NO16G00440, NO16G00440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00440 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.]) HSP 1 Score: 720.7 bits (1859), Expect = 2.200e-204 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0 Query: 1 MSPAAQHKLVSPFSSLDPSALPPPLMTAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGKEDKATMTDRKRHMELNILASDREEVKDEFRVKKE 356 MSPAAQHKLVSPFSSLDPSALPPPLMTAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGKEDKATMTDRKRHMELNILASDREEVKDEFRVKKE Sbjct: 1 MSPAAQHKLVSPFSSLDPSALPPPLMTAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGKEDKATMTDRKRHMELNILASDREEVKDEFRVKKE 355
BLAST of NO16G00440 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 230.7 bits (587), Expect = 7.000e-57 Identity = 127/294 (43.20%), Postives = 178/294 (60.54%), Query Frame = 0 Query: 28 AQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGK 322 ++G F ++Q+IPA+ PFY +EK +D++ + ++ WVP+ LY + G M++RK FDLK L WNL+LSL S G VRV HL+YL + G C +PE Y + A G W F +SKL EL+DT F+VLRKKPL FLHWYHH TVLL +WF + P + F+A+NYS+H +MY Y+FLMA++ P W P ++T+ QISQM VG + + +Y A G+ CA+D ++VA +MYSTYL LF +F V+R+ K++ A A V K Sbjct: 36 SRGSTFTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKG---LGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVG---VATAAFYIMKIRA-----GEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKAGVSK 318
BLAST of NO16G00440 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 230.3 bits (586), Expect = 9.100e-57 Identity = 138/320 (43.12%), Postives = 183/320 (57.19%), Query Frame = 0 Query: 7 HKLVSPFSSLDPSALP---PPLMTAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTW--VPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGH-VTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY-AGQQKRKGAREVAVV 320 H L FS L +P P VPF ++Q P LSPFYT YEK+F A +S++ ++TW +PL +Y G K M R + KT L WNL LS+ SF G +R HLL+ ++ F+DTIC P TY + A GLW ++F SK+ ELVDT+F+V RK L FLHWYHH TVLL W + VT + LYF+A+NYS+H VMY Y++L AIK P W P +TVAQISQM VG+ + V S YY Y + + C + + + + LMY +YL LF FFV+R+ G + R G AV+ Sbjct: 2 HNLSEAFSKLFWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTT---LPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTD-------PEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVL 310
BLAST of NO16G00440 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 229.2 bits (583), Expect = 2.000e-56 Identity = 127/294 (43.20%), Postives = 180/294 (61.22%), Query Frame = 0 Query: 31 VPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRK-----AFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEAT-YADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY-AGQQKRKGAREVA 318 V F ++Q IPAL PFYT +EKHFD +A F + WVP++A LY +F G K + RK +L LWN L+L S AGA+RV H L+L + F++T+CE+P+A Y D A GLW ++FTVSK+ EL+DT+ +VL+ K +FLHWYHH TVLL +WF + P LYF+A+NY++H VMY Y+FLM ++ P+W +P+++T+ QISQM VG+ V + Y+ CA+ +I MY+TYL FV+FFV+R+ A KR ++A Sbjct: 25 VRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFT---HKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQ---------ADPSCAVVRDLIPWCAAMYATYLYFFVEFFVERFLAASTKRTPVSKLA 306
BLAST of NO16G00440 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 226.9 bits (577), Expect = 1.000e-55 Identity = 141/335 (42.09%), Postives = 188/335 (56.12%), Query Frame = 0 Query: 7 HKLVSPFSSLDPSALP---PPLMTAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTW--VPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGH-VTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY-AGQQKRKGAREVAVVGKEDKATMTDRKRHM 335 + L FS L +P P VPF ++Q P LSPFYT YEK+F A +S++ ++TW +PL +Y G K M R + KT L WNL LS+ SF G +R HLL ++ F+DTIC P TY + A GLW ++F SK+ ELVDT+F+V RK L FLHWYHH TVLL W + VT + LYF+A+NYS+H VMY Y++L AIK P W P +TVAQISQM VG+ + V S YY Y + + C + + + + LMY +YL LF FFV+R+ G + R G AV+ TMT + + M Sbjct: 2 NNLSEAFSKLIWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTT---LPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTD-------PEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVL------TMTKKIKDM 319
