NO15G02940, NO15G02940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02940 vs. NCBI_GenBank
Match: EWM22308.1 (protein of unknown function DUF1990 [Nannochloropsis gaditana]) HSP 1 Score: 563.1 bits (1450), Expect = 7.100e-157 Identity = 267/387 (68.99%), Postives = 315/387 (81.40%), Query Frame = 0 Query: 28 LSMITVAALLLASLVPMARAGAITYANNGEQTMKAHFSDFYEIMQPEDYIIYQDRLQEIIDWGLRNTLTHDPRKGLWQGIAEDWPLVPSPVRRGIKTRHKNFGPVTDKRQQLLDEKANRFRERIERGLAKKGFLVAYFMYNHDGNAMGGAEGRRMSLMSMASRLPRIRVGWPHSYKQVQHYLIALRQRKFNHMYVGVTQEFLPYGGRVVEDWLRHKGYEGFRVKTRRVLLGKGPEIYATAKKNMVNWSWNEKVRWSQFLEGEHGINVVSRIRAYGLFWTMNPLRKVLCHEKAWGKQGGAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQSAVREAVALREKEAEEAK 415 L +T ALL A L GA+TYAN+GE ++AHFSDFYEIM PEDY IYQDRL EIIDWGLRNT D RKG QG+AEDW VP+P+R+G+K RHK+FGP+ ++R+ LDE+ + R+RI+RG+AKKG+LVAY+M+NHD NAMG AE R SL LPR+R+GWPHS +QVQHYL+ALRQRKFNHMYVGVTQEF PYG R VEDWLR KGYEGF+VKT+RVLLGKGPE YA AK +VNWSW E+V+W +F EGEHGINVVS+IR YGL WTMNPLRKVLCHEK WGK+GGAVAAVAVSTL+GHLLEGEERFCV +EGG+QGDVWFD+LSFSKG FPLG+LLMP++RPLQ+RF D+G AMQ V E+V + A ++K Sbjct: 6 LHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQP--LPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVAVSTLRGHLLEGEERFCVWFEGGRQGDVWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLVGESVPEKSVVANKSK 390
BLAST of NO15G02940 vs. NCBI_GenBank
Match: XP_005854250.1 (hypothetical protein NGA_0192000, partial [Nannochloropsis gaditana CCMP526] >EKU22110.1 hypothetical protein NGA_0192000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 446.8 bits (1148), Expect = 7.400e-122 Identity = 211/304 (69.41%), Postives = 246/304 (80.92%), Query Frame = 0 Query: 28 LSMITVAALLLASLVPMARAGAITYANNGEQTMKAHFSDFYEIMQPEDYIIYQDRLQEIIDWGLRNTLTHDPRKGLWQGIAEDWPLVPSPVRRGIKTRHKNFGPVTDKRQQLLDEKANRFRERIERGLAKKGFLVAYFMYNHDGNAMGGAEGRRMSLMSMASRLPRIRVGWPHSYKQVQHYLIALRQRKFNHMYVGVTQEFLPYGGRVVEDWLRHKGYEGFRVKTRRVLLGKGPEIYATAKKNMVNWSWNEKVRWSQFLEGEHGINVVSRIRAYGLFWTMNPLRKVLCHEKAWGKQGGAVAAVA 332 L +T ALL A L GA+TYAN+GE ++AHFSDFYEIM PEDY IYQDRL EIIDWGLRNT D RKG QG+AEDW VP+P+R+G+K RHK+FGP+ ++R+ LDE+ + R+RI+RG+AKKG+LVAY+M+NHD NAMG AE R SL LPR+R+GWPHS +QVQHYL+ALRQRKFNHMYVGVTQEF PYG R VEDWLR KGYEGF+VKT+RVLLGKGPE YA AK +VNWSW E+V+W +F EGEHGINVVS+IR YGL WTMNPLRKVLCHEK WGK+GGAVAAVA Sbjct: 6 LHALTTVALLFALLARGTEGGAVTYANHGEPALQAHFSDFYEIMTPEDYRIYQDRLHEIIDWGLRNTRQQDLRKGFLQGVAEDWRFVPTPLRQGLKRRHKDFGPLQERRRVTLDERNRQMRDRIDRGVAKKGYLVAYYMFNHDCNAMGPAEDREHSLFFQP--LPRLRMGWPHSSRQVQHYLVALRQRKFNHMYVGVTQEFAPYGEREVEDWLRLKGYEGFKVKTQRVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIRTYGLLWTMNPLRKVLCHEKPWGKRGGAVAAVA 307
