NO16G00500, NO16G00500 (gene) Nannochloropsis oceanica

Overview
NameNO16G00500
Unique NameNO16G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2550
Alignment locationchr16:174996..177545 +

Link to JBrowse

Properties
Property NameValue
DescriptionBeta-glucan synthesis-associated
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:174996..177545 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom
IPR000742EG-like_dom
IPR000757Glyco_hydro_16
IPR005629SKN1
Homology
BLAST of NO16G00500 vs. NCBI_GenBank
Match: XP_005856060.1 (beta-glucan synthesis-associated [Nannochloropsis gaditana CCMP526] >EKU20307.1 beta-glucan synthesis-associated [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 621.7 bits (1602), Expect = 2.400e-174
Identity = 291/418 (69.62%), Postives = 318/418 (76.08%), Query Frame = 0
Query:   99 GYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPGKNFTE--------------------------------LGA------------DWSWYDGLTFGETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMPGTEGYLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFLGCDNPRYPTRKFIQAHRWRYQR 473
            G+LKITTT E T+WKGFNPFT+KYE+FEKEFRG MVN+WNKFCFSGGVVE  L+LPG SD GGLWPAFWLMGNLGRATYEHSTN+MWPW               S CDRTTHWDL QNQGRGATEID+MEAM GK       GDLGVG+PYMSSTLQ+SPGV KNRP  GKNFTE                                 G             +W+WYDGL FGE SKMNMYFYGT+LDKTQKDEPAGRSI QVYQADAVSALT LS+ HWE FHTYRLEWMPG EGYLAW+LDG+ LYD+PA ++   TGAQIP EPSY+ILNTAVSTTWGFP+ CP GCAC CFDCAKPEC+C LP GLCE LPASMLVDYVR+YQLEDDERHFLGC++P++PTRKFIQAHRWRYQR
Sbjct:    4 GHLKITTTSELTQWKGFNPFTQKYEIFEKEFRGAMVNTWNKFCFSGGVVEASLKLPGPSDVGGLWPAFWLMGNLGRATYEHSTNLMWPW---------------SACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQVSLESPRGVRRPRAPSRTCLPPSPLRTVLPFGVSQDLSNLSTGQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQR 406          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: CBN78134.1 (Beta-1,6-glucan active enzyme, family GH16 [Ectocarpus siliculosus])

HSP 1 Score: 543.5 bits (1399), Expect = 8.100e-151
Identity = 262/553 (47.38%), Postives = 361/553 (65.28%), Query Frame = 0
Query:   19 AGWVDPDSPLSARKTHSYRDPRLPPLKLVMSDEFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLG-VGLPYMSSTLQISPGVPKNRPVPGKNFTELGADWSWYDGLTFGETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMP--------GTEGYLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFLGCDNPRYPTRKFIQAHRWRYQRDDEDVPLLPILKGTGACTGEDDCGPGGACHARKKTCVCREGWTGPHCKQKAYHDDDARGKVYLTIRAPSMPPVTLAGSLVALGVVLVFAV 563
            AGW+DPD+P +A+   S  D      +L+MSDEF V  R+F DG DP WT+  HSDDA+TS G G+  FYN SY  TT +G + ITTT E+T W+G+NP+ +KYE   K +R  MVN+WNKFCF+GG++E+  +LPG+ + GGLWPAFWL+GNLGRATYE STN++WPWSY++CD   Q AQEIS C++  H+ +   QGRG+TEID++EA PG   S   + +LG V  PY+S+TLQ++PG+P +RP  G+    L  + +WY+G+ F + S +N +FYG  +DKT   EP  R   Q Y ADA+S LT L+  H+  +H Y+LEW+P        G  G+L W++D + +  I A +V+   G QIP EPSY+ILNTAVS++WGFP  CP GC C C+DC  P C C++P G C+MLP+  ++D+VRVYQ ++D    +GCD P +P++ FI+AHR+RY R  +  PL  ++ G G C  E  C   G CH  K  C C EGW GP C Q  +  DD   + ++ +   S  P+ +   L A+G V+V  V
