NO15G02630, NO15G02630 (gene) Nannochloropsis oceanica

Overview
NameNO15G02630
Unique NameNO15G02630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1852
Alignment locationchr15:717559..719410 +

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Properties
Property NameValue
DescriptionMetalloprotease family
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:717559..719410 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR019165Peptidase_M76_ATP23
Homology
BLAST of NO15G02630 vs. NCBI_GenBank
Match: EWM22335.1 (metalloprotease family [Nannochloropsis gaditana])

HSP 1 Score: 298.5 bits (763), Expect = 2.100e-77
Identity = 157/237 (66.24%), Postives = 174/237 (73.42%), Query Frame = 0
Query:    1 MDCLKCKASLKSVMARPRPKALLDALAETGIQTLENAPESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSETKISGNYGTGGAAG---------VGGAGATLNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQLCSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGPEQLHAGL 229
            MDCLKCKASLK++MARPRPKALLDALA+TGIQTLEN PESR                                + GN G G   G              +TLNIKC+NCAEEG+AMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALV+MDLT C +LAYSE+RAAREAECHYT QLCSWFKKQCV+STATRSTAT+FP EGA CV  VFE A++D+GP++LH  L
Sbjct:   28 MDCLKCKASLKAIMARPRPKALLDALADTGIQTLENVPESRRAAIAASTQRHQGTGQPDREGGI---------LRGNTGPGDHGGRERGLAEQXXXXXXSTLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQLCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDL 255          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: XP_005855021.1 (argonaute 1, partial [Nannochloropsis gaditana CCMP526] >EKU21333.1 argonaute 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 188.3 bits (477), Expect = 3.100e-44
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 0
Query:   91 ATLNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQLCSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGPEQLHAGL 229
            +TLNIKC+NCAEEG+AMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALV+MDLT C +LAYSE                      CV+STATRSTAT+FP EGA CV  VFE A++D+GP++LH  L
Sbjct:  516 STLNIKCINCAEEGLAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSE----------------------CVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDL 631          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: CBJ30874.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 146.7 bits (369), Expect = 1.000e-31
Identity = 81/156 (51.92%), Postives = 100/156 (64.10%), Query Frame = 0
Query:   79 GTGGAAGVGGAG-----------ATLNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQ--LCSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGP 222
            G  G A  GG G             L + C  C  +G A  ARAY+EAPP  VVLCANRL  RRE+EEA+VHELVH YD+ +  ++L +C  LAYSE+RAAR AEC  TS+  +CS+F+K C +STA RST  LFP +GA CV  VF AA++D  P
Sbjct:   29 GLSGKAKGGGDGKEEGTEPVLEPGGLRLVCQTCPRQGPAAAARAYLEAPPPGVVLCANRLGSRREVEEAVVHELVHAYDYLVAGVELLDCQALAYSEVRAARAAECSKTSRSLVCSYFRKNCARSTAVRSTEGLFPGKGAGCVDAVFNAAYQDQRP 184          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: XP_008868975.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETW02370.1 hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 124.0 bits (310), Expect = 7.200e-25
Identity = 78/234 (33.33%), Postives = 111/234 (47.44%), Query Frame = 0
Query:    1 MDCLKCKASLKSVMARPRPKALLDALAETGIQTLENAPESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSETKISGNYGTGGAAGVGGAGATLNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQL-------------CSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGP 222
            MD  +C A+L   +  PRPK L+DA+     QT +NA +                                                    +L   CL+C  EG+  KARA+  +PP ++VLCANRL    +++E +VHEL+H YD+ +  MDLT  A LA SE+R+ARE+EC+  +Q              C W+ K+CVK  A  +T++LFP +  K V  VF+A F D  P
Sbjct:    1 MDIPRCDAALHEALKEPRPKKLVDAINAFLKQTKKNADDP--------------------------------------------------TSLEFICLDCKSEGVEGKARAFFASPP-AIVLCANRLNTTEDVKEVVVHELIHAYDYTVRNMDLTQPAVLACSEVRSARESECYEKAQALCKNPQLTVLLQGCEWWVKKCVKQNAVLATSSLFPNDAEKHVDKVFDACFNDHSP 183          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: EJK56214.1 (hypothetical protein THAOC_23947 [Thalassiosira oceanica])

