NO16G00580, NO16G00580 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00580 vs. NCBI_GenBank
Match: EWM24073.1 (Kua-ubiquitin conjugating enzyme hybrid, localization [Nannochloropsis gaditana] >EWM24074.1 Kua-ubiquitin conjugating enzyme hybrid, localization [Nannochloropsis gaditana]) HSP 1 Score: 484.2 bits (1245), Expect = 3.200e-133 Identity = 235/330 (71.21%), Postives = 271/330 (82.12%), Query Frame = 0
Query: 1 MCVG------PTLTQSNTPAIPLEPSTLPPLVATSGLDAQDGGPEIDIVDRLNAQTKRLAAKSKSEPGDEDYACLQLVKGGATVFKHRFWPLLYLYWAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLFKGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAFLLLTFGGIAGVARLYLPVFAWAMEGKGWEGAWEGAAESWSRSSML 325
MC+G P +T ++ A+ + S++P DAQDG +DIVDRLN Q K LAAK+ PGDE YACLQ+VK GATVFKHR WPL+Y+YWAYT YGI+T PSLAFA+GAF+LTY+YIDLYGAVLHIVLDNPNFLKLPL+GEACLEFQFHHIIPHEITVR + HIAADLNGIIGL+YG +L LF GL DPA+RC+ACCAVLNAYLGQLAHRQAHM PEKRDPVV VLQ LGLMV PDTHRRHHKTYDQGFPILSGW DAP+TFL++++V SQW+WL+ F+LLTFGGIAG+ RLYLP+ AWA+E EG EGA W++SSML
Sbjct: 1 MCIGSVSAAIPPVTAASAEAV-AQHSSMP----VPESDAQDGDASMDIVDRLNVQAKHLAAKTIGVPGDEHYACLQMVKEGATVFKHRIWPLMYIYWAYTVYGILTGPSLAFALGAFVLTYLYIDLYGAVLHIVLDNPNFLKLPLIGEACLEFQFHHIIPHEITVRDFRHIAADLNGIIGLEYGVNLILFNGLTDPAYRCVACCAVLNAYLGQLAHRQAHMRPEKRDPVVAVLQGLGLMVTPDTHRRHHKTYDQGFPILSGWSDAPVTFLYRYVVPSQWVWLAMFVLLTFGGIAGLIRLYLPLAAWALE----EGGCEGAIRGWAKSSML 321
BLAST of NO16G00580 vs. NCBI_GenBank
Match: EWM29670.1 (Kua-ubiquitin conjugating enzyme hybrid, localization [Nannochloropsis gaditana]) HSP 1 Score: 253.4 bits (646), Expect = 9.200e-64 Identity = 136/301 (45.18%), Postives = 178/301 (59.14%), Query Frame = 0
Query: 1 MCVGPTLTQSNTPAIPLEPS---TLPPLVATSGLDAQDGGPEIDIVDRLNAQTKRLAAKSKSEPGDEDYACLQLVKGGATVFKHRFWPLLYLYWAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLFKGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAFLLLTFGGIAGVARLYLPVF 299
MCV + PA + S ++ +GL QDG D +D+LNA + A K S P +EDY ++V+ G VFK R PLLY YWA G++ APSL F GA TY Y++LY AVLHIVLDNP F+K+P L + EF HHI+P EI R Y I DLN I+GL + +L LF + D C+ AYLGQ AHRQAHM P K P LQ GL+V+P HR HH+TYD+GF IL GW + IT L+ H+V SQ++WL+ F ++T G+AGV ++Y+P +
Sbjct: 1 MCVSARSETATPPAAVSDTSASGSIKRYYDNAGLGRQDG----DAIDQLNAFMTKQAHKVWS-PDNEDYKVYEMVRQGHVVFKRRCMPLLYFYWATILVGLLRAPSLLFLAGALASTYFYMELYSAVLHIVLDNPAFIKVPGLDQPVFEFLAHHILPVEIAQRRYRDICGDLNVIVGLIFAINLLLFDWMKDGRVMCVVAAGGAMAYLGQFAHRQAHMPPSKVSPFARALQDAGLLVSPHLHRAHHRTYDRGFAILGGWSEGLITTLYHHVVPSQYVWLALFAVMTVFGLAGVVKIYIPAY 296
BLAST of NO16G00580 vs. NCBI_GenBank
Match: XP_005854670.1 (kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU21687.1 kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 242.3 bits (617), Expect = 2.100e-60 Identity = 125/280 (44.64%), Postives = 176/280 (62.86%), Query Frame = 0
