NO15G03370, NO15G03370 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G03370 vs. NCBI_GenBank
Match: EWM22249.1 (harpin binding protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 350.1 bits (897), Expect = 5.600e-93 Identity = 184/246 (74.80%), Postives = 211/246 (85.77%), Query Frame = 0
Query: 9 VCCLTLSLASSFTLAFVP--STLTSTKSLRISPASTTQRLAASNNWLTNVLSRPSASKKTPAIIAAEAAALKQDLYAVAKNKDNGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDTASGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGLTNEGKPAKVSNIYVLRRV 253
VCCL L + + T AFVP L + + + P + LAA++NW T+VLS+ + SK A AA AALKQDLYAVAKNKDNGLKA+E+DKA+ILSL SELIK NPTKNIATS+KVDGTWRL+YTST+GGSAGKLGPFVG+VLQ+IDTA GDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFR+FG+P+VDKKPL+GQAGQWKL+Y+D++LRILTAA LTNEGKPAKVSNIYVLRRV
Sbjct: 9 VCCL-LGYSLTITTAFVPVRQPLHTHQPKDLQP-KAYKSLAANSNWFTSVLSKNNGSKGKSAADAAAVAALKQDLYAVAKNKDNGLKATESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALTNEGKPAKVSNIYVLRRV 252
BLAST of NO15G03370 vs. NCBI_GenBank
Match: XP_005853904.1 (hypothetical protein NGA_0463700 [Nannochloropsis gaditana CCMP526] >EKU22458.1 hypothetical protein NGA_0463700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 346.7 bits (888), Expect = 6.200e-92 Identity = 179/236 (75.85%), Postives = 205/236 (86.86%), Query Frame = 0
Query: 19 SFTLAFVP--STLTSTKSLRISPASTTQRLAASNNWLTNVLSRPSASKKTPAIIAAEAAALKQDLYAVAKNKDNGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDTASGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGLTNEGKPAKVSNIYVLRRV 253
+ T AFVP L + + + P + LAA++NW T+VLS+ + SK A AA AALKQDLYAVAKNKDNGLKA+E+DKA+ILSL SELIK NPTKNIATS+KVDGTWRL+YTST+GGSAGKLGPFVG+VLQ+IDTA GDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFR+FG+P+VDKKPL+GQAGQWKL+Y+D++LRILTAA LTNEGKPAKVSNIYVLRRV
Sbjct: 7 TITTAFVPVRQPLHTHQPKDLQP-KAYKSLAANSNWFTSVLSKNNGSKGKSAADAAAVAALKQDLYAVAKNKDNGLKATESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALTNEGKPAKVSNIYVLRRV 241
BLAST of NO15G03370 vs. NCBI_GenBank
Match: CEL91638.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 171.4 bits (433), Expect = 3.600e-39 Identity = 96/222 (43.24%), Postives = 142/222 (63.96%), Query Frame = 0
Query: 38 SPASTTQRLAASNNWLTNVLSRPSASKKTPAII------AAEAAALKQDLYAVAKNKDNGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDTASGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGLTNE-GKPAKVSNIYVLRRV 253
SPAS +S+ L+ LSR +A + +P ++ + +AA+LK+++ +AK KDNG+K + A++ +ILSL +L +P K A S +++G WRL+YT+T G SAGKLGPFVG+V Q ID S Y+N+V + G V+ L A+W+V G N W+V FQ+I FR+FG+P+ + N G W+++YLDD+ RIL A G + A N+YVLRRV
Sbjct: 31 SPASP----LSSSPTLSRPLSRRTARRLSPQMLTNIFKPSVDAASLKREIGRIAKGKDNGIKVTPAEREKILSLVKQLESSSPIKAAAQSKRLNGLWRLVYTTTPGSSAGKLGPFVGDVTQMIDMDSDVYINYVDI--GPVQAFLEASWDVLGPNRWRVKFQNIGFRVFGIPLAKNELKN--VGDWRMTYLDDDYRILWARGSRQQPDASAMPENVYVLRRV 244
BLAST of NO15G03370 vs. NCBI_GenBank
Match: CBJ27539.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 159.8 bits (403), Expect = 1.100e-35 Identity = 89/189 (47.09%), Postives = 114/189 (60.32%), Query Frame = 0
