NO16G00080, NO16G00080 (gene) Nannochloropsis oceanica

Overview
NameNO16G00080
Unique NameNO16G00080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3099
Alignment locationchr16:27267..30365 -

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:27267..30365 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0036297interstrand cross-link repair
GO:0016567protein ubiquitination
Vocabulary: Cellular Component
TermDefinition
GO:0043240Fanconi anaemia nuclear complex
GO:0043240Fanconi anaemia nuclear complex
Vocabulary: INTERPRO
TermDefinition
IPR026848Fancl
IPR026850FANCL_C
IPR019162FancL_WD-rpt_cont_dom
Homology
BLAST of NO16G00080 vs. NCBI_GenBank
Match: EWM22827.1 (zinc finger protein [Nannochloropsis gaditana])

HSP 1 Score: 251.1 bits (640), Expect = 6.200e-63
Identity = 113/196 (57.65%), Postives = 139/196 (70.92%), Query Frame = 0
Query:  240 MDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPISLAVPA 436
            MDD D ++WVMGG +ERFRR S +RR+VLHA ASCV+ ID  APYK   ++F+GPEA I  W+ R+Y  +GDWDT++ PR+NLEAILG  FP PP                  YVEECCICYAYRL D   KE G+ PT+ CENERCRRL+H +CLRQWLQTLPD K++ G + +  TL+G+CPFC +PISL V A
Sbjct:    1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPP---THSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEVDA 193          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: CEO95787.1 (hypothetical protein PBRA_004500, partial [Plasmodiophora brassicae])

HSP 1 Score: 153.7 bits (387), Expect = 1.300e-33
Identity = 97/331 (29.31%), Postives = 149/331 (45.02%), Query Frame = 0
Query:  100 YRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPIS 431
            Y +++R+++ +GW+ I D+            +   ++L+I ++D   R+HE +V L P       P T P C V +P              G +E   P S                  L    +  E+ +     FW V++D D + WV+  E +   R S  RR+ +  H S +V I+  +P++ CD +F+G E+ + P  ER+   +  WDTS+ PR NLE IL ISFP  P                  +  EC ICY+           G      CE+ RC R FH  CL +WLQ++P ++       +  TL GACP+CS P+S
Sbjct:  461 YERVVRDIERVGWERIVDV------------DRSLLSLTIRIMDQASREHEFVVRLTPDY-----PATGPECVVDVP--------------GDVEI--PWSAQS--------------SLLDVVQNVEKIIGQFDSFWSVLEDIDAHCWVI--EPDHATRASRSRRIAIGQHCSILVDIEPESPFRVCDCRFLGAESVVNPLRERLNRDLDRWDTSRMPRVNLERILSISFPGKP-----------APGAQDEFQLECGICYSV-------SRDGVVADRVCEDARCGRPFHNQCLFEWLQSIPSSR------QSFSTLFGACPYCSAPLS 718          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: XP_002610558.1 (hypothetical protein BRAFLDRAFT_57071 [Branchiostoma floridae] >EEN66568.1 hypothetical protein BRAFLDRAFT_57071 [Branchiostoma floridae])

HSP 1 Score: 152.1 bits (383), Expect = 3.900e-33
Identity = 98/341 (28.74%), Postives = 153/341 (44.87%), Query Frame = 0
Query:   96 PPSQYRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPISLAVPAS 437
            PP  + QL++E+D LGWD +  I PS            + +L +   DA  R+H + ++L  H  +   P   P C   LP              G + F+                      LQ    QFE++L   QDFWD M++ D  +WV+  E E+     T RR+ L  +AS  +T+D + P    + +F+G +  I P  + +  ++  WD  +    NL+ +LG+ FP+P                   +   C ICYAYRL       G E P   C++ RC R FH  CL +WL+ LP T++      + + + G CP+CS PI++ + A+
Sbjct:   91 PPQYFTQLVQEIDKLGWDRLVYIDPS------------FKSLQVQCRDACQREHILTINL--HNQY---PQMTPTCAADLP--------------GKVNFK----------------WSQQDSLQGVLHQFEKALAQYQDFWDNMEELDKSTWVL--EPEKPSCKDTVRRIALGNNASVQITVDPAHPRMLPECRFLGADHVINPIKQSLNANLHCWDPRQTLLPNLQNVLGVDFPSP------------ANSSKEDFNMACSICYAYRL-------GEEIPDRACDDPRCSRPFHATCLIEWLRALPSTRM------SFNVIFGECPYCSKPITVKMTAA 357          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: OAQ25702.1 (hypothetical protein K457DRAFT_140876 [Mortierella elongata AG-77])

