACGT
TGAGTCATCATCAAATTACGCGCTTGACCGGTCCGGCTGGCGCTCTGCCT
TTCTTCCATGCCCCATCCCCAACAAACGGAACGCCCTACATCCCTCACAC
TCACTCCTTTACTCAAAATTTCCAGTGCTTCTGCAAAGACGACGACGCTA
TGGCCAGTCGACGCACTTCCTCCAGCACACCGGCGCAAAAGCCCATGAAA
GGCAGGATCCCCGAGTCCCACCAGCTCGACGAGGATGACAATGGCTCTCT
GCTTTCCTCCTTGGCCGCCACCTCGTCTTCTTCCCCCCTCCTGGCATTCT
TGAAATCCAACCCCTTGATCATCGTGATAGCTGCATTAGCCGCCGGGGTA
TATTTTGGCATGAAGCACCAGTCTCAAGGCGTGGACCTGGCCGACAGCGT
CTCCTCTTTTCTCCACGAAGGACGCAGCGACAGCATCACCGCGCGTGCCC
CCACCCTCGCGACTCCCTCTCTTGCTTCCTCCTCCCAGCAAGAGCAGCAC
ATGGCAGGTACCCCTATGAAAGCCCGAAAGAAGCAGCGACAATCCAAGCA
GGAGGGACAAGAATGTGCTACCACTTCCCGTCTCGCCCTTTTTCTCTCGC
GAAACGTCACCGTCCACATCTGCCGCAACGGCCAAAGCATCCCCATGGGA
ACCCTGTACCTTACTCCCAGCAGCACCCGTTGCCTCGACGACCTCCGAAA
CGCGGTGGGTGATTTATTGCCTGCATGTGTTCCTGGGGCCTGCCGACTCT
TTGATCGCTATGGGTATGAAATCAAGGCTCTAGGCGCCCTGCAAGATGAG
CAGCTTCTCTTCGCCGTCCTCCCCAAGCGACACTTCATGTGGCCGGCCTT
CGAGGTCGGGCACAAAGTTGCTGTGCCTGGAGTGACTTCCTCAATCCCGG
GGCAGCCTATCACGCTGGAGACGCTATCGGAGTCTCCGCGTGTGTTCTTG
GTCGAAAATTTCCTCTCTCCCCAAGACGCGGAGGACTTGATTGAGAATGC
CCTAGgtattttaggtggcagtttggcatacatttgctgataattaaggg
aaagagtgtgagataaaagagtctttggctttcttttccctctcctttgg
cctgcattagatgcttaccaactcagtcccctccttcccttccttccctt
cttcccttattttttccagGCATTACTGCCGAAGGCTTTGCTCTTAAGCG
ATCCACCACAGGCGCAGAGGGGTCTGAGGTATCTTCGCAACGAACGAGCG
AGAATGCATTTGATACTACCTCGCCCATTGCGATGAAGCTAAAGAGAAGG
GTGTTTGACCTTCTGGGGATGAGgtacgtatgtaagcagggcgggaggga
gggaggtggggacgaaaggacagaaaagtagaagtaagccatcaactcac
gaatatcctgtcccctccctccctccctccctcccttagGCCCTACGTCG
AGACCTGGGCGGATGGTCTTCAAGTGCTCCGCTACAATGAAAGCAAGGCT
TACATCTCCCATTTAGACTATCTGGAGGTCAATGACCGGTCCAACCACGA
TTTTGACTCAGCAAGGGAGGGAGGGACCAACCGCTTTGCAACCGTGCTGC
TGTACCTCACGGATGTGGAACAGGGGGGCGAGACGGTGTTTCCCCACGGA
TACAAATTGGAGGGGGAAACCTTGTCAAAAAAGGAGGCATTGGCCAAGGC
AAAAGCCCTCGGGTTGACCGCGGCCCTCCAACCGGGTTCGTGGCAAGAGG
AGATGATGGGCGAATGTATCAACAGGCTAGCGGTCAAACCCAAAAAGGCA
CGAGCTGTCTTGTTCTACTCTCAGAATGAGGACGGGACGGTGGACAAGAG
AAGCCTGCATGGTGCGTGCCCGGTCATCAAGGGAGTGAAGTGGGCAGCAA
ACCTCTGGGTCTGGAACGGTCCGAGGTACGGATACAGTGCCAGGCAGAGA
GAGAAGGCAGTGGCAGCGGCGGAAGGGGAGGACTGGAAGGGGAATGGGGA
AGGGAAAGGGAAGGGGAAGTATAAGGGACGGGACGGGAGGGTGGAGGCAG
AGTTTTCAAGTAGCGTTGGCGGAGTGGCTTTGTTCTGGGAGGAGACAAGG
TGGGGAGAGATGGGACCAGGGCTACCGGCGGTAAAGGCCATAACGTATCA
GAACCATAAGTGGAATGTGAGGAGGGAGGAAGGAGGGGAGGGAGGGGAGG
TGTTGGTGGCTTGGGAGATTAAGACCGCGGAGGCGGTGGAGGGGGTGGTG
AAATTTAATTATGCAGGGTGAAGGAGGGAAGGAGGGCTGGTAAGATGGAA
AGTATATGTGTGTAACGATAAAGGGAAATAGGAATGCGACTCAATCACAA
ACCCAGAAGCATGACCGAGAGGACCGACGAAAAGAAGACGATGAGAGCAA
GCAACAACAGTTAAACAAGCACTTTATTCATTGAAGCGTATTACATGTAT
ACAAGTATGCATGAAATAAATGTATGCATGTAATACATGAATGCATGAAG
GTACCACCAACGTTGTCGTTTGGAATGCCATCGAGCGCCTGTCTCGACAC
ATCGAAATATGGAATTCCC
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protein sequence of NO16G00670.1

>NO16G00670.1-protein ID=NO16G00670.1-protein|Name=NO16G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=671bp
MVASCGTLSHHQITRLTGPAGALPFFHAPSPTNGTPYIPHTHSFTQNFQC
FCKDDDAMASRRTSSSTPAQKPMKGRIPESHQLDEDDNGSLLSSLAATSS
SSPLLAFLKSNPLIIVIAALAAGVYFGMKHQSQGVDLADSVSSFLHEGRS
DSITARAPTLATPSLASSSQQEQHMAGTPMKARKKQRQSKQEGQECATTS
RLALFLSRNVTVHICRNGQSIPMGTLYLTPSSTRCLDDLRNAVGDLLPAC
VPGACRLFDRYGYEIKALGALQDEQLLFAVLPKRHFMWPAFEVGHKVAVP
GVTSSIPGQPITLETLSESPRVFLVENFLSPQDAEDLIENALGITAEGFA
LKRSTTGAEGSEVSSQRTSENAFDTTSPIAMKLKRRVFDLLGMRPYVETW
ADGLQVLRYNESKAYISHLDYLEVNDRSNHDFDSAREGGTNRFATVLLYL
TDVEQGGETVFPHGYKLEGETLSKKEALAKAKALGLTAALQPGSWQEEMM
GECINRLAVKPKKARAVLFYSQNEDGTVDKRSLHGACPVIKGVKWAANLW
VWNGPRYGYSARQREKAVAAAEGEDWKGNGEGKGKGKYKGRDGRVEAEFS
SSVGGVALFWEETRWGEMGPGLPAVKAITYQNHKWNVRREEGGEGGEVLV
AWEIKTAEAVEGVVKFNYAG*
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Synonyms
Publications