NO15G03300, NO15G03300 (gene) Nannochloropsis oceanica

Overview
NameNO15G03300
Unique NameNO15G03300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1597
Alignment locationchr15:963862..965458 +

Link to JBrowse

Properties
Property NameValue
Description6-pyruvoyl tetrahydropterin synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:963862..965458 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0071156-PTP_synth/QueD
Homology
BLAST of NO15G03300 vs. NCBI_GenBank
Match: EWM22261.1 (6-pyruvoyl tetrahydropterin synthase [Nannochloropsis gaditana])

HSP 1 Score: 295.4 bits (755), Expect = 1.800e-76
Identity = 148/196 (75.51%), Postives = 164/196 (83.67%), Query Frame = 0
Query:   86 MKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGRGHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSYTRKLTSPPPLCFEEDKERGR---VSRPRPCIHAVE-EDGKDIDG 278
            MK+DFKFHCAHFVAFKGYRERLHGHNYTVGVRMRG  RGHDGYLIDFGDIK VTR+LCKELNERF+CPTRSDVIQI+ +    SL CEDGA FV PT DCAMLPVVHSTAEELAQY WHRLTT+FS++ LL+RGIHTLQI+VAEAPRQEG YTR+LTS PPL F ++   GR   V +P+PCI   E  DG+  DG
Sbjct:    1 MKEDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGTRRGHDGYLIDFGDIKLVTRALCKELNERFLCPTRSDVIQIDVEGPRISLACEDGALFVLPTADCAMLPVVHSTAEELAQYFWHRLTTSFSVDRLLSRGIHTLQIMVAEAPRQEGCYTRRLTS-PPLSFLDEGLGGRAAEVLKPKPCIGRNEVGDGQGGDG 195          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: XP_009034429.1 (hypothetical protein AURANDRAFT_22298 [Aureococcus anophagefferens] >EGB10850.1 hypothetical protein AURANDRAFT_22298 [Aureococcus anophagefferens])

HSP 1 Score: 194.1 bits (492), Expect = 5.800e-46
Identity = 92/166 (55.42%), Postives = 115/166 (69.28%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGRGHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSYTRKLTSPPP 247
            +EV V  + FKF+ +HFVAF+G+RERLHGHNYTVGVR+ G     DGY++DFGD+K+  R +C+ LNERF+CP RSDV+ I     +  L  EDGA F  P GDCAMLP+VHSTAEELA  +WH+    F ++ L  RGI  ++I VAEAP QE  Y RKL    P
Sbjct:   14 FEVQVRSERFKFNASHFVAFRGFRERLHGHNYTVGVRVFGPLSPDDGYVLDFGDVKKTVRGVCETLNERFLCPCRSDVLDIRDAGPNVELTAEDGAFFSIPLGDCAMLPIVHSTAEELAAMIWHKTIEAFGVDILKKRGITAIEIAVAEAPMQEARYRRKLAGFAP 179          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: GAX21256.1 (hypothetical protein FisN_1Lh085 [Fistulifera solaris])

HSP 1 Score: 191.0 bits (484), Expect = 4.900e-45
Identity = 89/161 (55.28%), Postives = 121/161 (75.16%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGR-GHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDE---TSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSY 238
            +EV+V K  FKF+ AHFVAF+GYRERLHGHNY VGVR+ G    G DGY+IDFG+IK V +++CK+LNE F+CP  SDV++IESD+   T+  + C+DG+ F FP  DCAMLP+VH+T EE+A YLW  +    + + L+ RGIHT+++ VAEAP Q+ ++
Sbjct:   10 FEVYVSKDTFKFNAAHFVAFQGYRERLHGHNYQVGVRLLGRRTLGADGYVIDFGNIKAVCKTVCKKLNEHFLCPMYSDVLKIESDDNTNTNIRITCQDGSSFSFPPQDCAMLPIVHATTEEIAIYLWSEILKGLNSQYLVQRGIHTMEVTVAEAPGQQATF 170          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: OEU13794.1 (tetrahydrobiopterin biosynthesis enzymes-like protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 190.7 bits (483), Expect = 6.400e-45
Identity = 91/173 (52.60%), Postives = 119/173 (68.79%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGR-GHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQI------------------ESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQE 235
            +EV+V K DFKF+ AHFVAF+G+RERLHGHNYTVGVR+ G+ +  HDGY++DFGD+K V + +CK+LNERF+CP +SDVI I                  +    S  L CEDGA+FV P  DCAMLP+VH+T EELA Y+W  +      + L  RGIHT+++++AEAP QE
Sbjct:    4 FEVYVSKADFKFNAAHFVAFRGFRERLHGHNYTVGVRLLGSRKISHDGYVMDFGDVKAVVKKVCKKLNERFLCPIKSDVIDIQIVQQDDVVVGNNSNKSNDCSSKSVILTCEDGAKFVMPRDDCAMLPIVHATVEELAIYVWSEILIGLDSKILRQRGIHTMEVVMAEAPGQE 176          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: GAX12160.1 (hypothetical protein FisN_1Hh085 [Fistulifera solaris])