HSP 1 Score: 152.1 bits (383), Expect = 3.900e-33
Identity = 111/401 (27.68%), Postives = 166/401 (41.40%), Query Frame = 0
Query:   39 KRSLERCGDVASFSAELEDMLSTPPSSFRPPAXXXXXXXXXXXXXXXXXXXXXXXTVPPSQYRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQ---SFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGI--SFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPISLAVP 435
            ++ +E   D+ASF  EL D L    S+ R                            P   +  ++ +LDALGWD +  +    S           + + +C  DA  RKH +    PP       +  P  +P C+        +   + G   G L  +   +                  LQAA RQ E  L   Q+FWDVM DFD  +WV+  + E+  R    RR  L  H S  VT+   +P    D +  GP A+I P   ++Y + G WD  K PRENLE +L +   FP+P                       C ICY++R E       G+ P   C   +C++ FH +CL +WL+++P T+       + HTL G+CP+C + I+ + P
Sbjct:   87 QQKMEEAKDMASFLVELVDTLEVIMSNKRAKGDKEK---------------------PLRYWTHVMEQLDALGWDRVTLVDQDLSR----------VQIELC--DAAQRKHLITARFPPAYPTIPLTIAPLEIPECK------DDQLAAQRGLNVGGLSSKQGSA------------------LQAAIRQAEAQLEIFQEFWDVMQDFDERTWVI--DPEKPTRADKMRRCALGNHCSIQVTVQPLSPRSMPDTRLFGPTASIEPMRTKLYQNAGLWDVKKLPRENLEVLLELEGGFPSPISTNKDDINVG------------CGICYSFRFE-------GQVPDQLCSQAKCQQPFHRVCLYEWLRSVPTTR------QSFHTLFGSCPYCGETITTSAP 403          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: XP_005651697.1 (hypothetical protein COCSUDRAFT_64092 [Coccomyxa subellipsoidea C-169] >EIE27153.1 hypothetical protein COCSUDRAFT_64092 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 147.1 bits (370), Expect = 1.300e-31
Identity = 104/343 (30.32%), Postives = 148/343 (43.15%), Query Frame = 0
Query:   96 PPSQ-YRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAP-YKACDIQFIGPEATIRPWSERM-YTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEG-----GETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPIS 431
            PPS  Y  L+ E+DA+GWD +  + P+ S+            L I + DA GR H + V LP     ++ P   P     LP           E   L  ++P  S                  LQ   R +E ++ + QD W  +DD D  +WV+  E E+       RR+ L  H S ++ +D + P  +  D++F+G EA   P   R+       WD  + PRENLE +L +  PT                       +CCICYAYRL   +         GE P   C N RC R FH  CLR+WL  LP ++       + +T+ G CP+CS PI+
Sbjct:  107 PPSTFYTGLIAEIDAVGWDRLAWLCPNLSA------------LHIRISDAAGRDHMVKVQLP-----AAYPEAAPLVSAQLP-----------EQVKLPPWQPGAS-----------------SLQDLIRHYEAAIASLQDLWACLDDLDREAWVL--EPEKPTPADAHRRIALGGHCSLLLELDPARPRARPPDLRFLGSEAAAAPMRTRLRAADAPPWDPGRLPRENLERLLQMKLPTRSTSAQDDISG------------DCCICYAYRLPPAQPPGAGSATLGEVPDQSCGNPRCARPFHGRCLREWLLALPTSR------RSFNTVFGECPYCSQPIT 384          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: XP_009841914.1 (hypothetical protein H257_15489 [Aphanomyces astaci] >ETV68689.1 hypothetical protein H257_15489 [Aphanomyces astaci])