Sbjct:  107 AGWIDPDTPEAAKTIRSLHDG--AEYELIMSDEFEVNGRSFDDGHDPMWTSTTHSDDAQTSNGLGSQQFYNASY-GTTTKGSMNITTTDESTTWRGYNPYKRKYETLSKSYRSSMVNTWNKFCFTGGIIEIDAKLPGEHNIGGLWPAFWLLGNLGRATYEASTNLVWPWSYDKCDPKLQRAQEISACNKINHFGMHGYQGRGSTEIDILEAQPG--TSDDPLLNLGKVNSPYLSTTLQLAPGIPVHRPTNGE---LLSPENTWYEGMQFAQNSSLNYHFYGMHVDKTTPQEPVYRGADQAYIADAISGLTSLTHTHFHEYHNYKLEWVPPPPTRGDAGPRGHLKWYIDDEMVLGIDAETVE-KHGTQIPNEPSYVILNTAVSSSWGFPDPCPSGCDCACYDCKDPACHCAIPNGFCDMLPSYFMIDHVRVYQNKNDSSMSIGCDIPSHPSKLFIEAHRYRYMRTGDKKPLKDLMVGGGKCNDETGC-HRGRCHWGK--CKCEEGWVGPLC-QSTHKFDDISYEEHVDL---SPRPIAVPVVLQAIGGVIVLLV 643          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: EWM24072.1 (Beta-glucan synthesis-associated, SKN1 [Nannochloropsis gaditana])

HSP 1 Score: 537.0 bits (1382), Expect = 7.600e-149
Identity = 240/316 (75.95%), Postives = 267/316 (84.49%), Query Frame = 0
Query:  202 ISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPGKNFTELGADWSWYDGLTFGETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMPGTEGYLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFLGCDNPRYPTRKFIQAHRWRYQRDDEDVPLLPILKGTGACTGEDDCGPGGACHARKKTCVCREGWTGP 518
            +S CDRTTHWDL QNQGRGATEID+MEAM GK       GDLGVG+PYMSSTLQ+SPGV KNRP  GKNFTE   +W+WYDGL FGE SKMNMYFYGT+LDKTQKDEPAGRSI QVYQADAVSALT LS+ HWE FHTYRLEWMPG EGYLAW+LDG+ LYD+PA ++   TGAQIP EPSY+ILNTAVSTTWGFP+ CP GCAC CFDCAKPEC+C LP GLCE LPASMLVDYVR+YQLEDDERHFLGC++P++PTRKFIQAHRWRYQRD E VPL P+ +G G C    DC PGG+C+ R+K CVC +GWTGP
Sbjct:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADCNPGGSCNRRRK-CVCHDGWTGP 315          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: XP_009034007.1 (hypothetical protein AURANDRAFT_70840 [Aureococcus anophagefferens] >EGB11663.1 hypothetical protein AURANDRAFT_70840 [Aureococcus anophagefferens])

HSP 1 Score: 439.9 bits (1130), Expect = 1.300e-119
Identity = 241/519 (46.44%), Postives = 304/519 (58.57%), Query Frame = 0
Query:   52 FNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKY--EVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGL--PYMSSTLQISPGVPKNRPVPGKNFTELGADWSWYDGLTFGETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMPGTEGYLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFLGCDNPRYPTRKFIQAHRWRYQRDDED--VPLLPILKGTGACTGEDDCG--PGGACHARKKTCVCREGWTGPHCKQKAYHDDDARGK-VYLTIRAPSMPPVTLAGSLVALGVVLVFA 562
