NO15G02720, NO15G02720 (gene) Nannochloropsis oceanica

Overview
NameNO15G02720
Unique NameNO15G02720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1749
Alignment locationchr15:741380..743128 +

Link to JBrowse

Properties
Property NameValue
DescriptionRegulator of chromosome condensation (RCC1) family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:741380..743128 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
Homology
BLAST of NO15G02720 vs. NCBI_GenBank
Match: OIW26503.1 (RCC1/BLIP-II protein [Coniochaeta ligniaria NRRL 30616])

HSP 1 Score: 93.2 bits (230), Expect = 2.900e-15
Identity = 110/434 (25.35%), Postives = 180/434 (41.47%), Query Frame = 0
Query:  174 AAQAVMQVACSRDKIYGRTSKGEILYWTRVPSAANEEKGAGQSAXXXXXXXXXXSSQPRFKG--PYKYSTWETNSDNNIIGQKRPASVTHVSAGPEHALFVLSNGAVYGVGANPD-----GRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQLA-QGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEG--------------GYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLS----VAKQIKDLRLL---TFPEVKLPVPVLGCGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQLAVEVE---EGRKQGRMVEGVVCGYDYTGFVVRVDEGGEER 576
            A + +++V+ S D+I G +S G +     +P A ++++   +            S  P + G  P  Y T + +     +G+K    VT + +G EH L + S G V+   ++ +     G+LG+          G             +  P+ + P  +G RV   A G  HS++LD++G  +  G ++  QL  + +      D P  V          +   V +IAAG ++S F+V   +                         +A  T     + WA G G +G LG   + H+S      K + +LR     T   V + +  L  GS+H+AAV+   +   ++RGG    + +  Y   V  WG N   Q GTGK  N+A P  +A   E    GRK+G+  E V          VR+ EGG+ R
Sbjct:  158 AGKDLVKVSLSSDRIIGLSSSGSVY---SIPVARSDQESGEKET-------GGSSWLPFWSGLAPISYRTLKPDLK---VGEK----VTDIKSGLEHCLLLTSKGRVFTAASSSEGYPARGQLGVPGVTWATRPSGP------------YDEPLEV-PALKGFRVKEIAAGDYHSMVLDKEGRVFGFGDNSTGQLGLEPQLDAPFVDAPSLVPVNTLYRGTGQTPRVTSIAAGGSNSFFTVDASKNPAADNTXXXXXXXXXXXXXXXXXTRAGNTAPIQADTWACGEGIHGSLGTGRWTHVSQEPTKIKALSNLREFDEKTNKVVPIRLASLSVGSSHAAAVMDNVTRTVSARGGNGGSENDTNYGADVLWWGGNEHYQLGTGKRNNVANPTYIAPLDERAGRGRKEGK-EEDVHRFQIAPRTTVRIGEGGQGR 560          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: XP_006692128.1 (hypothetical protein CTHT_0016250 [Chaetomium thermophilum var. thermophilum DSM 1495] >EGS22109.1 hypothetical protein CTHT_0016250 [Chaetomium thermophilum var. thermophilum DSM 1495])

HSP 1 Score: 82.4 bits (202), Expect = 5.000e-12
Identity = 89/308 (28.90%), Postives = 139/308 (45.13%), Query Frame = 0
Query:  259 VTHVSAGPEHALFVLSNGAVYGVGANPD---GRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQL-AQGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARV-VEMWASGFGQYGQLGDRAYVHLS-VAKQIKDLRLLT-FPE-----VKLPVPVLGCGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQLAVEVEEGRKQGRMVEG 555
            V  V +G EH L + S G V+   A+ +    R  LG   L  E   + V          + +P  +K L +G ++ + A G  HSL LD  G A++ G + + QL  + E    + D P  V    +   + +   + +IAAG  +S F+V         EK     ++K P+ V  ++W+ G G  G LG   + H+S    +IK L  LT + E     V + +  +  GS+H+AAV+   +    S   P S   +  +   V  WG N   Q GTGK  N+A PV +A    E  ++G   +G
Sbjct:  263 VVDVQSGLEHCLLLTSKGRVFSAAASSEAFPSRGQLGVPGLTWETRPQGVP---------YDTPHEVKGL-EGLKITAIAAGDYHSLALDSTGRAFAFGDNTFGQLGVEPEGGVYSVDAPVIVPLAQRYEHSNQVPKITSIAAGGGNSFFTV----DAIPKEK----SSSKNPSSVTTDLWSCGSGLRGTLGTGKFAHMSPTLTKIKSLSNLTEYDESLNRLVPIRIASVSVGSDHAAAVLGNKTHLTASASTPVS---DTNFGADVLWWGGNEHYQLGTGKRNNVAIPVHIAPLDGERFEKGVPAQG 549          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: XP_005707907.1 (hypothetical protein Gasu_13510 [Galdieria sulphuraria] >EME31387.1 hypothetical protein Gasu_13510 [Galdieria sulphuraria])