HSP 1 Score: 121.7 bits (304), Expect = 3.600e-24
Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 0
Query:   92 TLNIKCLNC-----AEEGIAMKARAYMEAP-PMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQLCSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGP 222
            T+ I+C  C     AEEG    ARAY+  P P+S+VLC+NR   ++E+EE LVHEL+H+YD    +MDL +C +LAYSE+R+AREAECH    L S+F   C +  AT +T  +F +E   CV  VF+ AFKDM P
Sbjct:  166 TIAIECKPCGSSSRAEEG----ARAYVMGPKPLSIVLCSNRTSSQQEIEEVLVHELIHIYDVHSRQMDLRDCRQLAYSEVRSAREAECH--GCLNSFFTGICARDKATEATRNMFADEARSCVAQVFDDAFKDMAP 295          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: XP_009826985.1 (hypothetical protein H257_04261 [Aphanomyces astaci] >ETV83555.1 hypothetical protein H257_04261 [Aphanomyces astaci])

HSP 1 Score: 120.6 bits (301), Expect = 7.900e-24
Identity = 63/144 (43.75%), Postives = 87/144 (60.42%), Query Frame = 0
Query:   93 LNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQL-------------CSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGPEQ 224
            L   CL+C  EG+  KARA+  +PP ++VLCANRL    +++E +VHEL+H YD+ +  MDLT  A LA SE+R+ARE+EC   +Q              C W+ K+CVK  A  +T++LFP + +  V  VFE  FKD  P Q
Sbjct:   47 LEFICLDCKSEGVEGKARAFFASPP-AIVLCANRLNTTEDVKEVVVHELIHAYDYTVRNMDLTQPAVLACSEVRSARESECFEKAQALCKDPQLSMVLHGCDWWVKKCVKQNAIHATSSLFPHDASTHVHNVFETCFKDHTPFQ 189          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: XP_008868973.1 (hypothetical protein H310_05898 [Aphanomyces invadans] >ETW02368.1 hypothetical protein H310_05898 [Aphanomyces invadans])

HSP 1 Score: 116.7 bits (291), Expect = 1.100e-22
Identity = 78/254 (30.71%), Postives = 112/254 (44.09%), Query Frame = 0
Query:    1 MDCLKCKASLKSVMARPRPKALLDALAETGIQTLENAPESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSETKISGNYGTGGAAGVGGAGATLNIKCLNCAEEGIAMKARAYMEAPPM--------------------SVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQL-------------CSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGP 222
            MD  +C A+L   +  PRPK L+DA+     QT +NA +                                                    +L   CL+C  EG+  KARA+  +PP+                    ++VLCANRL    +++E +VHEL+H YD+ +  MDLT  A LA SE+R+ARE+EC+  +Q              C W+ K+CVK  A  +T++LFP +  K V  VF+A F D  P
Sbjct:    1 MDIPRCDAALHEALKEPRPKKLVDAINAFLKQTKKNADDP--------------------------------------------------TSLEFICLDCKSEGVEGKARAFFASPPVRSSITMQLAMVKSDMPPSPQAIVLCANRLNTTEDVKEVVVHELIHAYDYTVRNMDLTQPAVLACSEVRSARESECYEKAQALCKNPQLTVLLQGCEWWVKKCVKQNAVLATSSLFPNDAEKHVDKVFDACFNDHSP 204          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: CCA17587.1 (metalloprotease family M76 putative [Albugo laibachii Nc14])

HSP 1 Score: 116.3 bits (290), Expect = 1.500e-22
Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = 0
Query:   89 AGATLNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTS--------------QLCSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGP 222
            A  +L+  CL C EEG   KARA+  APP ++V CANRL   RE+EE ++HEL+H YD  +  MD+TN + LA SEIRAARE+EC+  +               +  W  K+CV+  A RST ++FP+E    V  + E  + D  P
Sbjct:   36 AKQSLDFVCLMCQEEGPEGKARAFFSAPPPTIVFCANRLHSAREVEETMMHELIHAYDFVVRTMDITNPSILACSEIRAARESECYQKAFALQKLLPESKLLKTMSEWKNKRCVRRHAIRSTQSMFPDEAVDDVDKMLEMCYSDQAP 182          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: GAY00716.1 (metalloprotease family M76, putative [Pythium insidiosum])