            F    RTF DG+DP WTA  H +D        AL FY+  YV TT  G L ITTT E TK++      KK+     +K +R GMV  WNKFCF+GG++E+R +LPG+ D GGLWP  W+MGNL RATY  S+N MWP+SY  C R  Q  QEI+GC    H+ L  +QGRGA EID++E MPG+       G L  GL  PY S++LQ++P  P  RP  G       A  +WY+ L +G  +  N++FYG  LD    +E         Y ADAVS  TP+ +  +E FHTYRLEW P  +G + W+ DGK LY I   S+   TG Q+P+EP YL+LNTA+S+TWGFP  CP GCACDC DCA+ +C C +  G C  LPAS LVDYVRVYQ   D    LGCD   +P++ FI+AH  RY   D     PL  +  G G C  +DDCG  P GAC  R++ C C  G  GP C   A  DD  RG+  +  + AP++PP      L A G+ LV A
Sbjct:  319 FEAEGRTFRDGEDPRWTA-IHKNDYTNK----ALQFYHEDYV-TTSGGSLNITTTPEHTKFESHQIKDKKHVRVTVKKTYRSGMVQGWNKFCFTGGILEIRAKLPGRYDVGGLWPGMWMMGNLARATYVASSNHMWPFSYEACARKDQRRQEINGCMPRPHFGLNPDQGRGAPEIDLLEVMPGE-------GWLPWGLKKPYYSTSLQLAPAAP-IRPFNGAK----PAPGTWYEHLRYGPNTSQNVFFYGMRLDHGSDEES--------YWADAVSGNTPIGASEFEDFHTYRLEWKP--KGSIDWYKDGKFLYGIDDASISSLTGGQVPDEPMYLLLNTAMSSTWGFPAPCPPGCACDCQDCAEEKCACGIAPGFCASLPASFLVDYVRVYQDRGDRAASLGCDTASHPSKAFIEAHEHRYVDPDRPGRAPLERVATGGGRCATDDDCGGRPAGAC--RRRRCACGAGRAGPRCLAPAGADDARRGRGRFWRLPAPAVPP-----QLAATGLALVAA 802          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: XP_002182889.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45625.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 436.8 bits (1122), Expect = 1.100e-118
Identity = 230/519 (44.32%), Postives = 300/519 (57.80%), Query Frame = 0
Query:   21 WVDPDSPLSARKTHSYRDPRLPPLKLVMSDEFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPG-----------KNFTELGADWSWYDGLTFGETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMPGTEGYLAWFLDGKKL------------------YDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPA---SMLVDYVRVYQLEDDE-----RHFLGCDNPRYPTRKFIQAHRWRYQRD------DEDVPLLPILKGTGACTGEDDCG 497
            W+D ++PL  R T S  D       LVMSDEFNV NRTF DG DP WTA D SDD  +S G G+L FYN S VS T+ G+LKI T  E T W  ++   K ++     F  GMV SWNKFCF+GG+VEV +  PG+   GGLWPA W++GNLGRATYE STN +WPWS++ CDR+ Q+AQ IS C+R  H+ +   QGRGATEID++E M G         +  + LPY   TLQ++PGVPKNRP  G              TE  A+  WY  L     + +N +FYGT L +T+  EP  R   + +QADAV A   L+  H++  HT+R+EW PG  G L W+  G ++                  + +   S+    G+QIP EP+YLI NTA+S+TWGFP   P+ C   CFDC  P C C+   G C+ML +   +ML+D VRVYQ  +       +H LGCD P YPTR++I  H +RY R+      D+   L P+ +G G C  + DCG
Sbjct:   72 WIDIETPLKKRTTKSLVDG--STYHLVMSDEFNVENRTFKDGHDPMWTALDRSDDDASSAGGGSLQFYNSSAVS-TENGFLKIATYLETTSWTRYDHVNKHWKTERTNFTSGMVQSWNKFCFTGGIVEVDVVFPGEPFIGGLWPAVWMLGNLGRATYEASTNNIWPWSFDTCDREMQDAQAISACNRENHYGMHPFQGRGATEIDIIEVMTGDSNGPLPSTEPPITLPYGDMTLQVAPGVPKNRPQSGSLPLRKNTFSDNGHTEFLAN-VWYKDLEMHGNTSINPFFYGTYLGETKPGEPVTRGKHEAFQADAVGAAHQLTPAHFKRPHTFRIEWQPGKGGRLDWYTKGYRMNETTYMEGDGEGQEWTHVFSLKDKSLSDLMGSQIPNEPTYLIFNTAISSTWGFPYDPPDWCP-KCFDCNDPTCSCNFYPGFCQMLDSRTVAMLIDSVRVYQSFNTSAHVGGKHTLGCDPPDYPTREWITGHEYRYMRNEPFSYKDKAHSLQPLQRGGGVCRDDSDCG 585          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: GAX27330.1 (hypothetical protein FisN_23Lh095 [Fistulifera solaris])

HSP 1 Score: 436.4 bits (1121), Expect = 1.400e-118
Identity = 247/635 (38.90%), Postives = 332/635 (52.28%), Query Frame = 0