BLAST of NO16G00440 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 226.1 bits (575), Expect = 1.700e-55 Identity = 122/291 (41.92%), Postives = 174/291 (59.79%), Query Frame = 0 Query: 30 GVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPA-LYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVV 320 GV + L P L Y +E+ +D A+ ++ +P++A Y G M+ R A+ + IL +WNLSLSL S+ GA+R L Y L+ +S RD +C+ P A Y +TGLW +F +SK EL+DT F+V+ KKPLIFLHWYHH TVLL W +VT +P+ L+F+ +NYS+H VMY Y+FLMA+K P+WFNPM++T Q+SQMF+G+ V +++ YY +GK C I VA +MY +Y LF +FFV RY + + A++ VV Sbjct: 19 GVHYAEFSCLHPLLGATYLPFERFYDPVATLTWMQDRPMIPIIACVAYVVLIVLGRAYMKDRPAWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTT---YSLRDNLCDDPAALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYY-----YSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARYYKVKVKGDAKKKKVV 301
BLAST of NO16G00440 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 223.0 bits (567), Expect = 1.500e-54 Identity = 129/311 (41.48%), Postives = 178/311 (57.23%), Query Frame = 0 Query: 13 FSSLDPSALPPPLMTAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTW--VPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGH-VTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY-AGQQKRKGAREVAVV 320 F DPS + P VPF ++Q P L P YT YEK+F A ++++ + TW +PL +Y G K M R + KT L WNL LS+ SF G +R HLL+ ++ F+DTIC P TY + A G+W ++F SK+ ELVDT+F+V RK L FLHWYHH TVLL W + VT + LYF+A+NYS+H +MY Y++L AI P+W P +TVAQISQM VG+ + S Y+ Y + + C + + + A LMY +YL LF FFV+R+ G + R G + AV+ Sbjct: 13 FLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYA-STYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVAT---LPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTD-------PEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVL 312
BLAST of NO16G00440 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 215.3 bits (547), Expect = 3.000e-52 Identity = 114/292 (39.04%), Postives = 176/292 (60.27%), Query Frame = 0 Query: 33 FHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAR-EVAVVGKED 324 F WQL P L FY +EK+F+ F F+ + WV ++ A+Y P M+ R +L T L WNL L++ S GAVRV HLL+ +S +F+ T+C +P D ATGLW +FT+SK+ EL+D++++ L+ + IFLHWYHH +VL +W H P +YF+A+NY++H VMY Y+FLMAIK P+W NP+++T QI+QM VG +++SC+ Y+ M CA+D ++ ++Y++YL LF++F ++R+ + R G +VA K++ Sbjct: 39 FIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMST---HTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVG---VIISCFGFYY-----SSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNARAGQEGKVAASAKKN 319
BLAST of NO16G00440 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 213.0 bits (541), Expect = 1.500e-51 Identity = 114/267 (42.70%), Postives = 157/267 (58.80%), Query Frame = 0 Query: 39 LIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTP-ALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY 305 L P + YTS+EK +D ++ +P+ A +Y YYG R ++ + L +WNL LS+ SF G +R HL + L+ SFRD +C P TY +TGLW +F +SK EL+DT F+V+ KKPLIFLHWYHH TVLL W +VT +P + F A+NY++H MY Y+FLMA++ P+WFNPM +T QISQM VG+ ++S YY + A+ CA+D +A LMY +YL LF +FF RY Sbjct: 22 LYPQVEHLYTSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLT---HLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVS-YYYFLTDAE-------CALDRGNNIAAFLMYGSYLFLFCQFFFSRY 277
BLAST of NO16G00440 vs. NCBI_GenBank
Match: XP_013227826.1 (fatty acid elongation protein, putative [Eimeria tenella] >CDJ36988.1 fatty acid elongation protein, putative [Eimeria tenella]) HSP 1 Score: 210.7 bits (535), Expect = 7.500e-51 Identity = 126/298 (42.28%), Postives = 176/298 (59.06%), Query Frame = 0 Query: 21 LPPPLMTAQGVPFHPIW---QLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPA-LYFMAINYSIHGVMYMYFFLMA-IKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYF---------EGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY 305 LPP +T P +W + P L PFY S+E F A A+ + + +V LA LY FCY G K M++R+ FDL+T L WNL+L++ SF G VRV L L+ +G F ++ P Y A G W ++F SK ELVDT+F++LRK+PL FLHWYHHATVLL +W + PA +YF+A+N+S+H VMY Y+FL A +++ W +++TVAQISQMFVG+ V +S Y+ + E Q + + G I + + CLMYSTY LF ++FV+RY Sbjct: 16 LPPGGLTT--YPAQSVWVMHERFPFLKPFYFSFETEFSAAAALSWNIANYYVAPLAACLYLLFCYCGTKYMKNREPFDLRTPLKYWNLALAIFSFMGMVRVVPQLACLVCSYG---FEASLASPPVYAYGHGAAGFWTLLFIYSKFFELVDTVFIILRKRPLSFLHWYHHATVLLYTWDAYTWEQPAGIYFVAMNFSVHAVMYFYYFLAAQLRRPLSW--GIFVTVAQISQMFVGVGVTFVSMYFAFSFPYRAFWRKEQIQ-DALSHGHYITPKNLYWACLMYSTYFYLFAEYFVKRY 305 The following BLAST results are available for this feature:
BLAST of NO16G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00440 ID=NO16G00440|Name=NO16G00440|organism=Nannochloropsis oceanica|type=gene|length=1068bpback to top protein sequence of NO16G00440.1 >NO16G00440.1-protein ID=NO16G00440.1-protein|Name=NO16G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=356bpback to top Synonyms
Publications
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