Query: 43 VDRLNAQTKRLAAKSKS--EPGDEDYACLQLVKGGATVFKHRFWPLLYLYWAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLF---KGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAFLLLTFGGIAGVARLYLPVFAWAMEGKGWEGAWEGAAES 318
+++LN + A + + P D+ +LV+ G VFKHR+ LLY YWA T G++ PSLAF + AFI+TY+YI+LYGA+LH+ LDNP+FL LP+L EACLEFQ+HH+IP EIT+RSY IAADLN I+ LQ+ +F GL +P C ++NAYL + AHRQAH KR LQ G +V+ HRRHH+T+D GFP+LSG + I F+ + ++QW+WL+AF+L+T G+ + + + ++ W G E + G ES
Sbjct: 52 IEKLNGMAMKRAQEMEKVLTPSHPDWPMYELVRRGNPVFKHRWMVLLYAYWALTGAGLLRCPSLAFGMSAFIITYLYIELYGAILHVNLDNPSFLFLPVLWEACLEFQYHHVIPSEITLRSYPQIAADLNLIVALQFIVCTIVFYAHGGLFNPYIHATMACGLVNAYLLEWAHRQAHFPRGKRHAFAQYLQDRGFLVSEALHRRHHQTFDVGFPVLSGLSEPVINFVRAKVCANQWVWLAAFILMTLAGLPCIISVNMRLWEW-----GGEVVYGGGQES 326
BLAST of NO16G00580 vs. NCBI_GenBank
Match: EWM21272.1 (Kua-ubiquitin conjugating enzyme hybrid, localization [Nannochloropsis gaditana]) HSP 1 Score: 241.9 bits (616), Expect = 2.800e-60 Identity = 119/266 (44.74%), Postives = 170/266 (63.91%), Query Frame = 0
Query: 43 VDRLNAQTKRLAAKSKS--EPGDEDYACLQLVKGGATVFKHRFWPLLYLYWAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLF---KGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAFLLLTFGGIAGVARLYLPVFAWAME 304
+++LN + A + + P D+ +LV+ G VFKHR+ LLY YWA T G++ PS AF + AFI+TY+YI+LYGA+LH+ LDNP+FL LP+L EACLEFQ+HH+IP EIT+RSY IAADLN I+ +Q+ +F GL +P C ++NAYL + AHRQAH KR LQ G +V+ HRRHH+T+D GFP+LSG + I F+ + ++QW+WL+AF+ +TF G+ + + + ++ W E
Sbjct: 52 IEKLNGMAMKRAQEMEKVLTPSHPDWPMYELVRRGNPVFKHRWMVLLYAYWALTGTGLLRCPSFAFGMSAFIITYLYIELYGAILHVNLDNPSFLSLPVLWEACLEFQYHHVIPSEITLRSYPQIAADLNLIVAMQFIVCTIVFYAHGGLFNPYIHATMACGLVNAYLLEWAHRQAHFPRGKRHAFAQYLQDRGFLVSEALHRRHHQTFDVGFPVLSGLSEPVINFVRAKVCANQWVWLAAFISMTFAGLPCIISVNMRLWEWGGE 317
BLAST of NO16G00580 vs. NCBI_GenBank
Match: XP_009041532.1 (hypothetical protein AURANDRAFT_67743 [Aureococcus anophagefferens] >EGB03747.1 hypothetical protein AURANDRAFT_67743 [Aureococcus anophagefferens]) HSP 1 Score: 114.4 bits (285), Expect = 6.700e-22 Identity = 71/216 (32.87%), Postives = 104/216 (48.15%), Query Frame = 0
Query: 75 GATVFKHRFWPLLYLYWAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLD---NPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLFKGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAFLLLTFGGI 288
GA V+ +R+ ++++Y A Y I APS A + Y+ D+Y V H+ LD N LK +L + CLEFQ+HH IP +IT +S++ ADLN I+ + + + A L + AY GQ HR AH KR V L G M + H HHK L G+CD I + +H ++ W+W +L +FG +