HSP 1 Score: 146.4 bits (368), Expect = 2.100e-31
Identity = 98/346 (28.32%), Postives = 147/346 (42.49%), Query Frame = 0
Query:   96 PP--SQYRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHL--------QAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTI-DVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPIS 431
            PP  S Y  LL+++  +GWD + +++              W  L + ++D+ GRKH +   +      +S P++ P C V +P                 E  PPL                 FHL            +Q +  L   QDFWDV+DD D    V+  E +R  R   +RRL L    S    + D   P    D+ + G +A + P  E +Y ++  W  + K R NLE +LG+ FP+P                   +  EC ICYA+RL+D         P   C++  C R FH  CL +WLQ +P ++   G      T+ G+CP+C +PIS
Sbjct:  105 PPKLSYYEALLQDVATIGWDRVLEVNTDDHGH--------WNGLHVQLVDSHGRKHAVSFRMD-----ASYPSSPPTCGVDVP-----------------EPMPPLQWSPLKPPSLQHAIDQVFHLFLFFSFKYSNNNKQVQAHLETFQDFWDVLDDIDKKCCVL--EPDRPTRGCKRRRLALRPSVSIQFDVPDPVLPRALVDVVWFGNDAAVTPLRETLYANLSKWKPADKLRRNLERVLGVRFPSP------------RTAAKNEFALECGICYAHRLDD-------RIPDRVCDSANCARSFHGSCLLEWLQAIPTSRKSFG------TVFGSCPYCREPIS 393          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: XP_019647647.1 (PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Branchiostoma belcheri])

HSP 1 Score: 145.6 bits (366), Expect = 3.700e-31
Identity = 93/336 (27.68%), Postives = 148/336 (44.05%), Query Frame = 0
Query:   96 PPSQYRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPISL 432
            PP  + QL++E+D LGWD +  I PS            + +L +   D+  R+H + ++L      +  P   P C   LP                + F+                      LQ   +QFE++L   QDFWD M++ D  +WV+  E   +R   T RR+ L  +AS  +T+D + P    + +F+G +  I P  + + T++  WD  +    NL+ +L + FP+P                   +   C ICYAYRL       G E P   C++ RC R FH  CL +WL+ LP T++      + + + G CP+CS  I++
Sbjct:  104 PPQYFSQLVQEIDQLGWDRLAYIDPS------------FRSLQLQCRDSRQREHILTINL-----HNQCPQMTPTCTADLP--------------AKVNFK----------------WSQQDSLQGVLQQFEKALAQHQDFWDTMEELDRSTWVLEPEKPSYR--DTVRRIALGNNASVQITVDPAHPRMLPECRFLGADHVINPMKQSLNTNLHYWDPGQTLLANLQNVLEVEFPSP------------ANTSKEDFNLACSICYAYRL-------GEEIPDKACDDPRCSRPFHATCLIEWLRALPSTRM------SFNVIFGECPYCSKSITV 365          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: XP_009841915.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV68690.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 145.2 bits (365), Expect = 4.800e-31
Identity = 98/338 (28.99%), Postives = 146/338 (43.20%), Query Frame = 0
Query:   96 PP--SQYRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTI-DVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPIS 431
            PP  S Y  LL+++  +GWD + +++              W  L + ++D+ GRKH +   +      +S P++ P C V +P                 E  PPL                   LQ A  Q +  L   QDFWDV+DD D    V+  E +R  R   +RRL L    S    + D   P    D+ + G +A + P  E +Y ++  W  + K R NLE +LG+ FP+P                   +  EC ICYA+RL+D         P   C++  C R FH  CL +WLQ +P ++   G      T+ G+CP+C +PIS
Sbjct:  105 PPKLSYYEALLQDVATIGWDRVLEVNTDDHGH--------WNGLHVQLVDSHGRKHAVSFRMD-----ASYPSSPPTCGVDVP-----------------EPMPPLQWSPLKPP----------SLQHAIDQVQAHLETFQDFWDVLDDIDKKCCVL--EPDRPTRGCKRRRLALRPSVSIQFDVPDPVLPRALVDVVWFGNDAAVTPLRETLYANLSKWKPADKLRRNLERVLGVRFPSP------------RTAAKNEFALECGICYAHRLDD-------RIPDRVCDSANCARSFHGSCLLEWLQAIPTSRKSFG------TVFGSCPYCREPIS 375          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: KFH72826.1 (hypothetical protein MVEG_00051 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 144.1 bits (362), Expect = 1.100e-30
Identity = 96/344 (27.91%), Postives = 150/344 (43.60%), Query Frame = 0
Query:   96 PPSQYRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLP---PHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGIS--FPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPISLAVP 435
            P S +  +  +LD++GWD +  +            ++    + I + D  GRKH +        P+  F+  P  +P+C                    L +   P +                  L+ A RQ E+ L   QDFWDVM DFD  +WV+  + E+  R    RR  L  H S  +T+D  +P    + +  GP A + P    ++ +   WD ++ PRENLE +L ++  FP+P                      EC ICYA+R E       G+ P   C + +C+R +H +CL +WL++LP T+       + HTL G CP+CS+ I+  VP
Sbjct:  113 PVSYWTHITEQLDSVGWDRVAHL------------DQEMAKVQIELSDQAGRKHILTACFSPAFPNVPFTVEPLAVPQC---------------DNSNNLDQETIPTNQLSLANGS---------SLRDAVRQAEKKLALFQDFWDVMQDFDDKTWVI--DPEKPTRSDRVRRCALGKHCSIQITVDPLSPRTLPESRLFGPPALVDPMRVNLHRNAPLWDKTRFPRENLENLLELADGFPSPTAVAKDTMHI------------ECGICYAFRYE-------GQVPDQICGHAKCQRPYHRLCLYEWLRSLPTTR------QSFHTLFGQCPYCSETITTTVP 393          
BLAST of NO16G00080 vs. NCBI_GenBank
Match: XP_013407858.1 (E3 ubiquitin-protein ligase FANCL [Lingula anatina])