HSP 1 Score: 82.4 bits (202), Expect = 5.000e-12
Identity = 85/320 (26.56%), Postives = 129/320 (40.31%), Query Frame = 0
Query:  249 NIIGQKRPASVTHVSAGPEHALFVLSNGAVYGVGANPD-GRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQLA-QGETWKVTKD-RPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVAKQIKDLRLLTFPEVKLPVPVLGCGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQLAVEVEEGRKQGRMVEGVVCGYDYTGFV 566
            N IG+ +   V H+  G  H L +   G V   G +   G+LG G  Q+  E+  E              +P  +  +P+  RV    CG  HS  L EDG  W+CG++ W QL  + E WK   D RP      P++++     +   IA G +H+L  +++++G                     +++ GFG++GQLG   Y  LS   +I  L  L    ++     +  GSNHS  V  +                      ++Y  G N  GQ G G     A P +L   ++        VE V C  D+T  V
Sbjct:  186 NWIGEHK---VDHIHCGKSHCLALTKQGVVLSWGLSDSFGQLGRG--QVTSEDNCE--------------TP-GVVVVPKDIRVQKVCCGDAHSAFLMEDGSVWTCGSNQWLQLGNKEEPWKDGNDYRP-----TPQRVQGIGQRVATDIACGAHHTL--ILIKDG--------------------TVYSCGFGRWGQLGHHNYAQLSYLSRISWLDGLRNGRIR----DIAAGSNHSCLVTTD---------------------GKLYSLGANFAGQLGIGTLQPSAIP-RLVKGLDHFH-----VEKVFCSGDWTAVV 427          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: OWM73833.1 (hypothetical protein CDL15_Pgr018893 [Punica granatum] >PKI43524.1 hypothetical protein CRG98_036086 [Punica granatum])

HSP 1 Score: 82.0 bits (201), Expect = 6.600e-12
Identity = 83/307 (27.04%), Postives = 126/307 (41.04%), Query Frame = 0
Query:  258 SVTHVSAGPEHALFVLSNGAVYGVGANP-DGRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQLAQGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVAKQIKDLRLLTFPEVKLPVPVLGCGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGT-GKAGNIAKPVQLAVEVEEGRKQGRMVEGVVCGYDYT 563
            ++ H++    H   V  +G +Y  G    DGRLGLGP +   + GG              S P  +K LP    V+S +CGG  ++ L E+G  W+ GA+A Y+L +G          +   W+PK I + E+V +  IA+G  HSL   + ++G                   V  W  G G +GQLG     H S+  Q +   + T    +  V  + CG + SAAV                       K ++Y+WG+    Q G  G A     P ++   VE+   +   V  V  G  +T
Sbjct:  209 AIWHIATSGTHTAAVTQSGELYTWGREEGDGRLGLGPGRGPDQTGG-------------LSIPSKVKALPVA--VVSVSCGGFFTMALTEEGQVWNWGANANYELGRGN---------KVGGWQPKPIPSLENVRISQIASGGYHSL--ALTDDGN------------------VLSW--GHGGHGQLG-----HCSIQSQKEPQVIETLANER--VISIACGGSSSAAVT---------------------DKGKLYMWGNGKDAQLGVPGLAELQPCPKEVKFLVEDDGLEPHNVLSVAIGASHT 441          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: XP_010323956.1 (PREDICTED: ultraviolet-B receptor UVR8 [Solanum lycopersicum])