Query:   21 WVDPDSPLSARKTHSYRDPRLPPLKLVMSDEFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPG-----------KNFTELGADWSWYDGLTFGETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMPGTEGYLAWFL----------------DGKKLYDIPAF-----SVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPA---SMLVDYVRVYQLEDD-----ERHFLGCDNPRYPTRKFIQAHRWRYQRD-----DEDVPLLPILKGTGACTGEDDCG-----------------------------------PGGACHAR-------------KKTCVCREGWTGPHCKQKAYHDDDARGKVYLTIRAP--SMPPVTLAGSLVALGVVLVF 561
            ++D ++PL  R T S  D       LVMSDEFNV NRTF DG DP WTA D S                       + G+L+I T  E T+W  ++   K+++   K F  GMV SW KFCF+GG+VEV +  PG++  GGLWPA W++GNLGRATYE STN +WPWSYN+CDR+ Q+AQ IS C+   H+ +   QGRGATEID++E M G           GV  PY   TLQ++PGV KNRP  G              TE  AD +WYDGL +   + +N +FYGT + +T+ +EP  R+ +Q +QADAV  +  L+  H+E  HT+RLEW PG  G L WF+                DGK    + AF     S++  TG+QIP EPSY I+N AVS+TWGFP   PE C  DCFDCA P+C CS   G C+ML +   +M +D++R+YQ  DD     + H LGCD P YPT+++I+ H + Y R+     ++  PL  + +G G CT + DCG                                    GG C +                 CVC EG+TGPHC  +   D            +P  ++P + L G + A+  ++ F
Sbjct:   14 FIDIETPLDKRTTTSLIDG--TTYHLVMSDEFNVENRTFKDGHDPLWTALDKSXXXXXXXXXXXXXXXXXXXXXXKN-GFLRIATYLERTEWNRYDHIKKEWKHEIKNFTSGMVQSWEKFCFTGGIVEVDVIFPGEAYIGGLWPAIWMLGNLGRATYEPSTNNLWPWSYNKCDRELQQAQTISACNAQNHYGMHPKQGRGATEIDIVEVMTGSSDGPIPGTKPGVSYPYCDMTLQVAPGVTKNRPQSGALPKRKNVLSKNGHTEFLAD-TWYDGLMYAGNTSINPFFYGTYMAETKPNEPVSRTKKQAFQADAVGVVHELTPAHFEKPHTFRLEWQPGRGGRLDWFVKSHKIENENGTIYVEGDGKGEEWVHAFGIEDKSLEELTGSQIPIEPSYFIMNVAVSSTWGFPYDRPEWCPKDCFDCANPQCACSFYPGYCQMLESGKTAMYIDHIRLYQSSDDAAHVGQPHTLGCDPPEYPTKEWIEGHYYHYMRNPPFSFEDTRPLRKVPRGGGTCTSDADCGGNVVRKNFTAAFEKSLSSDLSTKAGRRLESVMEVHGGGKCSSEVAHGGLFGLESFMGSVCVCEEGFTGPHCMSQDMKDTFPSAYELNAPLSPFRAIPNIALPGFMFAILSIMSF 644          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: GAX27441.1 (hypothetical protein FisN_23Hh095 [Fistulifera solaris])

HSP 1 Score: 435.3 bits (1118), Expect = 3.100e-118
Identity = 249/649 (38.37%), Postives = 339/649 (52.23%), Query Frame = 0
Query:    7 LLPLLLSLPSALAGWVDPDSPLSARKTHSYRDPRLPPLKLVMSDEFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPG-----------KNFTELGADWSWYDGLTFGETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMPGTEGYLAWFL----------------DGKKLYDIPAF-----SVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPA---SMLVDYVRVYQLEDD-----ERHFLGCDNPRYPTRKFIQAHRWRYQRD-----DEDVPLLPILKGTGACTGEDDCG-----------------------------------PGGACHAR-------------KKTCVCREGWTGPHCKQKAYHDDDARGKVYLTIRAP--SMPPVTLAGSLVALGVVLVF 561