HSP 1 Score: 116.3 bits (290), Expect = 1.500e-22
Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = 0
Query:   83 AAGVGGAGATLNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQL--------------CSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGP 222
            AAG     AT++  C++C ++G   +ARA+  APP +VV  ANRL   +E+EE +VHEL+H YD  + KMD+T    LA SEIR+ARE+EC+  ++L               +W  ++CVK  A RST+++FP +  + V  +FE  + D  P
Sbjct:   42 AAGATSTAATIDFVCIDCRDDGPEGRARAFFSAPPPTVVFXANRLHSPKEVEETMVHELIHAYDFTVRKMDITKPXVLACSEIRSARESECYRKARLLAQAMPDVEFFQKSLTWLHRRCVKEHAVRSTSSMFPHDAREQVDKMFEQCYADHSP 194          
BLAST of NO15G02630 vs. NCBI_GenBank
Match: XP_002903803.1 (metalloprotease family M76, putative [Phytophthora infestans T30-4] >EEY54858.1 metalloprotease family M76, putative [Phytophthora infestans T30-4])

HSP 1 Score: 114.4 bits (285), Expect = 5.700e-22
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 0
Query:   93 LNIKCLNCAEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVKMDLTNCAELAYSEIRAAREAECHYTSQL--------------CSWFKKQCVKSTATRSTATLFPEEGAKCVMGVFEAAFKDMGP 222
            ++  CL+C ++G    ARA+  APP +VV CANRL   RE+EE +VHEL+H YD  + KMD+T    LA SEIR+ARE+EC+  ++L                W   +CV+  A RST+++FP E    V  +FE  + D+ P
Sbjct:   38 IDFVCLDCRDDGPEGNARAFFSAPPPTVVFCANRLHSVREVEETMVHELIHAYDFTVRKMDITKSDILACSEIRSARESECYQKAKLLETVLPDVEFFKKSARWLNSRCVREHAVRSTSSMFPAEAHDEVDKMFEQCYADLSP 180          
The following BLAST results are available for this feature:
BLAST of NO15G02630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22335.12.100e-7766.24metalloprotease family [Nannochloropsis gaditana][more]
XP_005855021.13.100e-4468.84argonaute 1, partial [Nannochloropsis gaditana CCM... [more]
CBJ30874.11.000e-3151.92conserved unknown protein [Ectocarpus siliculosus][more]
XP_008868975.17.200e-2533.33hypothetical protein, variant 2 [Aphanomyces invad... [more]
EJK56214.13.600e-2449.26hypothetical protein THAOC_23947 [Thalassiosira oc... [more]
XP_009826985.17.900e-2443.75hypothetical protein H257_04261 [Aphanomyces astac... [more]
XP_008868973.11.100e-2230.71hypothetical protein H310_05898 [Aphanomyces invad... [more]
CCA17587.11.500e-2242.18metalloprotease family M76 putative [Albugo laibac... [more]
GAY00716.11.500e-2239.87metalloprotease family M76, putative [Pythium insi... [more]
XP_002903803.15.700e-2241.26metalloprotease family M76, putative [Phytophthora... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL141nonsL141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR064ngnoR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001334NSK001334Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02630.1NO15G02630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554766gene_4824Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100277g3gene8102Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02630.1NO15G02630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02630 ID=NO15G02630|Name=NO15G02630|organism=Nannochloropsis oceanica|type=gene|length=1852bp