Sbjct: 96 GALVYPNRYLWMVWVYSAVAIYLICQAPSPAVVLLGVPAMYLCYDVYSGVTHVNLDDQRNLAGLKSYILFQGCLEFQWHHAIPVDITKKSFVACCADLNIIVAVSVVINCVALRYTTGTA-AALTGLKLFGAYFGQYCHRSAHTPKSKRPRVAQYLMDKGFMCPQNKHLGHHKPPHDANFCLVGYCDGIINGMLKHCGTNDWVWFGFWLAFSFGDV 310
BLAST of NO16G00580 vs. NCBI_GenBank
Match: XP_009041782.1 (hypothetical protein AURANDRAFT_67953 [Aureococcus anophagefferens] >EGB03515.1 hypothetical protein AURANDRAFT_67953 [Aureococcus anophagefferens]) HSP 1 Score: 114.0 bits (284), Expect = 8.700e-22 Identity = 71/216 (32.87%), Postives = 104/216 (48.15%), Query Frame = 0
Query: 75 GATVFKHRFWPLLYLYWAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLD---NPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLFKGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAFLLLTFGGI 288
GA V+ +R+ ++++Y A Y I APS A + Y+ D+Y V H+ LD N LK +L + CLEFQ+HH IP +IT +S++ ADLN I+ + + + A L + AY GQ HR AH KR V L G M + H HHK L G+CD I + +H ++ W+W +L +FG +
Sbjct: 96 GALVYPNRYLWMVWVYSAVAIYLICQAPSPAVVLLGVPAMYLCYDVYSGVTHVNLDDQRNLAGLKSYILFQGCLEFQWHHAIPVDITKKSFVACCADLNIIVAVSVVINCVALRYTTGTA-ATLTGLKLFGAYFGQYCHRSAHTPKSKRPRVAQYLMDKGFMCPQNKHLGHHKPPHDANFCLVGYCDGIINGMLKHCGTNDWVWFGFWLAFSFGDV 310
BLAST of NO16G00580 vs. NCBI_GenBank
Match: CBJ29579.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.4 bits (272), Expect = 2.100e-20 Identity = 81/238 (34.03%), Postives = 114/238 (47.90%), Query Frame = 0
Query: 69 LQLVKGGATVFKHRFWPLLYLY-----WAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLFKGLGDPAFRCLAC--CAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAFLLLTFGGIAGVARLYLPVFA 300
+Q V GG F R L+ Y + YGI+ +A +GAF + Y +D Y VLH+VLD+ + +PLL + +EFQ+HH IP + R ++ DLN I+GL LF G F L ++ AY G HRQAH L KR LQ G+M++P H+ HH L G P+T+L + + S + W++ FL LT +RL VFA
Sbjct: 37 IQFVLGGRLPFVKRIETLVRGYVCVSMFFLIRYGILEC-GVAPTVGAFAVMYFVLDFYSGVLHVVLDDDWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFVRGGSQDFMLLTAGGWKMVLAYWGIWNHRQAHQLKSKRPRWCTYLQNNGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTWLGRRNLGSIF-WIALFLGLTALDTICASRLLSMVFA 272
BLAST of NO16G00580 vs. NCBI_GenBank
Match: KRX05823.1 (hypothetical protein PPERSA_02355 [Pseudocohnilembus persalinus]) HSP 1 Score: 102.4 bits (254), Expect = 2.600e-18 Identity = 61/207 (29.47%), Postives = 105/207 (50.72%), Query Frame = 0
Query: 76 ATVFKHRFWPLLYLYWAYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFL---KLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLFKGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKTYDQGFPILSGWCDAPITFLFQHIVSSQWIWLSAF 280
A V++ R L+ Y Y + +PS + +F L + + DL+ +LH+ LD+P L + +L + CLEFQ+HH+IP +I + Y DLN ++GL + + + L +P L+ AY GQ +H+ +H R V++LQ+ ++++ H+ HH +D F I SG + I L + I ++ +W F