Query: 63 SKKTPAIIAAEAAALKQDLYAVAKNKDNGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDTASGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGLTNEGKPAKVSNIYVLRR 252
+K + E ALKQ + A NGLKA+ + I + L NPTK+I TS GTW LIYT+T G S GKLGPF+GEV Q++D A G YVN+VRL G + G L ATW+V ++WKV+F+ I F LFG +V K L+ QAG W LSYLDD++R+LTA L + N+YVL R
Sbjct: 48 AKHADEVAVEEVRALKQTILEEAAGTSNGLKATPQQRDAISKAINGLAAANPTKDITTSELATGTWDLIYTTTPGASGGKLGPFIGEVQQEVDIAEGLYVNYVRL--GPLTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLV-KNELD-QAGLWTLSYLDDDMRVLTARSLERD-----TGNVYVLAR 227
BLAST of NO15G03370 vs. NCBI_GenBank
Match: XP_005831175.1 (hypothetical protein GUITHDRAFT_109982 [Guillardia theta CCMP2712] >EKX44195.1 hypothetical protein GUITHDRAFT_109982 [Guillardia theta CCMP2712]) HSP 1 Score: 125.9 bits (315), Expect = 1.700e-25 Identity = 73/185 (39.46%), Postives = 98/185 (52.97%), Query Frame = 0
Query: 90 NGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDTASGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRLFGLPVVDKKPLNGQ-----------------------AGQWKLSYLDDELRILTAAGLTNEGKPAKVSNIYVLRR 252
NG+ ASE + +EL KLNPT+ ATS +DG WRL++++T G S+G LGPFVG+V Q I Y N + L G VE L A W+V G +W+V F DI F LFG+PV K+ + Q G W ++Y +D LR+L A G+ E A ++IYVL R
Sbjct: 16 NGVGASEDLILSVKEKATELAKLNPTQRQATSPMLDGKWRLVFSTTKGPSSGMLGPFVGDVFQDIVLEQEKYFNILEL--GFVEAVLSAHWDVMGQEKWRVFFDDIQFSLFGIPVFKKEFSSSQRDQVLEGLDTLGGTEKEARSSNNGGIWDMAYCNDTLRVLWAYGVQRE---ASKASIYVLER 195
BLAST of NO15G03370 vs. NCBI_GenBank
Match: XP_003064801.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH51135.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 92.4 bits (228), Expect = 2.100e-15 Identity = 55/170 (32.35%), Postives = 83/170 (48.82%), Query Frame = 0
Query: 90 NGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDT--------ASGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGLTNEGKPAKVSNIYVLRR 252
NG+ E +A I + +E+ LNPT++ A + W L+YT + G S+GK+GPFVG V Q D + Y N V ++ VA K KV F+D+T +FG V K G+AG W +++ + LR+L TN+G N++VL +
Sbjct: 75 NGVDRDETQRASIARIIAEIDALNPTRDTAAVDLAGTAWDLVYTDSQGNSSGKIGPFVGAVTQIFDADADPKKPGSGSTYANIVTFGPARLKLRAVAEGVAKKPTTLKVTFEDVTAEVFGRDVFAKPFPKGRAGTWTVTHASEALRVLR----TNQG------NVFVLAK 234
BLAST of NO15G03370 vs. NCBI_GenBank
Match: XP_002504384.1 (predicted protein [Micromonas commoda] >ACO65642.1 predicted protein [Micromonas commoda]) HSP 1 Score: 85.1 bits (209), Expect = 3.400e-13 Identity = 76/252 (30.16%), Postives = 117/252 (46.43%), Query Frame = 0
Query: 31 STKSLRISPASTTQRLAASNNWLTNVLSRPSASKKTPAIIAAEAAALKQDLYAVAKNKDNGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGT-----WRLIYTSTTGGSAGKLGPFVGEVLQQIDTAS------GDYVNFVRLFGGLVEGALVATWEV----------------KGAN----EWKVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGLTNEGKPAKVSNIYVLRR 252
S +S R+ +S R A L+ V + +++K I + +L D A NG+ ++ D++++ S+ + + L P+ N A ++ VDGT W LIYT + G S+GK+GPFVG+V Q + G Y N V LFGGL+ L A E GAN KV F D + + G V + G++G W + ++ DELR+L TN+G N++ L R
Sbjct: 14 SPRSSRLR-SSAAVRFAPRRCRLSPVRAERASNKNAAEEITSAKLSLLVDDLRAASGDANGVDLTDEDRSEVDSILAVIESLCPSDNRAKAH-VDGTLAGTSWDLIYTDSAGNSSGKIGPFVGKVRQVFKPSDDPNGGPGTYTNVVELFGGLLAIKLDAVAEAVTGRGTAGVGAPDASSDGANASSDALKVTFVDTSVWVLGAEVFRRPFPEGRSGTWVMKHVSDELRVLR----TNQG------NVFALGR 253