HSP 1 Score: 144.1 bits (362), Expect = 1.100e-30
Identity = 93/341 (27.27%), Postives = 152/341 (44.57%), Query Frame = 0
Query:   96 PPSQYRQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRCRVALP-PIGKEGGGKGGEGTGLLEFRPPLSXXXXXXXXXXXXXXXXFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPRENLEAILGISFPTPPXXXXXXXXXXXXXXXXXXYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGACPFCSDPISLAVPA 436
            PPS Y+QLL E++ L W  +  +  S               L +  +D GGR+H + + +      S  P   P C V LP P       +    TG+L+F                            +QF+  L   QDFW+ +D+ D+ +W++  E E   R ++KRR+ L  ++S  + +D   P    + + +G +  I P + R    +G+W+       NLE +L + FP+P                   +  EC ICYAYRLE        E P   C+++RC + FH  CL +WL+ LP ++       + +T+ G CP+C+ PI++ +P+
Sbjct:  102 PPSYYKQLLTEIEELDWKNVSYVDTS------------LQQLHLRAMDQGGREHILKIHIS-----SEHPVERPICTVDLPIPFNISWSSQ----TGMLQF--------------------------LYKQFQNMLETLQDFWNQLDEIDSKTWIL--EPENPIRGASKRRIALGNNSSVQIQVDPKNPRLPPECKLLGADHVINPLNSR----IGEWNPEDSILNNLERVLNVQFPSP------------ANSKKEDFNMECGICYAYRLE-------MEIPDKACDDQRCGQPFHQTCLYEWLRALPSSR------QSFNTIFGECPYCNKPITVKMPS 364          
The following BLAST results are available for this feature:
BLAST of NO16G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22827.16.200e-6357.65zinc finger protein [Nannochloropsis gaditana][more]
CEO95787.11.300e-3329.31hypothetical protein PBRA_004500, partial [Plasmod... [more]
XP_002610558.13.900e-3328.74hypothetical protein BRAFLDRAFT_57071 [Branchiosto... [more]
OAQ25702.13.900e-3327.68hypothetical protein K457DRAFT_140876 [Mortierella... [more]
XP_005651697.11.300e-3130.32hypothetical protein COCSUDRAFT_64092 [Coccomyxa s... [more]
XP_009841914.12.100e-3128.32hypothetical protein H257_15489 [Aphanomyces astac... [more]
XP_019647647.13.700e-3127.68PREDICTED: E3 ubiquitin-protein ligase FANCL-like ... [more]
XP_009841915.14.800e-3128.99hypothetical protein, variant [Aphanomyces astaci]... [more]
KFH72826.11.100e-3027.91hypothetical protein MVEG_00051 [Mortierella verti... [more]
XP_013407858.11.100e-3027.27E3 ubiquitin-protein ligase FANCL [Lingula anatina... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR089ncniR089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR058ngnoR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00080.2NO16G00080.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G00080.1NO16G00080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612847gene_10934Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100491g1gene7623Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00080.2NO16G00080.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G00080.1NO16G00080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00080 ID=NO16G00080|Name=NO16G00080|organism=Nannochloropsis oceanica|type=gene|length=3099bp
AAGACACAGGCAGGGCGATGGCGGCGGCATGAAAGTCGGAGGGGGGAGTA
CAAGGATGGAAGCCCCGCCATCACCACTTATCCCAATGCCAGGAGCCTCG
CCACAGGAGGAGGAGGAAGAGATTTCCTTCTTTCTCGCCTCCCTTGCCAC
TGCAACCACCACCACAAGCTGCAGCAGCAACAGTAGGACTAAGAAGGTGA