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-11
Identity = 65/231 (28.14%), Postives = 106/231 (45.89%), Query Frame = 0
Query:  257 ASVTHVSAGPEHALFVLSNGAVYGVGANP-DGRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQLAQGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVAKQIKDLRLLTFPEVKLPVPVLGCGSNHSAAV 487
            A + HV+    H   +  +G +Y  G +  DGRLGLGP + H E GG              S P+ +K LP G  V + +CGG  ++ L E+G  W+ GA++ Y+L +G+         +   W+P+ + + + V V  IA+G  HSL   + ++G                    E+ + G G +GQLG+ +  +  V  Q++ L           V  + CG + SAA+
Sbjct:  209 AEICHVATSGTHTAAITKSGELYTWGRDEGDGRLGLGPGRGHNEAGG-------------LSIPLKVKSLPTG--VAAVSCGGFFTMALSEEGELWNWGANSNYELGRGD---------KLGGWKPQPVPSLKGVRVIQIASGGYHSL--ALTDKG--------------------EVLSWGHGGHGQLGNSSLQNQKVPIQVEAL-------AHEKVIYISCGGSSSAAI 386          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: KRW99370.1 (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II [Pseudocohnilembus persalinus])

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-11
Identity = 79/321 (24.61%), Postives = 128/321 (39.88%), Query Frame = 0
Query:  256 PASVTHVSAGPEHALFVLSNGAVYGVGANPDGRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQLAQGETWKVTKDRPEAVFWEPKKI-RAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVAKQIKDLRLLTF-----PEVKLPVPVLGCGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQLAVEVEEGRKQGRMVEGVVCGYDYTGFVVRVDE 571
            P ++  +  G +H + +  NG VY +G +  G+ G G +Q          R  N         P  ++ LP   +++   CG +H+L L E G  +  G+++  QL+  E +    D P    ++P +I    +D IV  IAAGEN S             +  N G          E++A G+   GQLG     H+    +I+ L   T       E  + +  + CG+NH  A++   SV A                  +  WG N  GQ G  K      P+ +      G+ +   +  + CGYD +  V  + E
Sbjct:  177 PNNIVSIQCGEDHFVALTKNGEVYTMGDDTYGQCGQGAEQRSPAPPFYDKRIRN---------PEKVENLP---KIVKVICGHSHNLALSETGQLYGWGSNSQLQLSHEEQYSKI-DEPLVAVYQPIRISHNLQDSIVTDIAAGENTSFLVT---------KNKNTGDC--------EVFACGYNLNGQLGTGYLKHVQDVDKIEGLSNYTIKTNKGTEENIDIKQISCGANHCMALL---SVGA------------------IMEWGQNEYGQLGNKKRAFSEHPIIM------GKFKNENILNISCGYDSSAIVAELQE 440          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: XP_015080364.1 (PREDICTED: ultraviolet-B receptor UVR8 [Solanum pennellii])

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-11
Identity = 65/231 (28.14%), Postives = 106/231 (45.89%), Query Frame = 0
Query:  257 ASVTHVSAGPEHALFVLSNGAVYGVGANP-DGRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQLAQGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVAKQIKDLRLLTFPEVKLPVPVLGCGSNHSAAV 487
            A + HV+    H   +  +G +Y  G +  DGRLGLGP + H E GG              S P+ +K LP G  V + +CGG  ++ L E+G  W+ GA++ Y+L +G+         +   W+P+ + + + V V  IA+G  HSL   + ++G                    E+ + G G +GQLG+ +  +  V  Q++ L           V  + CG + SAA+
Sbjct:  210 AKICHVATSGTHTAAITKSGELYTWGRDEGDGRLGLGPGRGHNEAGG-------------LSIPLKVKSLPTG--VAAVSCGGFFTMALSEEGELWNWGANSNYELGRGD---------KLGGWKPQPVPSLKGVRVIQIASGGYHSL--ALTDKG--------------------EVLSWGHGGHGQLGNSSLQNQKVPIQVEAL-------AHEKVIYISCGGSSSAAI 387          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: OLN96182.1 (Protein FMP25, mitochondrial [Colletotrichum chlorophyti])