BLAST of NO15G03370 vs. NCBI_GenBank
Match: XP_009042368.1 (hypothetical protein AURANDRAFT_68434, partial [Aureococcus anophagefferens] >EGB02934.1 hypothetical protein AURANDRAFT_68434, partial [Aureococcus anophagefferens]) HSP 1 Score: 82.0 bits (201), Expect = 2.900e-12 Identity = 64/196 (32.65%), Postives = 100/196 (51.02%), Query Frame = 0
Query: 42 TTQRLAASNNWLTNVLSRPSASKKTPAIIAAEA-AALKQDLYAVAKNKDNGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDTASGDYVNFVRLFGGLVEGALVATWEVKGANEW--KVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGL 235
TT AS + LS + + E+ AALK+ L A NG+ ASE +L++ + +L +++ ++G L+++++TG S+GKLGPFVG V Q +VN V L G ++ AL A E + W +V F+ + LFG+ V KP++G G W + Y+DD+LRI+ A L
Sbjct: 3 TTALFVASLAACASALSTTKNQRAPSLALKGESTAALKEQLRRTAAPTQNGVGASE---RTVLTVEAIAAELESRRDLDAFPALEGAHELVFSTSTGASSGKLGPFVGHVTQTF-LDEKTFVNAVEL--GPLKVALTARREPLDMSGWTYRVTFESMGLSLFGVE-VGSKPISG-GGTWNIRYVDDDLRIMDAPSL 190
BLAST of NO15G03370 vs. NCBI_GenBank
Match: XP_003055229.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60481.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 80.5 bits (197), Expect = 8.300e-12 Identity = 57/191 (29.84%), Postives = 87/191 (45.55%), Query Frame = 0
Query: 61 SASKKTPAIIAAEAAAL---KQDLYAVAKNKDNGLKASEADKAQILSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPFVGEVLQQIDTASGDYVNFVRL-----FGGLVEGALVATWEVKGANEWKVIFQDITFRLF-GLPVVDKKPLNGQAGQWKLSYLDDELRILTAA----GLTNEG 239
+AS A+ AA+A ++ K++L+ ++ + GL AS+ A I + L LNPT N A S VDG W +++++ S G LGPF G Q+I +G YVN + + G + W V F + LF G K W+ +++D E R++ AA LT EG
Sbjct: 60 AASSTRWAVDAADARSISTAKEELFESMRDANRGLDASDDALAAIEAKIRALEALNPTSNPANSALVDGRWEVVFSTAPPPSNGSLGPFKGTAFQEISLENGSYVNVLSIPPNDWLGARLVATFAPVMNDSRGELWTVTFDAVAVTLFDGAFSPFAKTFKDTTRVWRTTFIDAETRVVRAARTMEALTREG 250
BLAST of NO15G03370 vs. NCBI_GenBank
Match: EWM24627.1 (Plastid lipid-associated protein/fibrillin conserved domain protein [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11 Identity = 54/178 (30.34%), Postives = 90/178 (50.56%), Query Frame = 0
Query: 73 EAAALKQDLYAVAKN-KDNGLKASEADKAQI--LSLTSELIKLNPTKNIATSNKVDGTWRLIYTSTTGGSAGKLGPF---VGEVLQQIDTASGDYVNFVRL----FGGLVEGALVATWEVKGANEWKVIFQDITFRLFGLPVVDKKPLNGQAGQWKLSYLDDELRILTAAGLTNEGKP 241
+A + L ++ K +G+ S+A K I +++ E +K PT+ A S+ V G W L+YT G S+G++GPF G V Q+++ AS Y N +R+ +E L A+++V +W+V F+D+ L G VV ++ +G W +YLD R+ E +P
Sbjct: 72 QAQGWRDSLVSIGKQLSTSGILPSKAQKMTIRSIAVALETVKPMPTRAPALSSMVQGRWSLLYTDAPGISSGRIGPFGVIKGRVSQEVELASKAYTNILRVAKPGHEPWLEARLTASFDVLNDTDWEVTFEDVVGLLRGKQVV-RQVFSGVQRIWTHTYLDPTGRVRVMRARRPERQP 248 The following BLAST results are available for this feature:
BLAST of NO15G03370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G03370 ID=NO15G03370|Name=NO15G03370|organism=Nannochloropsis oceanica|type=gene|length=1599bpback to top protein sequence of NO15G03370.1 >NO15G03370.1-protein ID=NO15G03370.1-protein|Name=NO15G03370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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