            L+ +L  +  +   ++D ++PL  R T S  D       LVMSDEFNV NRTF DG DP WTA D S                       + G+L+I T  E T+W  ++   K+++   K F  GMV SW KFCF+GG+VEV +  PG++  GGLWPA W++GNLGRATYE STN +WPWSYN+CDR+ Q+AQ IS C+   H+ +  NQGRGATEID++E M G           GV  PY   TLQ++PGV KNRP  G              TE  AD +WYDGL +   + +N +FYGT + +T+ +EP  R+ +Q +QADAV  +  L+  H+E  HT+RLEW PG  G L WF+                DGK    + AF     S++  TG+QIP EPSY I+N AVS+TWGFP   P+ C  DCFDCA P+C CS   G C+ML +   +M +D++R+YQ  DD     + H LGCD P YPT+++I+ H + Y R+     ++  PL  + +G G CT + DCG                                    GG C +                 CVC EG+TGPHC  +   D            +P  ++P + L G + A+  ++ F
Sbjct:   13 LMLILAIIRISSGSFIDIETPLDKRTTTSLIDG--TTYHLVMSDEFNVENRTFKDGHDPLWTALDKSXXXXXXXXXXXXXXXXXXXXXXKN-GFLRIGTYLERTEWNRYDHIKKEWKHEIKNFTSGMVQSWEKFCFTGGIVEVDVIFPGEAYIGGLWPAIWMLGNLGRATYEPSTNNLWPWSYNKCDRELQQAQTISACNAQNHYGMHPNQGRGATEIDIVEVMTGSSDGPIPGTKPGVSYPYCDMTLQVAPGVTKNRPQSGALPKRKNVLSKNGHTEFLAD-TWYDGLMYAGNTSINPFFYGTYMAETKPNEPVSRTKKQAFQADAVGVVHELTPAHFEKPHTFRLEWQPGRGGRLDWFVKSYKIENENGTMYVEGDGKGEEWVHAFGIEDKSLEELTGSQIPIEPSYFIMNVAVSSTWGFPYDRPDWCPKDCFDCANPQCACSFYPGYCQMLESGKTAMYIDHIRLYQSSDDSAHVGQPHTLGCDPPEYPTKEWIEGHYYHYMRNPPFSFEDTRPLRKVPRGGGTCTSDADCGGNVLRKNFTAAFEKSSISDVSTRAGRRLESVKEVRGGGKCSSEVAHGGLFGLESFMGSVCVCEEGFTGPHCMSQDMKDTFPSAYELNAPLSPFRAIPNIALPGFMFAILSIMSF 657          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: EJK73120.1 (hypothetical protein THAOC_05273 [Thalassiosira oceanica])

HSP 1 Score: 427.6 bits (1098), Expect = 6.500e-116
Identity = 216/489 (44.17%), Postives = 287/489 (58.69%), Query Frame = 0
Query:   47 VMSDEFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPGKNFTELGADWSWYDGLTFG-ETSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMP----GTEGYLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFLGCDNPRYPTRKFIQAHRWRYQRDD--EDVPLLPILKGTGACTGEDDCGPGGACHARKKTCVCREGWTGPHCKQKAYHDDD 529
            V SDEF    RTF DG DP WTA D +D         AL FY    V+TT+ G L ITT   A K+K FN  TK+Y    K  + GMV  WNKFC +GG+VE   +LPG    GGLWPA W++GNL RATY  S+N +WP+SY  CD   +++Q+IS C +  H+ +    GRG+ EID++EAM G   S   + +  +  PY SS+LQI+PG+   RPV GK    L     WY+GL +G   +++N +FYG  L+   K           YQ+DA+SA T +  +++ S H YR+EW P     T GYL W+LD K LY I   +++  T  +IP EP YLI+NTAV+++WGFP+ CPEGC C C++C  PEC C LP G C+  PAS  ++YVR YQ +D+ RH LGC     PT +FIQ H   Y   +  + VPLLP+ +G G C  + DCG   +     + C C E +TGP C   A  DD+
Sbjct:   28 VFSDEFEQDGRTFEDGSDPRWTALDKNDYTNE-----ALHFYKPDNVATTN-GVLNITTVLHANKYKAFNEKTKRYYADTKHVQSGMVQGWNKFCMTGGIVEFSAKLPGDPKIGGLWPALWMLGNLARATYVGSSNFVWPYSYGGCDEHNRKSQKISACSKVGHYGMRPGVGRGSPEIDILEAMMG---SPEKLPNTNITRPYFSSSLQIAPGLEGVRPVLGK----LPKKGHWYEGLEYGSNNTQLNPFFYGVTLEHKPK--------AMTYQSDAISANTHVGKEYFTSMHKYRVEWEPPSQDSTGGYLKWYLDDKFLYGISGSNLK-FTNTEIPSEPMYLIMNTAVASSWGFPKPCPEGCDCKCYECGNPECACGLPDGYCKNFPASFEIEYVRAYQAKDESRHLLGCSTENRPTAQFIQGHLKDYSNTEVGQKVPLLPVQRGGGLCGKDSDCGGPHSGQCSDRRCACSEDFTGPRCLSHAGFDDN 494          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: XP_002185118.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43250.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 421.4 bits (1082), Expect = 4.700e-114
