NO15G02870, NO15G02870 (gene) Nannochloropsis oceanica

Overview
NameNO15G02870
Unique NameNO15G02870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1075
Alignment locationchr15:783420..784494 -

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Properties
Property NameValue
DescriptionBacterioferritin comigratory protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:783420..784494 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0055114oxidation-reduction process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0016209antioxidant activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain
IPR006311TAT_signal
IPR000866AhpC/TSA
Homology
BLAST of NO15G02870 vs. NCBI_GenBank
Match: EWM22317.1 (bacterioferritin comigratory protein [Nannochloropsis gaditana])

HSP 1 Score: 347.1 bits (889), Expect = 4.700e-92
Identity = 187/256 (73.05%), Postives = 200/256 (78.12%), Query Frame = 0
Query:    3 LSLSSSLXXXXXXXXXXXVAAMACLSHGYVRPLHMSQQQ-----------SHQSHQRSTPSTSLGMDRRDLLSKGIVGGAAAAFASTFTLTTAPPKVRADVPAEGIEAPDFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQA 248
            + LSS             +    CLSH Y+RPLHMSQ Q                   +P+   G+DRR+LL+KG +GGAAAAF  TFTLTT   K  ADVPAEGIEAPDF+LPSSLGK LSLADL K  KYTVLYFFPQVFTSSCTLEAKAFQRDID+Y KLNAQIVGVSVDES KQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISP+GKLVKVFTNVESKVK+HSEEVLEALKALQA
Sbjct:   36 MKLSSMFTLPATSLLLTVLVGAPCLSHAYIRPLHMSQSQPXXXXXXXXXXXXXXXXXXSPTFLAGIDRRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA 291          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: XP_002180671.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48079.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 176.4 bits (446), Expect = 1.100e-40
Identity = 100/194 (51.55%), Postives = 123/194 (63.40%), Query Frame = 0
Query:   54 SLGMDRRDLLSKGIVGGAAAAFASTFTLTTAPPKVRADVPAEGIEAPDFTLPSSLGK-SLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQ 247
            +  +DRR  +    +  AA A      +T + P     VP  G +AP F LP+S G  S SL +L+ + K+TVLYF+P  F+  CTLEA+ FQRDI+ Y  LNAQIVGVSVD   K   F S  GLDF +LSD G +VS  YGSAL +P  G FSNRQTYII PEG L  VFT+VES++ RHS EVLE L  L+
Sbjct:   20 AFSLDRRAFVRDVALTTAAVATG----VTVSAPLPAFAVPVTGAKAPFFELPNSRGSGSTSLKNLINSGKWTVLYFYPGAFSKGCTLEARGFQRDIERYRALNAQIVGVSVDPVEKNAQFCSAEGLDFYMLSDTGGRVSNLYGSALSVPGFGMFSNRQTYIIDPEGNLRWVFTDVESRIARHSVEVLEKLNELE 209          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: CBN79884.1 (Peroxiredoxin family protein [Ectocarpus siliculosus])

HSP 1 Score: 171.4 bits (433), Expect = 3.500e-39
Identity = 85/145 (58.62%), Postives = 106/145 (73.10%), Query Frame = 0
Query:  101 DFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKAL 246
            DFTLPS+ GK +SL DL+K  K+TVLYF+P  FTS CT+EA+ FQ+D + Y   NAQIVGVSVD   K  +F+    L F LLSD GA V++ YGS LDIPF+G+F+NR T+II  +GK+ KVFT+VESKV +HS EVL  L  L
Sbjct:   74 DFTLPSNAGKDISLKDLLKQAKHTVLYFYPGDFTSGCTIEAQGFQKDFEKYGANNAQIVGVSVDSIEKHLNFEKSYNLQFPLLSDIGANVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVESKVAKHSAEVLATLATL 218          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: XP_002287054.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96695.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 170.6 bits (431), Expect = 6.000e-39
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 0
Query:   96 GIEAPDFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQA 248
            G  AP FTLP+S G+ ++L  L  + K+TVLYFFP  FTS CTLEA+ FQ D+D Y+ LN+QIVGVSVD   K + F  E  LDF +L+D+G  +S+AYGS+L IP  G FSNRQTYII P+  +  VF +VES + RHS EVLE LK LQA
Sbjct:   80 GSPAPSFTLPNSKGQQVTLDSLSSSGKWTVLYFFPGAFTSGCTLEARKFQEDVDKYHALNSQIVGVSVDSVDKNSAFCREEKLDFFMLTDEGGSISKAYGSSLSIPGFGTFSNRQTYIIDPQQNVRWVFVDVESHIPRHSAEVLEKLKELQA 231          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: XP_005831354.1 (peroxiredoxin [Guillardia theta CCMP2712] >EKX44374.1 peroxiredoxin [Guillardia theta CCMP2712])