HSP 1 Score: 190.7 bits (483), Expect = 6.400e-45
Identity = 89/161 (55.28%), Postives = 120/161 (74.53%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGR-GHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDE---TSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSY 238
            +EV+V K  FKF+ AHFVAF+GYRERLHGHNY VGVR+ G    G DGY+ID+G+IK V +++CKELNE F+CP  SDV++IESD+   T+  + C+DG+ F FP  DCAMLP+VH+T EE+A YLW  +    + + L  RGIHT+++ VAEAP Q+ ++
Sbjct:   12 FEVYVSKDTFKFNAAHFVAFQGYRERLHGHNYQVGVRLLGRRTLGADGYVIDYGNIKAVCKTVCKELNEHFLCPMYSDVLKIESDDNTSTNIRITCQDGSSFSFPKQDCAMLPIVHATTEEIAIYLWSEILKGLNSQYLAQRGIHTMEVTVAEAPGQQATF 172          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: OQR89459.1 (hypothetical protein ACHHYP_06278 [Achlya hypogyna])

HSP 1 Score: 184.9 bits (468), Expect = 3.500e-43
Identity = 89/162 (54.94%), Postives = 113/162 (69.75%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGRGHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSYTRKLT 243
            Y+VFV K   KF+ AHF+A+KG+RERLHGHNY + V + G   GHDGY++DFG IK   R +CKELNE FI P +SDV++I  DET+  L  EDG +F FP  DC++LP+VHS+AEELA Y+  RL   F+L  L AR +  L+I +AEA  Q  SY R LT
Sbjct:    9 YKVFVSKDYMKFNAAHFIAYKGFRERLHGHNYRLSVTIYGHSVGHDGYVLDFGQIKASARKICKELNEHFIVPMKSDVLEIVVDETNVQLTTEDGQKFSFPKTDCSILPIVHSSAEELAIYISGRLIEEFTLTALQARNVFKLEISIAEAENQLASYERHLT 170          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: XP_002177809.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50623.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 180.6 bits (457), Expect = 6.600e-42
Identity = 85/157 (54.14%), Postives = 111/157 (70.70%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGR-GHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGS 237
            +EV+V K  FKF+ AHFVAF+GYRERLHGHNY +GVR+ G  + G DGYLIDFG +K V + +CK +NE F+CP  SDV++I ++  S  + C DG  FVFP  DC MLP+ H+TAEELA YL+  +    + + L  RGIHT++I VAEA  QE +
Sbjct:    8 FEVYVSKDTFKFNAAHFVAFQGYRERLHGHNYRIGVRLLGRRQIGADGYLIDFGCVKDVCKKVCKRINEHFLCPVHSDVLKITTENESVRIECADGTYFVFPAADCVMLPIFHATAEELAIYLYAEILNGLNADYLQKRGIHTMEIAVAEAIGQEAT 164          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: XP_009844362.1 (hypothetical protein H257_17325 [Aphanomyces astaci] >ETV66173.1 hypothetical protein H257_17325 [Aphanomyces astaci])