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-11
Identity = 116/481 (24.12%), Postives = 190/481 (39.50%), Query Frame = 0
Query:   93 LYVTGSESGRGF----KETVVGVPKEVVFPGPPSPIDSVSFGPAWAAVAKNGNVYLCSGLGEGGPTGGAMVITSTLHEAKGGWFGAAQAVMQVACSRDKIYGRTSKGEILYWTRVPSAANEEKGAGQSAXXXXXXXXXXSSQPRFKGPYKYSTW---------ETNSDNNII--GQKRPASVTHVSAGPEHALFVLSNGAVYGVGANPD-----GRLGL-GPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQL-----AQGETWKVTKDRPEAVFWEPKKIRAFEDVI--VGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVAK-QIKDL-RLLTFPE-----VKLPVPVLGCGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQL 539
            +Y  GS  G+      KETV+  P+ + +       D        AAV + G++ +  GLG           T TL   KG      + + ++A S D++   +  G +     VP+A +++                  S    + P + ++W         ET    N+   G  R   V  +S+G +H L + S G V+   A+       G++G+ G     + EG              +  P  +  L  G  +   A G  HS+ LD+DG  ++ G + + QL     A      V    P A      K+ A   +I  + +IAAG N++ F+V   E G  +  G+   A + P    ++WA G G YG LG   + H++    ++K L  L  F E       + +  +  G+ HS+A +   +    S  G    D +  +   V  WG N   Q GTGK  N+  P  +
Sbjct:  131 VYAWGSNVGKVIDPQSKETVIKSPRRIAYFDGQLLRDIKLTQDFGAAVTEKGDL-VQWGLGFSNTDPSP---TETL---KG------KDISKIAVSNDRVVALSKNGSVY---SVPAARSDQ----------------APSLKALEQPQQSASWIPFWSSSGTETIKSRNLTPRGLGRGEKVVDISSGLQHCLLLTSKGRVFSAAASTSEYPTKGQMGIPGLSWATRPEGP-------------YDQPQEITGL-SGFNISKIATGDLHSVALDKDGKIFTFGDNTFGQLGLPVEANSRQLDVPALLPTA------KLYANTGLIPRITSIAAGGNNTFFTVDATEPGSQIVNGDLAPARRMPRVTADLWACGQGVYGSLGTGKWTHVTAGPVKVKGLSSLFEFDEKTNSMAPIRLSSVSVGTTHSSATMNNVTRTGASTKG---SDNDTNWGADVLFWGGNEHYQLGTGKRTNLNTPTYI 556          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: XP_006666543.1 (mitochondrial protein Fmp25 [Cordyceps militaris CM01] >EGX96666.1 mitochondrial protein Fmp25 [Cordyceps militaris CM01])

HSP 1 Score: 79.3 bits (194), Expect = 4.300e-11
Identity = 82/307 (26.71%), Postives = 127/307 (41.37%), Query Frame = 0
Query:  259 VTHVSAGPEHALFVLSNGAVYGVGAN-----PDGRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGAWSCGADAWYQLAQGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVA-KQIKDLR-LLTFPEVK---LPVPVLG--CGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQLA------VEVEEGRK 548
            VT V +G EHAL + S G V+   ++       G++G+          G             +  P  +K L  G ++   A G  HS +LD+ G  ++ G + + QL            P  V       ++     V +IAAG  ++ F+V   E     + G+   + + P    ++WA+G G YG LG   + H+S A  ++K L  L  F E K    P+ + G   G+ H AAV+   +V   S     S   E  +   V  WG N   Q GTGK  N+  P  +        +  +GRK
Sbjct:  258 VTDVRSGLEHALILTSKGRVFAAASSVASYPSKGQMGIPGLSWETRPAGP------------YDQPQEIKEL-SGFQITHIAAGDYHSAVLDKTGRIFAFGDNTFGQLGFESDGVPVSYAPNMVAVSQLYAKSGLVATVTSIAAGGVNTYFTVDA-EAPKTQDSGSAAPSKRMPRTTSDLWATGQGTYGTLGTGRWTHVSTAPTKVKALSGLFEFDEGKNAMRPIRLKGLQVGTTHCAAVM--DNVTKTSASSKSSSANETNWGSDVLFWGGNEHYQLGTGKRTNLNAPAYIGPLDGGDADAAKGRK 548          
BLAST of NO15G02720 vs. NCBI_GenBank
Match: PIO39487.1 (hypothetical protein AB205_0027090 [Rana catesbeiana])