Sbjct: 99 AEVYEDRSKYLIAAYICLGIYLVSQSPSWQITVFSFFLNFFWYDLFSGILHVCLDDPRNLIGWRSAILYKPCLEFQWHHVIPADIASKPYYQSIGDLNFVVGLIFAFQCCM-GILSNPTAMVLSGFKFFFAYYGQFSHKMSHTFEGDRSIFVNLLQKSHILLSEKDHKVHHTNHDDNFCIGSGTFNGVIRSLLK-ITTNPNVWFCIF 303
BLAST of NO16G00580 vs. NCBI_GenBank
Match: XP_009034403.1 (hypothetical protein AURANDRAFT_62325 [Aureococcus anophagefferens] >EGB10817.1 hypothetical protein AURANDRAFT_62325 [Aureococcus anophagefferens]) HSP 1 Score: 84.3 bits (207), Expect = 7.400e-13 Identity = 67/222 (30.18%), Postives = 91/222 (40.99%), Query Frame = 0
Query: 92 AYTAYGIVTAPSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIA------------ADLNGIIGLQYGWHLFLFKGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHH-KTYDQGFPILSGWCDAPITFLFQHIVSSQW--IWLSAFLLLTFGGIAGVARLYLPVF 299
A+ A+G V A + F+ + +YID+ G +LH+VLDN N + LL F HH P +I +H A A L I F + A C A LN+ + Q AHR +H V VL+R GL++AP H RHH + F I+ GW D + + W +WL F VA L PVF
Sbjct: 207 AFDAFGFVRRVGFAGTVQLFLASALYIDVTGLLLHLVLDNSNNERFSLLAGGVRSFVNHHADPQKIAATPGLHYAFTHLPVAAAIVWATLIAIYAAASRAKTFDSERYAPTA--VFVCFASLNSVVMQFAHRWSHTPAFAVPTVARVLERAGLLIAPAKHARHHVPPHASNFSIMMGWADKLVNPFLRLAPGGPWSPVWLYVF----------VAWLVSPVF 416
BLAST of NO16G00580 vs. NCBI_GenBank
Match: XP_020873615.1 (fatty acid desaturase 4, chloroplastic [Arabidopsis lyrata subsp. lyrata] >EFH45841.1 hypothetical protein ARALYDRAFT_492093 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 65.5 bits (158), Expect = 3.600e-7 Identity = 49/155 (31.61%), Postives = 66/155 (42.58%), Query Frame = 0
Query: 102 PSLAFAIGAFILTYIYIDLYGAVLHIVLDNPNFLKLPLLGEACLEFQFHHIIPHEITVRSYIHIAADLNGIIGLQYGWHLFLFKGLGDPAFRCLACCAVLNAYLGQLAHRQAHMLPEKRDPVVDVLQRLGLMVAPDTHRRHHKT-YDQGFPILSG 256
P+LA G YI DL V H +DN P++G FQ HH P IT R + A +L+ + + L L DP F C Q H AH K P+V LQ +GL+V+ H HH+ Y+ + I+SG
Sbjct: 129 PALAGCAG-----YILADLGSGVYHWAIDNYGDESTPVVGSQIEAFQGHHKWPWTITRRQF---ANNLHALAQVITFTVLPLDLAFNDPVFHGFVCTFAFCIMFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNNNYCIVSG 275 The following BLAST results are available for this feature:
BLAST of NO16G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00580 ID=NO16G00580|Name=NO16G00580|organism=Nannochloropsis oceanica|type=gene|length=2327bpback to top protein sequence of NO16G00580.1 >NO16G00580.1-protein ID=NO16G00580.1-protein|Name=NO16G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top protein sequence of NO16G00580.2 >NO16G00580.2-protein ID=NO16G00580.2-protein|Name=NO16G00580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=293bpback to top Synonyms
Publications
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