Identity = 217/519 (41.81%), Postives = 297/519 (57.23%), Query Frame = 0
Query:   19 AGWVDPDSPLSARKTHSYRDPRLPPLKLVMSDEFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPGKNFTELGADWSWYDGLTFGETSK--MNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMP----GTEGYLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFLGCDNPRYPTRKFIQAHRWRYQRDDEDVPLLPILKGTGACTGEDDCG--PGGACHARKKTCVCREGWTGPHC-KQKAYHDDD 529
            A WVDPD+  +   T    +      +LV SDEF    R FADG DP WTA + +D         AL FY+H    T++ G L ITT  +   +K FN  TK++   +K  + GM+ SWNKFCF GG+VE   +LPG    GGLWPA W++GNL RATY  S++ +WP+SYN+C+   +++QEI+ C    H+ L    GRG+ EID++EAM G+    GD+ +  +  PY S++LQ+SPG+  +RP+ GK   E      WY  L +   +K  +N +FYG  L          +     YQ+DA+SA   L + H+   H YR+EW P    GT GY+ WF DG+ +Y I   S+      +IP EP YL++NTAVS+ WGFPQ CPEGC+C CF+C  PEC C++P G C+  PAS  +DYVRVYQ  ++ +H LGC     PT  FI+ H  RY  + +  PL P++ G G+C+   DCG    G C A    C C E   GP C    A++D D
Sbjct:   27 ASWVDPDTKQAHLTTQPLANEDNRAYELVFSDEFEQAGRKFADGSDPRWTAINKNDYTNE-----ALHFYSHDNAHTSN-GVLNITTVEKENVYKAFNEHTKQFYADKKYVQSGMLQSWNKFCFVGGIVEFSAKLPGDPHKGGLWPALWMLGNLARATYVGSSDYVWPFSYNQCNPKTRQSQEINACSLVNHYGLAPKSGRGSPEIDILEAMQGE---PGDLPNTFIQRPYQSTSLQVSPGIEIDRPILGKRPHE----GHWYPDLEYSSQNKSDLNPFFYGVTL--------VHKPNSYTYQSDALSANLQLKATHYSKQHVYRVEWEPPAEDGTGGYIKWFTDGELIYGIHGKSLD-IMKTEIPSEPMYLLMNTAVSSHWGFPQPCPEGCSCKCFECGNPECACAIPSGYCDNFPASFEIDYVRVYQAINESKHILGCSPEARPTATFIEGHAKRYMTEGQRRPLEPVVTGGGSCSSHKDCGGIERGVCSA-SGLCECSEYSAGPLCLAHAAFYDFD 522          
BLAST of NO16G00500 vs. NCBI_GenBank
Match: OEU14161.1 (beta-glucan synthase-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 417.2 bits (1071), Expect = 8.800e-113
Identity = 210/511 (41.10%), Postives = 289/511 (56.56%), Query Frame = 0
Query:   19 AGWVDPDSPLSARKTHSYRDPRLPPLKLVMSDEFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGYLKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVRLRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQEISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYMSSTLQISPGVPKNRPVPGKNFTELGADWSWYDGLTFGE----TSKMNMYFYGTMLDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMP----GTEGYLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQACPEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFLGCDNPRYPTRKFIQAHRWRYQRDDEDVPLLPILKGTGACTGEDDCG--PGGACHARKKTCVCREGWTGPHC 520
            A WVDPD+P+ +R T S         KLV SDEF    R F DG+DP WTA   +D    +      + Y H   + T+ G L I T  +   ++ FN  TKK+   +K  +  M+ SWNKFCF+GG++E   +LPG    GGLWPA W++GNL RA+Y  S++ MWP+SYN+CD   + +QE+S C +  H+ +    GRGA EIDV+E+M G       +    V  PY S++ Q+SPG+ ++RP  G           WY G+ +       S++N +FYG  L    K           YQADA+SA   L++ H+ + H YR+EW P    GT GY+ WF D   +Y I   ++   TG++IP E  YL++NTAV+ +WGFP  CPEGC C CF+C  P+C C+LP G CE  PA+  +DYVRV+Q   +E+H LGC     PT  FI+ H+ RY    + +P+LP+ KG   C    DCG    G C AR   CVC+E  TGP+C