HSP 1 Score: 179.5 bits (454), Expect = 1.500e-41
Identity = 85/161 (52.80%), Postives = 112/161 (69.57%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGRGHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSYTRKL 242
            Y VFV K   KF+ AHF+AFKG+RERLHGHNY + V + G   GHDGYL+DFGDIK+V R +C+ELNE F+ P +SDV++I+ +  +  L+ EDG  F FP GDCA+LP+VHS+AEELA+YL   L   F++  + AR    +Q+ +AEA  Q  S  R L
Sbjct:    7 YRVFVSKDYMKFNAAHFIAFKGFRERLHGHNYRMSVTITGDRIGHDGYLVDFGDIKKVAREVCRELNEHFLVPLKSDVLKIDVNAETVQLVTEDGKSFSFPRGDCALLPIVHSSAEELARYLMDVLLERFTMAQMKARHATKIQVSIAEAENQLASVDRTL 167          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: GBG24230.1 (6-carboxy-5,6,7,8-tetrahydropterin synthase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 177.6 bits (449), Expect = 5.600e-41
Identity = 84/159 (52.83%), Postives = 113/159 (71.07%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGRGHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIE--SDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSY 238
            +EV V K+ FKF+CAHF+AFKG+RERLHGHNY VGV++ G  RG DGY++DFG++K     +CK  NERFICP +SDV+ I+  S+E + ++ CEDG  F FP  DC  LP+VHS+AEELA++    L ++   E L +RGI  +++ VAEAP Q   Y
Sbjct:    4 FEVHVAKEKFKFNCAHFIAFKGFRERLHGHNYQVGVKLSG-DRGPDGYVLDFGEVKEQVMRICKLWNERFICPVKSDVLDIDLTSNEDNITINCEDGTHFSFPRDDCLFLPIVHSSAEELAEHFAVLLVSSVGAERLRSRGIRDIEVSVAEAPHQAAIY 161          
BLAST of NO15G03300 vs. NCBI_GenBank
Match: XP_008864402.1 (hypothetical protein H310_02611 [Aphanomyces invadans] >ETW06327.1 hypothetical protein H310_02611 [Aphanomyces invadans])