CTCTTTCTTTGCTTCCAGCCTCACCGGATTTCATGGCGTTCCAGGGCTTC
GTGTCTCTAGGGgtaagtacgtctgaaaagctgggcaggatggtgagaac
acacaggccaggagcctagaaaaggacagactcggtcacactgaaccaac
gaggtaagtgtgaactgaccgcgaattctttccctatctgaacacatagC
CACATCAGTTGCCACTGGCCTTCTCCTGCGAGACTCCGGGAGGGCGTGTC
TTGATATCGTCCCTTCGAGGGGATGCTCGGCTGCGTGCGCTGTGGGAGCA
GGGCGGATGGTTGAGTCGCACACGgtaaggggaaacgaagcgtaacgatg
aaagaaatggcggcaaatgattatgaattaaagcggacgaagtacttgaa
tgcgcctactcatgagaagaggctctgagctgttacgagatcgaacagag
gggaggaagggaaggcatagtaagcaaagcaggatccctcacgccattcc
gtcaaaacactacaaacgcagCTTAGAGAGATGCGGCGATGTGGCCTCTT
TTTCCGCCGAGTTAGAAGACATGCTTTCCACCCCCCCTTCTTCTTTTCGC
CCTCCCGCCCTGCCTCGCGCACTCCCTGATGGCCGTCCGGATGGGAGGGA
GACAAAGAGGAGTAGTAGTAGGAGCTGCACGGTACCACCTTCTCAATACC
GACAGgtaagacggtaaaaagcgagtggagagacagaaacaaaaaacagg
gggcgaaagaaaagaagaagcaacataagcgtctcaattaagtgaaatat
acttatctactctccttcctccctccttccgttcctcctccttccctctc
tctctcatgtttctccatccccagCTGCTTCGCGAGCTGGATGCCTTGGG
CTGGGACTGCATCCACGATATCTCGCCCTCCCCCTCTTCCCGGGGGCCAG
GAGGGGGGGAGGAAGGGTGGATGACGCTTTCCATCTGTGTGTTGGACGCG
GGAGGGAGGAAGCATGAGATGATGGTAGATCTCCCTCCTCATCAATCCTT
CTCTTCCCCCCCTACCACTTTGCCTCGGTGTCGGGTGGCCTTGCCACCGA
TTGGGAAGGAAGGAGGAGGGAAGGGGGGGGAAGGCACAGGCTTGTTGGAG
gtaatggaggaagggagggagggagggagggagggaggaggacttggtgt
tgacatgcccctctgcatcatcctcacgcccctgcactattctcttcccc
tgtacattcacagTTCCGGCCACCACTCTCTTCTACTTCCGCCTCCTCGT
CCTCCTCGTCCTCCCCCTCGTCCTCTTTATTCCATCTCCAAGCGGCCAAG
CGGCAGTTTGAGGAGAGCCTGCGCGCCTGCCAGGACTTCTGGGATgtgag
ggagagggagggagcgagggtgggataagtgggaaaatggaaagggcttt
acttattgggcgctcgagccgtcacacaatcttttccctcgtgcacacat
acctattttcctccctcccatcctccctccctccctcccgtcctccctcc
ctccctccctccctgtccaagGTGATGGATGACTTCGACACCTATTCCTG
GGTCATGGGCGGCGAAACCGAGCGCTTCCGCCGCCATAGCACCAAGCGCC
GCCTCGTCCTCCACGCTCACGCTTCATGTGTCGTCACCATTGACGTCAGT
GCGCCTTACAAGgtgcgtcctccctcccccccctccctccccccctctat
cccatcctctagcttgctacattgcatccgccttccgcgttatgttcatt
cgcctgttcattctggctatccctcccctcctctgtccctctcccgttcc
ggctttcatggcttcactttcttccaatttacccggatctccctcctttt
tctcctccctcccgccctccccctccctctcttctcccatcctctagGCT
TGTGACATCCAATTTATCGGCCCCGAGGCCACCATTCGGCCCTGGAGCGA
GAGGATGTACACGCACGTCGGCGACTGgtgcgtttcctccctccctccct
ccttccctccctccgtcgttcccttcctctcccacaaaattatttccttc
cccctcttctctccgcccctgcctcccttcagGGACACGAGCAAGAAGCC
CCGGGAAAATCTAGAGGCGATTCTCGGCATCTCCTTCCCTACCCCTCCTG
CTGCTGCCACTGCTGCGAAGCGGGGGGGGGAGCAGGGAGGATGGCAGCAG
GAGTACGTCGAGGAGTGCTGCATCTGCTACGCTTATCGATTGGAGGATGA
GGAGGGAAAGGAGGGAGGAGgtaggcaggggatgagggcgggagtgagaa
agagggcggaggaggacttctcttttggctgctaaaggcggatgtatata
atatgtgtatataccgactttcctcctcccttcattccctccgtccctcc
ctccctccctcttccgttcccagAGACCCCCACGTTGCCGTGCGAGAACG
AGCGCTGCCGCCGCCTCTTCCACCCCATGTGCCTGCGGCAGTGGCTGCAA
ACCCTGCCTGACACCAAAGTCTTGGgtaaggaggggagggagatcgtaga
gggagggagggaaggagggaaggactgtaaaccaggggaaatgccgctaa
cagaagcaaatgaagggaaatgaaaccaacagaactcgtccgtctcccct
cctcctctccctcctccccttcctccccccagGCGGGCATATGGCAGCGT
CGCACACGCTGGTTGGCGCCTGTCCCTTCTGCAGTGACCCCATTTCTCTC
GCAGTCCCTGCGTCTTCCATGGCATAGGGCGCAGGAGATGGAGGGCGAGG
AGGAGGGCTTTAGGTCCAACATACCCTTCCCCCCTCCCTCCCTCCCTCC
back to top