HSP 1 Score: 79.3 bits (194), Expect = 4.300e-11
Identity = 75/304 (24.67%), Postives = 117/304 (38.49%), Query Frame = 0
Query:  270 LFVLSNGAVYGVGANPDGRLGLGPQQLHQEEGGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACG-GTHSLLLDEDGGAWSCGADAWYQLAQGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGENHSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYVHLSVAKQIKDLRLLTFPEVKLPVPVLGCGSNHSAAVVVEPSVKANSRGGPPSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQLAVEVEEGRKQGRMVEGVVCGYDYTGFVVRVDEGG 573
            L++  N  V+ +G N  G LG G  Q   E                        P+  GK+++S +CG G H +++  DG  +S G +A+ QL  G T +       +     KK        V ++  G +HS+  V   +G                    E++A G+   GQ+G  +  +  + +++       F      V  + CG   S A+V                        +VY WG+N  GQ G G +GN   P ++A        QG  VE +VCGY +T  +   DEGG
Sbjct:   34 LYITKNDEVFVMGTNSSGCLGTGDAQSTIEP--------------------RCLPMLSGKKIVSLSCGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALTPCQVSTNLVNKK--------VASVVCGSHHSM--VTTSDG--------------------EVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKF------VTGIACGQMSSMAIV---------------------ENGEVYAWGYNGNGQLGLGSSGNQPTPCRIAA------LQGIRVEQIVCGYAHT--IALTDEGG 252          
The following BLAST results are available for this feature:
BLAST of NO15G02720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OIW26503.12.900e-1525.35RCC1/BLIP-II protein [Coniochaeta ligniaria NRRL 3... [more]
XP_006692128.15.000e-1228.90hypothetical protein CTHT_0016250 [Chaetomium ther... [more]
XP_005707907.15.000e-1226.56hypothetical protein Gasu_13510 [Galdieria sulphur... [more]
OWM73833.16.600e-1227.04hypothetical protein CDL15_Pgr018893 [Punica grana... [more]
XP_010323956.11.500e-1128.14PREDICTED: ultraviolet-B receptor UVR8 [Solanum ly... [more]
KRW99370.11.500e-1124.61Regulator of chromosome condensation 1/beta-lactam... [more]
XP_015080364.11.500e-1128.14PREDICTED: ultraviolet-B receptor UVR8 [Solanum pe... [more]
OLN96182.11.500e-1124.12Protein FMP25, mitochondrial [Colletotrichum chlor... [more]
XP_006666543.14.300e-1126.71mitochondrial protein Fmp25 [Cordyceps militaris C... [more]
PIO39487.14.300e-1124.67hypothetical protein AB205_0027090 [Rana catesbeia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL141nonsL141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR064ngnoR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001344NSK001344Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02720.1NO15G02720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02720.1NO15G02720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02720 ID=NO15G02720|Name=NO15G02720|organism=Nannochloropsis oceanica|type=gene|length=1749bp
ATGTCCGCTTCGACCCTCTTATTAAGGCGCTCGTGGGCCCGAACTGCTGC
GTGTATGACGAATTCGTCCACTTTTCCACGGCGCGCCTGGTCTTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTACTCCTCCTCCTCCAGCACCCCGGCT
GCCGTTACAGCCGCTGCCACGGCTATCGCTTCTCTGCTCTACCTGGCCTC
TTCTGAGCCCAAGAGTTTTCACAGTAATTCGTCTTCCGCCTCATTCTGCG
CCCCTTCCAAAAGCACGCCCCAAACCCTTTACGTGACAGGTTCAGAGAGC
GGGCGAGGTTTCAAGGAGACCGTGGTTGGAGTGCCCAAAGAAGTCGTTTT
TCCTGGCCCACCCAGCCCGATTGACAGTGTGAGCTTCGGTCCTGCTTGGG
CAGCGGTAGCCAAGAATGGAAACGTTTATCTGTGCTCGGGCTTGGGGGAG
GGAGGTCCGACCGGAGGAGCGATGGTGATCACCAGTACGTTGCATGAGGC
GAAGGGTGGATGGTTTGGAGCGGCACAGGCAGTGATGCAGGTGGCATGTA
GCCGAGATAAAATCTATGGACGGACGAGCAAAGGAGAGATATTATATTGG
ACACGCGTGCCATCAGCGGCAAACGAGGAAAAAGGTGCAGGGCAGTCAGC
AGCAGCAGTAACAGCAGCAGGAGCTGCAGCGTCGTCTCAACCACGTTTTA
AAGGCCCGTACAAATACAGCACTTGGGAAACCAACAGCGACAACAACATT
ATCGGACAAAAACGCCCTGCATCCGTTACACACGTGAGTGCCGGGCCAGA
GCATGCACTCTTCGTTCTGAGCAACGGTGCGGTCTATGGGGTGGGGGCAA
ACCCCGACGGCCGGCTCGGACTCGGGCCACAACAACTACATCAAGAAGAA
GGCGGAGAACATGTCAGGAACAACAATTACCACCGCAAGAATTTCTTTTC
CTCCCCTATTGCCATGAAGCCCCTTCCGCAGGGGAAGAGAGTCCTCAGCG
CGGCCTGTGGAGGGACGCACTCTCTCCTGCTGGATGAGGATGGGGGGGCG
TGGTCCTGCGGGGCCGACGCGTGGTACCAACTCGCACAGGGGGAGACATG
GAAAGTGACGAAAGATCGCCCCGAAGCTGTTTTTTGGGAGCCCAAGAAAA
TCCGGGCGTTTGAAGATGTGATTGTGGGCGCCATTGCCGCAGGAGAGAAC
CATTCCCTCTTTTCTGTCGTCGTGGAGGAGGGTGGTTACTGGCTCGAAAA
GGGCAATTTTGGAAAGGCTGCCAAGACACCTGCGAGGGTTGTGGAGATGT
GGGCGTCGGGTTTTGGTCAGTACGGGCAGCTAGGAGACAGGGCTTACGTG
CACTTGTCGGTGGCAAAGCAGATTAAGGATCTGCGGTTGTTGACATTCCC
CGAAGTGAAGTTGCCCGTGCCGGTGTTGGGGTGTGGGAGCAACCACAGTG
CGGCGGTTGTGGTGGAGCCGAGCGTGAAGGCCAACAGTCGCGGAGGCCCA
CCCTCGAGAGACGTTGAATTAAAATACAAACCACAGGTGTACGTGTGGGG
TCACAATTTGGGGGGCCAATGCGGGACGGGGAAGGCCGGTAATATCGCCA
AGCCAGTGCAGCTTGCGGTGGAAGTGGAGGAGGGACGGAAACAGGGAAGG
ATGGTAGAGGGGGTGGTGTGTGGCTATGATTACACGGGCTTTGTGGTGAG
GGTGGATGAGGGAGGGGAGGAGAGGGGAGGTAAGGGGGGCAGCAAATGA
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protein sequence of NO15G02720.1