HSP 1 Score: 175.6 bits (444), Expect = 2.100e-40
Identity = 82/161 (50.93%), Postives = 113/161 (70.19%), Query Frame = 0
Query:   81 YEVFVMKQDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGAGRGHDGYLIDFGDIKRVTRSLCKELNERFICPTRSDVIQIESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQYLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSYTRKL 242
            Y VFV K   KF+ AHF+AFKG+RERLHGHNY + V + G   GHDGYL+DFGDIK++ R +C+ELNE FI P++SDV++I+  + + +L+ ED   F FP  DC++LP+VHS+AEELA+YL   L   F++  + AR    +++ +AEA  Q  S TR L
Sbjct:    7 YRVFVSKDYMKFNAAHFIAFKGFRERLHGHNYRMSVTITGDRIGHDGYLMDFGDIKKIAREVCRELNEHFIVPSKSDVLKIDVTDETVTLVTEDNKTFSFPREDCSLLPIVHSSAEELARYLMDVLLERFTMTQMKARHATKIEVSIAEAENQLASVTRSL 167          
The following BLAST results are available for this feature:
BLAST of NO15G03300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22261.11.800e-7675.516-pyruvoyl tetrahydropterin synthase [Nannochlorop... [more]
XP_009034429.15.800e-4655.42hypothetical protein AURANDRAFT_22298 [Aureococcus... [more]
GAX21256.14.900e-4555.28hypothetical protein FisN_1Lh085 [Fistulifera sola... [more]
OEU13794.16.400e-4552.60tetrahydrobiopterin biosynthesis enzymes-like prot... [more]
GAX12160.16.400e-4555.28hypothetical protein FisN_1Hh085 [Fistulifera sola... [more]
OQR89459.13.500e-4354.94hypothetical protein ACHHYP_06278 [Achlya hypogyna... [more]
XP_002177809.16.600e-4254.14predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_009844362.11.500e-4152.80hypothetical protein H257_17325 [Aphanomyces astac... [more]
GBG24230.15.600e-4152.836-carboxy-5,6,7,8-tetrahydropterin synthase [Auran... [more]
XP_008864402.12.100e-4050.93hypothetical protein H310_02611 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G03300.1NO15G03300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588285gene_4894Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100376g1gene8178Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G03300.1NO15G03300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G03300 ID=NO15G03300|Name=NO15G03300|organism=Nannochloropsis oceanica|type=gene|length=1597bp
GGATTACTTGTCTTGTCTGCCTGTGGACGTAGGAATTGAATCAGAATATT
AGAGTGAATCGACCAAAATAACACGACAAGGGAGGATGGACCAGAACACT
GTGAAATCTAAAGCCAAGGAGCGAAGCGATGAGGGCAGCGGGGAGGTCAA
AGTCGGCCACGCATGCACATTTAGTGCCTTTTACGCATGCCTTCACACAC
AACCACATATCATGCAGGCCATAGAAAGCGCATCTACGGTAGCCATGACA
TCATCCTCGTCATCCACGCCTGCCGCGAATAGCAGCGCAGCCAGTCCAGC
AAACGAGGAGGAGTCGCAAGAGGAATACGAGgtaacaatcacactcgcct
cccctacctgaccctttgatccaaagccatccttactgtgcctgctgcat
tgacacttcagtgacgccttcgaagttctccatcgtaactggttcccctc
tcctccttgtctgtgttttggtcctgtctctcattccctccctcctctct
tcccctccctcccctgctcaccacactcccacccaaagGTCTTCGTCATG
AAGCAAGACTTCAAGTTCCACTGTGCGCATTTCGTAGCATTCAAGGGTTA
TAGAGAAAGATTGCACGGCCATAATTACACCGTGGGCGTGCGGATGCGCG
GGGCTGGGCGAGGGCACGATGGgtaaggtggttgtggggatggggtggcg
agcagacaagagtaaggagagtaaggagatacgcgcaccaacatgccaag
tggcggtaaggactacctgtttgtagaaacgcctcaattgcttttcgtcc
tctctcgcgctcccctcccccggactcaacctccttccctccctacctcc
ctcccttccttcctcctttccttcccccacccaaagCTATCTCATTGACT
TCGGTGACATCAAGCGCGTAACCCGCTCCCTCTGTAAGGAGCTCAACGAA
CGCTTTATCTGCCCGACCCGGAGCGACGTGATTCAAATCGAGAGTGACGA
GACCTCGACTTCACTTCTGTGTGAGGACGGGGCTAGGTTTGTCTTTCCAA
CGGGCGATTGCGCCATGCTCCCGGTAGTGCACAGgtgagcgaagaggaca
aagggaggagtacgtcctggcaccaccctgaaattagaaaaatttaaatt
aaatggaatatggaggatataacattttcacatcggctatccatcgatat
gccctctcattcccgcggctacccccacccacagCACCGCCGAGGAGCTC
GCGCAGTACCTGTGGCATCGCCTGACCACCACCTTTAGCTTGGAGGGGTT
GCTGGCCCGGGGCATCCATACTTTGCAGATCATCGTCGCCGAGGCCCCTC
GGCAAGAAGGCTCCTACACGCGGAAGCTGACCTCGCCCCCACCGTTGTGC
TTCGAGGAGGATAAGGAGAGAGGGCGGGTGTCGAGACCGAGGCCGTGTAT
ACACGCAGTCGAAGAGGATGGAAAGGATATAGATGGGGAGGACTTGGACA
TGTAGGTAAGAAAATAAAGAGACGAAGAGAAAAATACCTGTCTAGGGATG
ACTAAAATGATTACGACAAAATGATGTGAAATGAATAAATATACTTA
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protein sequence of NO15G03300.1

>NO15G03300.1-protein ID=NO15G03300.1-protein|Name=NO15G03300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MDQNTVKSKAKERSDEGSGEVKVGHACTFSAFYACLHTQPHIMQAIESAS
TVAMTSSSSSTPAANSSAASPANEEESQEEYEVFVMKQDFKFHCAHFVAF
KGYRERLHGHNYTVGVRMRGAGRGHDGYLIDFGDIKRVTRSLCKELNERF
ICPTRSDVIQIESDETSTSLLCEDGARFVFPTGDCAMLPVVHSTAEELAQ
YLWHRLTTTFSLEGLLARGIHTLQIIVAEAPRQEGSYTRKLTSPPPLCFE
EDKERGRVSRPRPCIHAVEEDGKDIDGEDLDM*
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Synonyms
Publications