BLAST of NO15G02940 vs. NCBI_GenBank
Match: CEM35385.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 87.4 bits (215), Expect = 1.100e-13 Identity = 74/252 (29.37%), Postives = 113/252 (44.84%), Query Frame = 0 Query: 188 ASRLPRIRVGWPHSYKQVQHYLIALRQRKFNHMYVGVTQEFLPYGGRVVEDWLRHKGYEGFRVKTRRVLLGKGPEIYATAKKNMVNWSW-NEKVRWSQFLEGEHGINVVSRIRAYGLFWTMNP--LRKVLCHEKAWGKQGGAV--AAVAVSTLQGHLLEGEERFCVCW-----EGG------------------KQGD--------VWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQSAVREAV 404 ++ +P ++VG HS + L ++ R NH +V T P ++ V +R L+G G + Y A + +++W NE + W + G V + +AYG+ +NP + L ++A G V AV ST++GHLL GEERF V W +GG +GD VWF++ S+S+ LG+L +RPLQ RF ADL M + V +AV Sbjct: 27 SASIPMLKVGQRHSDDAIFDALGTIKGRPPNHPFVRGTLLRYPTSSMAPSSYM---------VNHKRFLIGHGEKAYHFASRALLSWQLINESLEWIRI--DRRGEAVTTCAKAYGVS-AINPCLYQYELIDQRAARPSGREVVYTAVGYSTVKGHLLAGEERFTVAWNQTPRKGGPVSRIFGLRKQRPANDSDSEGDGIESEKDGVWFEVYSYSRPSGVLGRLAAVAVRPLQRRFAADLAAKMPAYVAKAV 266
BLAST of NO15G02940 vs. NCBI_GenBank
Match: XP_005770095.1 (hypothetical protein EMIHUDRAFT_243855 [Emiliania huxleyi CCMP1516] >XP_005789789.1 hypothetical protein EMIHUDRAFT_225501 [Emiliania huxleyi CCMP1516] >EOD17666.1 hypothetical protein EMIHUDRAFT_243855 [Emiliania huxleyi CCMP1516] >EOD37360.1 hypothetical protein EMIHUDRAFT_225501 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 84.7 bits (208), Expect = 7.400e-13 Identity = 56/155 (36.13%), Postives = 77/155 (49.68%), Query Frame = 0 Query: 249 RVKTRRVLLGKGPEIYATAKKNMVNWSWNEKVRWSQFL-EGEHGINVVSRIR----AYGLFWTMNPLRKVLCHEKAWGKQGGAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQSA 399 RV RV LG G + A++ +++W +E WS L E G ++V+ L W NP R V + G +V STL GHLLEGEE+ V W + +V F+++S S+G PLGKLL P + Q RFF + MQ A Sbjct: 60 RVIAMRVPLGHGRACWRRARRRLLSWEMHEGSTWSAVLVEDPPGRSLVTLAALPSPRLPLLWVSNPCRAVR------RRVGRRRCSVGYSTLSGHLLEGEEKMDVVW-SRETDEVAFEVVSHSRGAGPLGKLLFPALSSTQRRFFREQCRCMQRA 207
BLAST of NO15G02940 vs. NCBI_GenBank
Match: WP_052554427.1 (DUF1990 domain-containing protein [Gemmata sp. SH-PL17] >AMV26568.1 hypothetical protein VT84_19365 [Gemmata sp. SH-PL17]) HSP 1 Score: 82.8 bits (203), Expect = 2.800e-12 Identity = 62/201 (30.85%), Postives = 85/201 (42.29%), Query Frame = 0 Query: 205 VQHYLIALRQRKFNHMYVGVTQEFLPYGGRVVEDWLRHKGYEGFRVKTRRVLLGKGPEIYATAKKNMVNW-----SWNEKVRWSQFLEGEHGINVVSRIRAYGLFWTMNPLRKVLCHEKAWGKQGGAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQSAVR 401 +Q +L A Q +F++ VG T P GF V R LG+G ++ AK + W W E ++ + VV+R+ FW +N R V + A A TL GH GEERF V W+ + VW+D+L+FS+ PL +L PL R Q RF D MQ A R Sbjct: 12 IQRFLAAQAQLEFSYAAVGTTATTPP---------------AGFVVDHTRAKLGEGERVFLAAKAALTQWEHFRLGWVEAGPSDTVIQTGSCVAVVARVMG---FWWLNACRIVYVVNET---DAVARFGFAYGTLPGHAELGEERFMVEWDRARNA-VWYDILAFSRPNHPLARLGYPLTRKTQRRFAQDSVRVMQRATR 190
BLAST of NO15G02940 vs. NCBI_GenBank
Match: XP_020200111.1 (UPF0548 protein At2g17695 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 81.3 bits (199), Expect = 8.100e-12 Identity = 64/191 (33.51%), Postives = 86/191 (45.03%), Query Frame = 0 Query: 223 GVTQEFLPYGGRVVEDWLRHKGYEGFRVKTRRVLLGKGPEIYATAKKNMVNWSWNEKVRWSQFLEGEHGINVVSRIRAYGLF-----WTMNPLRKVLCHEKAW--GKQ----GGAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQSAVREA 403 G T P ED R GF V RVL+G G + + AK +++W + + W+ E E G V R + W M PL+ + + GK+ GG V A TLQGHLL GEERF V E + VW++++SFSK PL L P +R Q F + G A+ V A Sbjct: 36 GATHPKSPAALTTSEDTDRALADRGFSVNRSRVLVGSGADAFGHAKSALLSWK-HLALGWA---EAEPGTPVKIGARFCICYKEVVPWVMFPLQIAYVTDDNYDGGKRGKGGGGGVFAFGSGTLQGHLLAGEERFSV--EVDAEERVWYEVVSFSKPAHPLSALCYPYVRLRQRHFARESGKAVLRHVAAA 220
BLAST of NO15G02940 vs. NCBI_GenBank
Match: XP_015954438.1 (UPF0548 protein At2g17695 isoform X4 [Arachis duranensis]) HSP 1 Score: 80.1 bits (196), Expect = 1.800e-11 Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 0 Query: 246 EGFRVKTRRVLLGKGPEIYATAKKNMVNWS-----WNEKVRWSQFLEGEHGINVVSRIRAYGLFWTMNPLRKVLCHEKAWGKQGGAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQSAV 400 +GF + +RVLLG G E + +K + +WS W + EGE V + L W M PL+ V +E ++G A TL GHLL GEERF V E ++ +VW+++LSFSK L L +P ++ Q+ F + MQ+ V Sbjct: 50 DGFLLNNKRVLLGSGVETFEKSKAALKSWSHLGLDWAFVDPKTTIKEGEKFCVCVKEL----LPWVMMPLQVVYVNESR-KRKGVASFGFGSGTLHGHLLAGEERFSV--EIDEKNEVWYEVLSFSKPAHALSVLALPYVKLRQNYFAHESAKLMQNHV 201
BLAST of NO15G02940 vs. NCBI_GenBank
Match: XP_016187765.1 (UPF0548 protein At2g17695-like isoform X6 [Arachis ipaensis]) HSP 1 Score: 79.7 bits (195), Expect = 2.400e-11 Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 0 Query: 246 EGFRVKTRRVLLGKGPEIYATAKKNMVNWS-----WNEKVRWSQFLEGEHGINVVSRIRAYGLFWTMNPLRKVLCHEKAWGKQGGAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQSAV 400 +GF + +RVLLG G E + +K + +WS W + EGE V + L W M PL+ V +E ++G A TL GHLL GEERF V E ++ +VW+++LSFSK L L +P ++ Q+ F + MQ+ V Sbjct: 50 DGFLLNNKRVLLGSGVETFEKSKAALKSWSHLGLDWAFVDPKTAIKEGEKFCVCVKEL----LPWLMMPLQVVYVNESR-KRKGVASFGFGSGTLHGHLLAGEERFSV--EIDEKNEVWYEVLSFSKPAHALSVLALPYVKLRQNYFAHESAKLMQNHV 201