>NO15G02720.1-protein ID=NO15G02720.1-protein|Name=NO15G02720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=583bp
MSASTLLLRRSWARTAACMTNSSTFPRRAWSSSSSSSSSSSYSSSSSTPA
AVTAAATAIASLLYLASSEPKSFHSNSSSASFCAPSKSTPQTLYVTGSES
GRGFKETVVGVPKEVVFPGPPSPIDSVSFGPAWAAVAKNGNVYLCSGLGE
GGPTGGAMVITSTLHEAKGGWFGAAQAVMQVACSRDKIYGRTSKGEILYW
TRVPSAANEEKGAGQSAAAVTAAGAAASSQPRFKGPYKYSTWETNSDNNI
IGQKRPASVTHVSAGPEHALFVLSNGAVYGVGANPDGRLGLGPQQLHQEE
GGEHVRNNNYHRKNFFSSPIAMKPLPQGKRVLSAACGGTHSLLLDEDGGA
WSCGADAWYQLAQGETWKVTKDRPEAVFWEPKKIRAFEDVIVGAIAAGEN
HSLFSVVVEEGGYWLEKGNFGKAAKTPARVVEMWASGFGQYGQLGDRAYV
HLSVAKQIKDLRLLTFPEVKLPVPVLGCGSNHSAAVVVEPSVKANSRGGP
PSRDVELKYKPQVYVWGHNLGGQCGTGKAGNIAKPVQLAVEVEEGRKQGR
MVEGVVCGYDYTGFVVRVDEGGEERGGKGGSK*
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Synonyms
Publications