HSP 1 Score: 164.1 bits (414), Expect = 5.600e-37
Identity = 94/196 (47.96%), Postives = 120/196 (61.22%), Query Frame = 0
Query:   56 GMDRRDLLSKGIVGGAAAAFASTFTLTT----APPKVRADVPAEGIEAPDFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQA 248
            G+ RRD         +A A  S  T+ T     P      +P+    APDF LPS+ GK + L DL    K+TVLYF+P  FTS CT+EA  F++       L A+IVGVSVD   K  DF  + GL F LLSD+G KVS+ YGSAL IPF+G FSNRQTYII P G L  VFT+V+S++ +H++EV+  LK L+A
Sbjct:   52 GLSRRDFFK----DTSAMAGVSAITIGTLGFEVPSSFAEGLPSVNAPAPDFLLPSNEGKDIGLKDL--KGKWTVLYFYPGDFTSGCTIEANNFEKASADIRALGAEIVGVSVDSVEKHLDFAKKYGLSFPLLSDQGGKVSQLYGSALQIPFMGSFSNRQTYIIDPSGNLRWVFTDVQSRLNKHADEVIAKLKELKA 241          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: WP_075596620.1 (peroxiredoxin [Leptolyngbya sp. 'hensonii'] >OLP20296.1 peroxiredoxin [Leptolyngbya sp. 'hensonii'])

HSP 1 Score: 134.8 bits (338), Expect = 3.600e-28
Identity = 87/189 (46.03%), Postives = 113/189 (59.79%), Query Frame = 0
Query:   59 RRDLLSKGIVGGAAAAFASTFTLTTAPPKVRADVPAEGIEAPDFTLPSSLGK-SLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQ 247
            RRD L   ++  +A  F S  + T     +   +P  G  AP FTLPSS G  S+SLAD     K+ VLYF+P+ FTS CTLEA+ FQ+D+  Y + N QI+GVS D     T+F    GL F LLSD+G KVS+AYGS     +LG  S R +++I PEG L + FT V   +  HS+EVL  L+ALQ
Sbjct:    4 RRDFLRFLLI--SALVFFSVISFTAPALALGGKLPEIGQPAPAFTLPSSTGDGSISLADY--RGKWVVLYFYPKDFTSGCTLEARRFQQDLPKYLEKNTQIIGVSADSVDSHTEFCDSEGLKFPLLSDRGGKVSQAYGS-----WLGIVSLRHSFLIDPEGILQERFTGVNPAI--HSQEVLARLEALQ 181          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: OGP12280.1 (peroxiredoxin [Deltaproteobacteria bacterium GWA2_47_9])

HSP 1 Score: 132.9 bits (333), Expect = 1.400e-27
Identity = 77/157 (49.04%), Postives = 101/157 (64.33%), Query Frame = 0
Query:   90 ADVPAEGIEAPDFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQ 247
            A++P  G  APDF+L S+    +SL D     K+ VLYF+P+ FT  CT+EA  FQRD+ +Y K+NA IVGVSVD       F ++ GL F LLSD   K+S AYGS  +     + S R T+II+P+G++ KVFT V  KV++HSEEVL AL  LQ
Sbjct:   26 AELPEAGKPAPDFSLKSNENTQVSLKDY--RGKWVVLYFYPKDFTPGCTIEAHNFQRDLAAYEKVNAVIVGVSVDTPELHKSFCAKEGLSFKLLSDIDGKISTAYGSVTEYKG-NKLSARNTFIINPQGRIAKVFTGV--KVEKHSEEVLAALAELQ 177          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: OLB20253.1 (peroxiredoxin [Acidobacteriales bacterium 13_2_20CM_55_8])

HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26
Identity = 79/180 (43.89%), Postives = 111/180 (61.67%), Query Frame = 0
Query:   67 IVGGAAAAFASTFTLTTAPPKVRADVPAEGIEAPDFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQ 247
            IVGG AA FA       +PP+V       G  AP+FTLPS  G+ +SL D   + K+ VLYF+P+ FTS CT+EA  FQRD + Y K NA ++GVSVD       F ++  L+F LL+D   KVS+ YGS +++  + + + R T+II P GK+ +V+T V+    +HS+EVL AL  +Q
Sbjct:   12 IVGGLAARFA----FAGSPPQV-------GTVAPEFTLPSQDGQQVSLKDY--SGKWVVLYFYPKDFTSGCTIEAHNFQRDQEQYAKKNAVVLGVSVDNVDSHKKFCAKEALNFKLLADSDHKVSDEYGSLMNLG-ITQIAKRNTFIIDPAGKIARVYTGVDP--NKHSQEVLVALDEVQ 175          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: WP_020722337.1 (peroxiredoxin [Acidobacteriaceae bacterium KBS 96])

HSP 1 Score: 129.4 bits (324), Expect = 1.500e-26
Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 0
Query:   92 VPAEGIEAPDFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQ 247
            +P  G EAP FTLPS  G ++SLAD     K+ VLYF+P+  T  CT+EA  FQRD+  Y++ NA IVGVSVD +    +F ++ GL F LLSD   KV   YGS  D+    + ++R T++I+PEGK+VKV+T V  +V  HSEEVL AL  ++
Sbjct:   28 MPQAGQEAPVFTLPSQDGTNISLADF--RGKWVVLYFYPKDGTPGCTIEAHNFQRDLSKYSQENAVIVGVSVDTTGSHKEFCAQQGLTFKLLSDTEKKVVSQYGSLRDMGGT-QIASRNTFLINPEGKIVKVWTGVNPRV--HSEEVLAALSGME 177          
BLAST of NO15G02870 vs. NCBI_GenBank
Match: WP_015220405.1 (peroxiredoxin [Cyanobacterium aponinum] >AFZ54682.1 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Cyanobacterium aponinum PCC 10605])