BLAST of NO15G02940 vs. NCBI_GenBank
Match: BAJ85926.1 (predicted protein, partial [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 79.3 bits (194), Expect = 3.100e-11 Identity = 59/170 (34.71%), Postives = 80/170 (47.06%), Query Frame = 0 Query: 237 EDWLRHKGYEGFRVKTRRVLLGKGPEIYATAKKNMVNWSWNEKVRWSQFLEGEHGINVVSRIRAYGLF-----WTMNPLRKVL-----CHEKAWGKQG-GAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAM 396 ED + GF V RVL+G G + + AK +++W + + W+ E E G V R + W M PL+ C+ GK G G V A TLQGHLL GEERF V E + VW++++SFSK PL L P +R Q F + G A+ Sbjct: 78 EDTDKALANRGFSVNRSRVLVGSGADAFRHAKSALLSWK-HLALGWA---EAEPGTPVKPGARFCICYKEVVPWVMFPLQIAYVTDDDCNGGKRGKGGDGGVFAFGSGTLQGHLLAGEERFSV--EVDAEERVWYEVVSFSKPAHPLSALCYPYVRLRQRHFARESGKAV 241
BLAST of NO15G02940 vs. NCBI_GenBank
Match: XP_022141808.1 (UPF0548 protein At2g17695 [Momordica charantia] >XP_022141809.1 UPF0548 protein At2g17695 [Momordica charantia] >XP_022141810.1 UPF0548 protein At2g17695 [Momordica charantia] >XP_022141811.1 UPF0548 protein At2g17695 [Momordica charantia] >XP_022141813.1 UPF0548 protein At2g17695 [Momordica charantia] >XP_022141814.1 UPF0548 protein At2g17695 [Momordica charantia] >XP_022141815.1 UPF0548 protein At2g17695 [Momordica charantia] >XP_022141816.1 UPF0548 protein At2g17695 [Momordica charantia] >XP_022141817.1 UPF0548 protein At2g17695 [Momordica charantia]) HSP 1 Score: 76.3 bits (186), Expect = 2.600e-10 Identity = 50/154 (32.47%), Postives = 73/154 (47.40%), Query Frame = 0 Query: 246 EGFRVKTRRVLLGKGPEIYATAKKNMVNWSWNEKVRWSQFLEGEHGINVVSRIRAYG---LFWTMNPLRKVLCHEKAWGKQGGAVAAVAVSTLQGHLLEGEERFCVCWEGGKQGDVWFDMLSFSKGGFPLGKLLMPLIRPLQDRFFADLGNAMQ 397 EGF + R+L+G G E Y KK + NW + + W+ F++ +N + L W + PL+ V +E K + TLQGHLL GEERF + E K VW+++LSFSK L + P + Q F NA++ Sbjct: 50 EGFLLNHARILVGSGVETYEKGKKALQNWR-HFGLNWA-FVDSSTPVNPGVKFCVCSKEFLPWVVMPLQIVYVNENRDAKMARTCFSFGSGTLQGHLLAGEERFSI--EMDKNNQVWYEILSFSKPAHILSFISYPYVILRQKYFAHQSSNAVK 199 The following BLAST results are available for this feature:
BLAST of NO15G02940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02940 ID=NO15G02940|Name=NO15G02940|organism=Nannochloropsis oceanica|type=gene|length=3197bpback to top protein sequence of NO15G02940.1 >NO15G02940.1-protein ID=NO15G02940.1-protein|Name=NO15G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bpback to top Synonyms
Publications
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