CTTGTGCTTGACCACGTTCACAAGATTTGCTCTATCTTGTCTGTTTTATT
TTCAGTGTACCCTCAGGGAGGAATATAAATGCTGCAGCCGAAGCAGGCCG
AGTCTGCCAAATCTTAGTGTTGCGTTTGACTTGTGAAAAGGCAGGCAACC
CTCCCAAGTGTGGCTGTCTGGCCCATGCTGAAGGCACAAAGAGCAGCAGG
CTGCGGCGACGCGCAACTCTTCTCTCTGCTGCCATATTGATACGTTCATC
CCCGTCTGTCAAGACCGGCACCCTGAACAGTCATACAGCTTGCTTCCAAG
CAGAAGTGCATGCTTTTGTGTGTTTGTGTGCATTGCGTGGCAGGGGAAGA
TGCAGACTTAGATGAGCCCTACCATGTATGACCCCCGAAGCCATGCCATC
CGCACCATCACCAACACGTGACGCACGCCCGCTGCTCATTCCCCAACCCG
CACCACTGCCACATCCACAGTCTTGGCTGCACCAACAGCACCTGAATCTC
CAGTAGCAAGCCCACCACGTGCTGCTTCTGCCGGCGTGGTGTGGCCTTTT
TGTGACTGCTTCAATCCAAGGAGCAATCCCTGTGGGCTCTGATAAGTCGC
CCTTCCCCTCCGCACCCTTGCTCTCCACAATCACCGGCGCCCAGACAGCC
CGATGGACTGTCTGAAGTGCAAGGCCTCTCTCAAGTCCGTCATGGCACGG
CCCCGCCCCAAGGCGCTACTGGATGCGCTGGCCGAGACGGGCATCCAAAC
CTTAGAAAATGCGCCCGAGTCCCGTCGTGCCGCGATAGCCGCCTCGACTC
AAAGACACTTCCAGGGAGGAGGAGGAGGAGGAAGAGGACAACAAGACGGA
GGGGAAAAGAGTGAAACAAAAATAAGTGGAAATTATGGTACGGGGGGCGC
AGCAGGAGTAGGAGGAGCAGGGGCGACTTTAAATATAAAGTGCCTTAACT
GTGCAGAGGAAGGGATTGCGATGAAAGCACGGGCATACATGGAGGCGCCG
CCAATGTCGGTGGTGTTGTGTGCGAATCGTTTGCAAGATCGTCGGGAGAT
GGAGGAGGCACTGGTCCATGAGTTGGTGCATGTTTATGATgtatgtaggg
tagtaggagcaggggagggagggagggaggggagaggggaaaactgacga
aggaggggagagctgtcgacaaggaagtatatgtcctttgttaatcggtg
gaagaggcgtctgttactagatgtccctgattttatgcctgataattact
cctccctccctccctttcttcccacagCACGCCCTTGTCAAGATGGACCT
CACCAATTGCGCCGAGCTTGCCTACAGTGAGATCCGAGCCGCTCGCGAGG
CCGAATGCCATTACACCTCTCAGCTGTGTTCGTGGTTCAAGAAGCAGTGC
GTGAAGAGCACGGCGACCCGGAGCACAGCCACCTTGTTCCCCGAGGAGGG
TGCGAAGTGTGTGATGGGAGTATTTGAGGCTGCCTTTAAGGACATGGGTC
CTGAACAATTGCATGCCGGGTTGACCACAGGAGGGGGGGCTGGAGGGGAT
AAAGGAGGTGGTGCACGAGGAGGGCGGGAAGGAAGAAGGGAGGGAAGAGG
AGGAGAAGGGGGGGGGAAAGGGAGGGAGGTAAGGCCCCGATTGGACGTAC
TCCGACGGCGGCATCGATGAGAGTTTTGATAGATAATCTACAGACAACTG
GCCCTCCCTCCGCCCCTTCCTCCTCCTCTTTCTCCGCGTTTTCGGGGGTA
TCAGGAATGGGGCTGGCGGAGACTTTGGCCACGGCTTTTGGGATTCGATG
ACCAATATATGCGATGGAGATAGAAGGGGGGAGAGGGGAGATCACTCACA
CA
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protein sequence of NO15G02630.1

>NO15G02630.1-protein ID=NO15G02630.1-protein|Name=NO15G02630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bp
MDCLKCKASLKSVMARPRPKALLDALAETGIQTLENAPESRRAAIAASTQ
RHFQGGGGGGRGQQDGGEKSETKISGNYGTGGAAGVGGAGATLNIKCLNC
AEEGIAMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALV
KMDLTNCAELAYSEIRAAREAECHYTSQLCSWFKKQCVKSTATRSTATLF
PEEGAKCVMGVFEAAFKDMGPEQLHAGLTTGGGAGGDKGGGARGGREGRR
EGRGGEGGGKGREVRPRLDVLRRRHR*
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Synonyms
Publications