Sbjct:   34 ASWVDPDTPIKSRITESLLRDDSRQFKLVFSDEFEQDGRNFHDGNDPRWTALHKNDYTNLA------LHYYHRDNAKTENGVLSIKTESKENAYRAFNEKTKKFFNDKKYIQSSMLQSWNKFCFTGGIIEFSAKLPGSPRIGGLWPALWMLGNLARASYVGSSDFMWPYSYNQCDTTNRLSQEVSSCSKVNHYGMQPYHGRGAPEIDVIESMQG---DAEKLPSTTVTRPYQSASFQVSPGIERDRPALGMK----PKQGHWYTGMEYNHENLTKSELNPFFYGVKLVHKLKS--------YTYQADALSANRGLNTSHYTNQHIYRVEWDPPAEDGTGGYIRWFTDDVLMYGITGSNLH-TTGSEIPSEAMYLLMNTAVAASWGFPAPCPEGCKCKCFECGNPDCACALPTGYCENFPATFEIDYVRVFQALGEEKHTLGCSPVNRPTSLFIKGHQKRYMEKGDTMPILPVQKGGATCRENKDCGTIKKGHCSAR-GFCVCKENSTGPNC 521          
The following BLAST results are available for this feature:
BLAST of NO16G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856060.12.400e-17469.62beta-glucan synthesis-associated [Nannochloropsis ... [more]
CBN78134.18.100e-15147.38Beta-1,6-glucan active enzyme, family GH16 [Ectoca... [more]
EWM24072.17.600e-14975.95Beta-glucan synthesis-associated, SKN1 [Nannochlor... [more]
XP_009034007.11.300e-11946.44hypothetical protein AURANDRAFT_70840 [Aureococcus... [more]
XP_002182889.11.100e-11844.32predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX27330.11.400e-11838.90hypothetical protein FisN_23Lh095 [Fistulifera sol... [more]
GAX27441.13.100e-11838.37hypothetical protein FisN_23Hh095 [Fistulifera sol... [more]
EJK73120.16.500e-11644.17hypothetical protein THAOC_05273 [Thalassiosira oc... [more]
XP_002185118.14.700e-11441.81predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU14161.18.800e-11341.10beta-glucan synthase-like protein [Fragilariopsis ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003035NSK003035Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00500.1NO16G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671616gene_5924Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100644g1gene6392Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00500.1NO16G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00500 ID=NO16G00500|Name=NO16G00500|organism=Nannochloropsis oceanica|type=gene|length=2550bp
ATGCCCCTCCTCCCCCTCCTTCTCCCCCTCCTCCTATCCCTCCCCTCCGC
ACTTGCCGGTTGGGTCGACCCCGACAGCCCTCTATCTGCCAGGAAGACTC
ACTCTTATCGAGACCCGCGCCTTCCTCCTCTCAAGCTGGTTATGTCCGAC
GAGTTTAATGTTGTCAATCGTACCTTCGCGGATGGGGATGACCCTACCTG
GACTGCTGGCGACCACAGTGACGATGCCAGGACGAGCGTGGGAAAGGGGG
CTTTGATTTTTTACAATCATTCGTATGTCTCTACGACTGATGAGgtaagt
ctgctggtggcctcggccttccttcttctttccctttcctccgatggttg
acggaaaggcggcgtaattgactctcctccctccctccctccctccctcc
cttgccaatttccacctttgttacacgcacagGGCTACCTGAAAATCACC
ACGACAGGCGAGGCCACCAAGTGGAAGGGCTTCAACCCCTTCACCAAGAA
GTATGAAGTCTTCGAGAAGGAGTTCAGGGGCGGCATGGTCAATTCTTGGA
ACAAGTTCTGTTTCTCCGGAGGGGTCGTTGAGGTGCGGCTGCGCTTGCCG