HSP 1 Score: 127.1 bits (318), Expect = 7.600e-26
Identity = 82/172 (47.67%), Postives = 103/172 (59.88%), Query Frame = 0
Query:   75 FASTFTLTTAPPKVRADVPAEGIEAPDFTLPSSLGK-SLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDSYNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKAL 246
            F ++F    +   +    P+    APDFTLP++LG   +SL D     K+ VLYF+PQ FT  CTLEAK FQ+D+  Y+ LNA+IVGVSVD+     +F  E GL F LL+D   KVS+AYGS L     GR S R TYII+PEG LV  F  V   +  HS+EVL  L  L
Sbjct:   16 FIASFNFMPSAMALGGIQPSLNESAPDFTLPTNLGDGEVSLHDY--RGKWVVLYFYPQDFTPGCTLEAKRFQQDLQKYHDLNAEIVGVSVDDVNSHQNFCDEEGLKFPLLADTEGKVSKAYGSWLS----GR-SLRHTYIINPEGILVAKFLGVRPAI--HSQEVLSELNKL 178          
The following BLAST results are available for this feature:
BLAST of NO15G02870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22317.14.700e-9273.05bacterioferritin comigratory protein [Nannochlorop... [more]
XP_002180671.11.100e-4051.55predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBN79884.13.500e-3958.62Peroxiredoxin family protein [Ectocarpus siliculos... [more]
XP_002287054.16.000e-3957.24predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_005831354.15.600e-3747.96peroxiredoxin [Guillardia theta CCMP2712] >EKX4437... [more]
WP_075596620.13.600e-2846.03peroxiredoxin [Leptolyngbya sp. 'hensonii'] >OLP20... [more]
OGP12280.11.400e-2749.04peroxiredoxin [Deltaproteobacteria bacterium GWA2_... [more]
OLB20253.11.200e-2643.89peroxiredoxin [Acidobacteriales bacterium 13_2_20C... [more]
WP_020722337.11.500e-2648.39peroxiredoxin [Acidobacteriaceae bacterium KBS 96][more]
WP_015220405.17.600e-2647.67peroxiredoxin [Cyanobacterium aponinum] >AFZ54682.... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL146nonsL146Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001306NSK001306Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02870.1NO15G02870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|444627gene_4848Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100118g22gene8124Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02870.1NO15G02870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02870 ID=NO15G02870|Name=NO15G02870|organism=Nannochloropsis oceanica|type=gene|length=1075bp
ATGCAGCTGTCGTTGTCGTCATCCCTATCCTCCTCCTCCACTCTCCTAGC
CCTCCTCCTCGTGGCCGCCATGGCCTGCCTCTCCCACGGCTATGTCCGCC
CCCTGCACATGTCCCAACAGCAGTCACATCAGTCGCATCAACGCAGCACG
CCTTCCACCTCATTGGGCATGGACCGCCGTGATCTTTTGAGCAAGGGTAT
TGTGGGCGGGGCGGCCGCTGCATTCGCCAGTACCTTCACCCTGACCACCG
CCCCGCCAAAGGTCCGCGCTGACGTGCCCGCCGAGGGGATCGAAGCCCCC
GATTTCACCCTGCCCTCGAGCTTGGGCAAGTCCTTGTCTCTGGCAGACCT
GGTCAAGACCAAGAAATACACGGTGCTGTATTTCTTCCCTCAGGTCTTCA
CGAGCTCATGCACGTTAGAGGCCAAGGCATTCCAGCGAGACATAGATAGT
TACAACAAGCTAAATGCACAGATTGTGGGGGTGTCGGTCGATGAATCGAC
TAAGCAAACGGACTTCAAGTCCGAGTGTGGGTTAGACTTTATTTgtacgt
tatttcgagaacagggatggtttgggagtaatgggaggatgggaaaacag
ggagtttgggacggatggaggagaaagggatggcgatagatggtagttga
ccgggaaggaaggatagatatgctgaatcttcttccattcctatcaatat
gtaaacacagTGCTGAGCGATAAGGGTGCTAAGGTCTCGGAGGCCTATGG
CTCAGCTTTAGACATTCCGTTTCTCGGCCGTTTTTCCAACCGGCAAACCT
ACATCATCTCCCCGgtacgtgtttgtctcttttgaatttcctacctcgtc
tcgaaacaaggatggataagcattcatgcctcgacggggaatgacactct
gctggcgttcacttgcaaccttctctcaccgcccgccctccctccctccc
tcccttcctgactcctcccttccttacagGAGGGCAAGTTGGTGAAAGTC
TTCACTAACGTTGAGTCCAAGGTGAAGCGGCATTCGGAGGAGGTCCTGGA
GGCGCTCAAGGCACTTCAGGCGTAG
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protein sequence of NO15G02870.1

>NO15G02870.1-protein ID=NO15G02870.1-protein|Name=NO15G02870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=248bp
MQLSLSSSLSSSSTLLALLLVAAMACLSHGYVRPLHMSQQQSHQSHQRST
PSTSLGMDRRDLLSKGIVGGAAAAFASTFTLTTAPPKVRADVPAEGIEAP
DFTLPSSLGKSLSLADLVKTKKYTVLYFFPQVFTSSCTLEAKAFQRDIDS
YNKLNAQIVGVSVDESTKQTDFKSECGLDFILLSDKGAKVSEAYGSALDI
PFLGRFSNRQTYIISPEGKLVKVFTNVESKVKRHSEEVLEALKALQA*
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Synonyms
Publications