protein sequence of NO16G00080.2

>NO16G00080.2-protein ID=NO16G00080.2-protein|Name=NO16G00080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MRLLMRRGSELLRDRTEGRKGRHSKQSRIPHAIPSKHYKRSLERCGDVAS
FSAELEDMLSTPPSSFRPPALPRALPDGRPDGRETKRSSSRSCTVPPSQY
RQLLRELDALGWDCIHDISPSPSSRGPGGGEEGWMTLSICVLDAGGRKHE
MMVDLPPHQSFSSPPTTLPRCRVALPPIGKEGGGKGGEGTGLLEFRPPLS
STSASSSSSSSPSSSLFHLQAAKRQFEESLRACQDFWDVMDDFDTYSWVM
GGETERFRRHSTKRRLVLHAHASCVVTIDVSAPYKACDIQFIGPEATIRP
WSERMYTHVGDWDTSKKPRENLEAILGISFPTPPAAATAAKRGGEQGGWQ
QEYVEECCICYAYRLEDEEGKEGGETPTLPCENERCRRLFHPMCLRQWLQ
TLPDTKVLGGHMAASHTLVGACPFCSDPISLAVPASSMA*
back to top

protein sequence of NO16G00080.1

>NO16G00080.1-protein ID=NO16G00080.1-protein|Name=NO16G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=519bp
MKVGGGSTRMEAPPSPLIPMPGASPQEEEEEISFFLASLATATTTTSCSS
NSRTKKVTLSLLPASPDFMAFQGFVSLGPHQLPLAFSCETPGGRVLISSL
RGDARLRALWEQGGWLSRTRLERCGDVASFSAELEDMLSTPPSSFRPPAL
PRALPDGRPDGRETKRSSSRSCTVPPSQYRQLLRELDALGWDCIHDISPS
PSSRGPGGGEEGWMTLSICVLDAGGRKHEMMVDLPPHQSFSSPPTTLPRC
RVALPPIGKEGGGKGGEGTGLLEFRPPLSSTSASSSSSSSPSSSLFHLQA
AKRQFEESLRACQDFWDVMDDFDTYSWVMGGETERFRRHSTKRRLVLHAH
ASCVVTIDVSAPYKACDIQFIGPEATIRPWSERMYTHVGDWDTSKKPREN
LEAILGISFPTPPAAATAAKRGGEQGGWQQEYVEECCICYAYRLEDEEGK
EGGETPTLPCENERCRRLFHPMCLRQWLQTLPDTKVLGGHMAASHTLVGA
CPFCSDPISLAVPASSMA*
back to top
Synonyms
Publications