GGCAAAAGTGATACTGGCGGCCTGTGGCCCGCATTTTGGTTGATGGGGAA
TCTGGGGAGAGCGACGTACGAGCACTCGACGAACATGATGTGGCCGTGGT
CCTACAACCGGTGCGACCGGGACAGGCAGGAAGCGCAGgtgggtcaatgc
ctaacaccgaccaacatacacacgcgcgcgcgcgtatgtatgtatgtgtg
atgcaatctataagtaagtgacactcaactaacatcctacctcccccccc
ctccagGAGATTTCGGGTTGCGATCGCACCACGCACTGGGACCTGCTCCA
AAACCAAGGCCGAGGCGCCACAGAGATCGACGTCATGGAGGCCATGCCCG
GAAAGCAGGTCTCGAAGGGGGACATGGGCGACTTGGGGGTCGGGCTCCCC
TACATGTCTTCCACCCTGCAGATCTCGCCCGGTGTACCGAAGAACCGCCC
CGTCCCTGGGAAGAATTTCACGGAGCTCGGGgtacgtttcgtgtccttgc
ctcccctccctccctcccccccttcatctttttggggccaatgtccaagg
gcgaaagtaaacgaattatttaaaagatagtaaagccgatttcacgtcat
accaactcccccccctcccctcccccccttctcctcctatctctctctca
cgcaccgcgctcacccccacctctccctccacagGCAGACTGGAGCTGGT
ACGACGGCCTAACCTTCGGAGAGACCTCCAAGATGAACATGTACTTCTAC
GGCACCATGCTCGACAAGACCCAAAAGGACGAACCGGCCGGCCGATCCAT
CCGGCAAGTCTACCAAGCCGACGCAGTTTCGGCCCTCACCCCCTTGTCGT
CTGACCACTGGGAATCTTTTCACACCTACCGCCTCGAGTGGATGCCAGGC
ACGGAGGGATACTTGGCTTGGTTCCTGGATGGGAAGAAGCTTTACGACAT
TCCCGCGTTTTCCGTCCAAGGGGCGACGGGAGCCCAGATCCCAGAAGAGC
CGAGTTACCTGATTCTTAATACTGCCGTGAGTACCACGTGGGGCTTTCCC
CAGGCCTGTCCCGAGGGTTGTGCGTGTGATTGCTTCGACTGTGCCAAGCC
AGAGTGCAGGTGCAGCCTTCCCGTGGGCCTGTGTGAGATGCTGCCTGCTT
CCATGCTGGTGGATTACGTCCGGGTGTATCAATTGGAGGACGACGAGAGG
CATTTCCTGGGGTGTGACAACCCGAGGTACCCTACCCGGAAGTTTATCCA
GGCGCATCGCTGGCGCTATCAACGgtacggtcctccctccctccctccct
ccctccctccctccctccctctctccctcccactacagccaaccacatac
cctccttctctcgcacgctcgcggtcccttccctccctccctccctccct
ccctccctccctccctccctccctccctagTGACGACGAGGATGTTCCCC
TTCTCCCCATCCTCAAGGGTACTGGTGCCTGTACCGGCGAAGACGATTGT
GGACCCGGAGGGGCGTGTCACGCGAGAAAGAAGACCTGTGTCTGCCGGGA
AGGATGGACGGGGCCGCAgtaagtgaaggagggagggagggagggaggga
agggagaacttgcatctttcactcgttttgttcgcgtgcttcccctccca
agttgcactaatctttccttcctccctccccccctccctttctccctccc
tcccttgcccctgcttggcagCTGCAAACAAAAAGCGTACCACGATGATG
ACGCCCGTGGCAAGGTTTATCTGACAATCAGAGCTCCCTCCATGCCGCCC
GTTACGCTGGCGGGGTCGCTGGTGGCGCTGGGTGTGGTCTTGGTCTTCGC
GGTGTGGATGTCGGTGAAGGACCGAGAGAAGGAGGAGGAGGAGGCGGCGG
AGGCGAGGAGGGAAAGGGAGAGGGGGGAGGGAGAGGGATGGAATCGGTAG
back to top

protein sequence of NO16G00500.1

>NO16G00500.1-protein ID=NO16G00500.1-protein|Name=NO16G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=594bp
MPLLPLLLPLLLSLPSALAGWVDPDSPLSARKTHSYRDPRLPPLKLVMSD
EFNVVNRTFADGDDPTWTAGDHSDDARTSVGKGALIFYNHSYVSTTDEGY
LKITTTGEATKWKGFNPFTKKYEVFEKEFRGGMVNSWNKFCFSGGVVEVR
LRLPGKSDTGGLWPAFWLMGNLGRATYEHSTNMMWPWSYNRCDRDRQEAQ
EISGCDRTTHWDLLQNQGRGATEIDVMEAMPGKQVSKGDMGDLGVGLPYM
SSTLQISPGVPKNRPVPGKNFTELGADWSWYDGLTFGETSKMNMYFYGTM
LDKTQKDEPAGRSIRQVYQADAVSALTPLSSDHWESFHTYRLEWMPGTEG
YLAWFLDGKKLYDIPAFSVQGATGAQIPEEPSYLILNTAVSTTWGFPQAC
PEGCACDCFDCAKPECRCSLPVGLCEMLPASMLVDYVRVYQLEDDERHFL
GCDNPRYPTRKFIQAHRWRYQRDDEDVPLLPILKGTGACTGEDDCGPGGA
CHARKKTCVCREGWTGPHCKQKAYHDDDARGKVYLTIRAPSMPPVTLAGS
LVALGVVLVFAVWMSVKDREKEEEEAAEARRERERGEGEGWNR*
back to top
Synonyms
Publications