NO16G00190, NO16G00190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO16G00190 vs. NCBI_GenBank
Match: EWM22815.1 (hypothetical protein Naga_100437g2 [Nannochloropsis gaditana]) HSP 1 Score: 354.0 bits (907), Expect = 8.800e-94 Identity = 237/566 (41.87%), Postives = 322/566 (56.89%), Query Frame = 0 Query: 8 MPSPPSLVPTAVELLRLAHGTLLRPQQQEQGQPQAEAVAALRAHLAEDDTASMKTDLKALTRLLGQATMD-GEXXXXXXXXXXXXXXXXXXXXRLATAFSETLNLTGGRRKLSMSLTFSSLQPSAKDDKQVHASAMHGAGVVSPFMSPSYWASPSNPLTTPSLLNEIFDYVGLIA---SPPSISLSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMAAVVAARTNLGHLACVCRLWKVTASEDRYWRPLSTAFLPMLGTAPTTTHMPPATSTPSSPSQLQSQSPCRDALVQYGKCLAMPTVRDGDDWQAHLLLSFEILDERDSLRLFSASGPVDLILSSESGLTALRLTGTKRTEVCCPFSAASRDPEKRRFKNIKDFFANGSQPQFPAALRVRVMGKDTRTGKQALLYTSHPGTQRSVKVSTLQYWQQFLAADSLFVWEPWSRWSTGDVTQTNEVVEISASFYVSPVKIVSHDDRMGEDVAGGMDDAAEAVQDGDPDPPQNASALSRERAREQLHVIMGGDEGAYSSHNSFVALQFRTLDASIPARFIKAALAAADST 570 M +P SLV TA LLRL+ TLL Q + Q + AALR++ ++ D+ + ++ +A + G+ XXXXXX L FS+ + T ++ S++ S P KD + A +HGAG + S + P++PL TPSLL EIF ++G +A + P ++ S + A+ A R NL L V RLW+ TAS+DR+WRP+ + LP L + + ++ P R A ++Y +CLA+P V DG++W AH+LLSFEI D +DS+RLF ASGP+++I S+ESGLTALRLTGTKR+EVC PFSA SRDP +RF+NI + + +P FP LRVRV+ D RTG QAL+Y S P T+RSVK STL +W++FL SLFVWE WSRW + TQ E VEIS SFYVSPV + + +AE +DG P +A+ SR+RA +Q HVIMGGDE AY++HNSFVA+QFRTLDAS+PAR+IK AL + +T Sbjct: 72 MEAPLSLVHTAFALLRLSRETLL---QNQPDNAQEDVKAALRSYFTKNVAHREIADISSYIDVVQKALAESGDGIMDNNEDHATVTXXXXXXANLLVDFSD--SSTSATQQKSITPFCKSPPPKLKDHRD--AYGVHGAGKI---RSTPLHSFPTDPLATPSLLTEIFSFLGTVAPYGAEPVLNGS-----------------------GHPCRMSAGPGSETTALQAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTL-------------TMDAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQ--EAVEISTSFYVSPV-------QKSPVSSASSTGSAEEREDGWMHFP-SATGTSRQRALDQPHVIMGGDETAYANHNSFVAVQFRTLDASVPARYIKGALERSRAT 581
BLAST of NO16G00190 vs. NCBI_GenBank
Match: XP_005853741.1 (hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >EKU22622.1 hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >EWM30397.1 hypothetical protein Naga_100026g9 [Nannochloropsis gaditana]) HSP 1 Score: 131.0 bits (328), Expect = 1.200e-26 Identity = 91/275 (33.09%), Postives = 134/275 (48.73%), Query Frame = 0 Query: 233 RTNLGHLACVCRLWKVTASEDRYWRPLSTAFLPMLGTAPTTTHMPPATSTP----------------SSPSQLQSQSP------CRDALVQYGKCLAMPTVRDGDDWQAHLLLSFEILDERDSLRLFSASGPVDLILSSESGLTALRLTGTKRTEVCCPFSAASRDPEKRRFKNIKDFFANGSQPQFPAALRVRVMGKDTRTGKQALLYTSHPGTQRSVKVSTLQYWQQFLAAD------SLFVWEPWSRWSTGDVTQTNEVVEISASFYVSPVK 480 R LG LA VCR W+ A DR+W+P+ P L A S P + S S SP R L+Q+G+CL +R G W + LSF++ DE+D RLFS++GP+ ++ G+TA++LTG +R V PFSAASRD +I++ F G +P + +RV +D RTGK ALL++S T+R W + L D +L V + WSR + + T+ +++ FYV+PV+ Sbjct: 258 RKQLGDLALVCRQWRDLAQADRFWKPVVLQLFPRLSPALADHDEEDGASGPDPDAAALTEAAVDGAGAGASSEPSTSPGGRAGWHRKYLIQFGRCLFDRPIRQG-PWHEGITLSFDLHDEQDGTRLFSSTGPIRFTGTTIPGITAMKLTG-RRRRVTAPFSAASRDRGLGNLSSIEELFQEGDSRDYPVSFTIRVTARDERTGKMALLFSSAKRTKR---------WVEPLGEDMGVPQGTLLVNQGWSRVT---IPSTDLAMQMLTVFYVAPVE 518
BLAST of NO16G00190 vs. NCBI_GenBank
Match: EWM22694.1 (hypothetical protein Naga_100340g3 [Nannochloropsis gaditana]) HSP 1 Score: 123.6 bits (309), Expect = 1.900e-24 Identity = 88/253 (34.78%), Postives = 129/253 (50.99%), Query Frame = 0 Query: 232 ARTNLGHLACVCRLWKVTASEDRYWRPLSTAFLPMLGTAPTTTHMP-----PATSTPSSPSQLQSQSPCRDALVQYGKCLAMPTVRDGDDWQAHLLLSFEILDERDSLRLFSASGPVDLILSSESGLTALRLTGTKRTEVCCP-FSAASRDPEKRRFKNIKDFFANGSQPQFPAALRVRVMGKDTRTGKQALLYTSHPGTQRSVKVSTLQYWQQFLAADSLFVW-EPWSRWSTGDVTQTNEVVEISASFYVSP 478 AR L L+ V R + A + YWRP++ LP+L A H P + + + R L++YG CL G+ + LSFE+ D D LR+ SASGP+ + + + G T+LR+ GT R EV P FSAASRDP +RRF +++D+F G P+F AAL VRV D RTG+ ALL+++ + + L YW+ FL S+ + + WS E + ++ F+V P Sbjct: 194 ARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVL--AVPRRHSPRRQXXXXXARGAGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTRKDAAYLTE-APLAYWEPFLPEGSISCFLDHWSPLMC--PAYDGESMTVTIGFHVCP 441 The following BLAST results are available for this feature:
BLAST of NO16G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00190 ID=NO16G00190|Name=NO16G00190|organism=Nannochloropsis oceanica|type=gene|length=2084bpback to top protein sequence of NO16G00190.1 >NO16G00190.1-protein ID=NO16G00190.1-protein|Name=NO16G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bpback to top Synonyms
Publications
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