NO16G00260, NO16G00260 (gene) Nannochloropsis oceanica

Overview
NameNO16G00260
Unique NameNO16G00260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1867
Alignment locationchr16:95468..97334 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:95468..97334 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00260.2NO16G00260.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G00260.1NO16G00260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00260.2NO16G00260.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G00260.1NO16G00260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00260 ID=NO16G00260|Name=NO16G00260|organism=Nannochloropsis oceanica|type=gene|length=1867bp
ACGCGAGGCCTACGAGCAGTCTGTCATTTGGAGGTGCAGAGTGGAAAGCA
AGGGAGTGAGGCAAGAGTGGCCAAGAAATGATGGCATACTTGCGCGACCA
TGACGCACTGCACTGCAACGAGTGGGGTCGGGAGAGCTTTATCCCCACGG
CAACTCAACATCACACGATAGCACACGATTATTCATGCCAGCATAAAGAT
TCGTCTTCCGCCCCACACGTACACAGGCAGGCCCTGAGTGTAGGCAGCTA
CATGAAGGCTTTAAATCCTCCGCACGCGAGTTTTGGATCTCTTCTTTGTC
TGGTGAGGAAATGAAGCAAGGCTCCGGCATGGACCGACGAAGCGCTGCTG
ATCTTGCTTTTGCCTCATCACAAAGATCTTGTTGGATTGAAAGGAAAGCA
TCCGGTACCCGACCAGAGCGACCAAACCGCGCGCCTGGCCAAATAAATGG
TACCTAAGACCTGGTGACTCAGGGGCACCAGACAGAAGGGTGAAAAGGGC
CCTGTGTCACAGAAGGCGAAAATCAAGGGCAGGGCTCTACCCGAGAGCCC
TGCCGTTACTAAGGAAGGCGATGGAGGATGGTGGGAGGGAGCAGCCGCGA
GCTGTGTGGGCGCAAGTCCTGCGCTGCTTGGCAGAATGAAATGGCTTATG
TTCTTGTTCTTAGGAATAGCCTGTACAGGCCTCCCATTTTTCGTCATGTG
TTCAGCACTCATCACGCATCCATGCCTTTTTATATCCCACCACCACACAT
CAACAACAGGAAGGCTTCGCGCATTCTGCGAGTGATGGTCGACCCTGCCA
ATGGCGCCGCTTCAGTTCCGGAGCCGACCGGCAAGAAAAAACAAGCAGCA
GGAACAGGAGGAGAAGGAGGAAGAGGGGAAGGAGGAGGAAGAGGAGAAGG
GAGCGGAAGAGGAGGAAGAGGGAAAGGAGGAGATGAAGGATTTTCAGCAA
GCGGCAGCTCAAGGTATGTCATGACAATGGGGAGGTCTAGAGGAGGGATG
GGTGGTCCCAGTCATTAAATCACACACGCTATCATCAGAATATGGGTGAA
TCTTTAGATGTTTCGATGTCCTGGAGGCTTAACGATGGTCCACACCGATC
GATCTTCCGACAACAACGATCGATGTGATTCATCTCGAGGGGTGGGTAGA
GCGATGGATACATAGTAATGTCAGTTTTGCTTACCTCCTTTTATGCACAA
TAGCGCGGCTGTCTCATCTCCTCCGCCCTCGGTACCTTGCAACCCCCCAC
CCACAATCACACTTGGCGGGGTCACCAAGAAAAAGgtgggtgagtgcgaa
aggaatatttttgctttcctccgtcacttcttcatgccctcttgtccctt
ttctgcttttgtcacgtacgcatgcgccgcatcaaccgcctttccgaccc
atcattctgtcctgttcgtttgccctccgatcctctggttcccacttgag
ccagtgttaccctacctacatcctccgtccctcttttcctccctctctct
cttcctccctcagTTCCAACCCCGCGCACCGCTTATCAAAAAGGAGCCCC
CTTCGTTCTCCTCCTCCGACTCCTCCTACCCGTCTCCCTCCTCCCTGGCC
ACGACAAAATCTTCTTTTCGACGGGCCGGCGGAGGGGGGGAGAGGAACGG
GGAGGGAAGCACTACGAGAGGAGGGCGGGGGGGAGGGCGAGGGAGAGGAA
GGGCGGGTGGGCAGATCATGTCGACTGGGAGTGTATATTTTTCGGGGGGG
AATACGGCAGGAGGTGAAGGAGGAGAGAGGGGAGGAGGAGGGGGAGCGAA
AGCAGCGGGAGGAAAGAAAGGTGGAGTTGTCGGTGAGGGCGAGGGAGGGG
AGGGCAAGGGATTGTGA
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protein sequence of NO16G00260.2

>NO16G00260.2-protein ID=NO16G00260.2-protein|Name=NO16G00260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=149bp
MHNSAAVSSPPPSVPCNPPPTITLGGVTKKKFQPRAPLIKKEPPSFSSSD
SSYPSPSSLATTKSSFRRAGGGGERNGEGSTTRGGRGGGRGRGRAGGQIM
STGSVYFSGGNTAGGEGGERGGGGGAKAAGGKKGGVVGEGEGGEGKGL*
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protein sequence of NO16G00260.1

>NO16G00260.1-protein ID=NO16G00260.1-protein|Name=NO16G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=274bp
MVGGSSRELCGRKSCAAWQNEMAYVLVLRNSLYRPPIFRHVFSTHHASMP
FYIPPPHINNRKASRILRVMVDPANGAASVPEPTGKKKQAAGTGGEGGRG
EGGGRGEGSGRGGRGKGGDEGFSASGSSSAAVSSPPPSVPCNPPPTITLG
GVTKKKFQPRAPLIKKEPPSFSSSDSSYPSPSSLATTKSSFRRAGGGGER
NGEGSTTRGGRGGGRGRGRAGGQIMSTGSVYFSGGNTAGGEGGERGGGGG
AKAAGGKKGGVVGEGEGGEGKGL*
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Synonyms
Publications