NO15G02420, NO15G02420 (gene) Nannochloropsis oceanica

Overview
NameNO15G02420
Unique NameNO15G02420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1507
Alignment locationchr15:666785..668291 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:666785..668291 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL141nonsL141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR064ngnoR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02420.1NO15G02420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|443458gene_4800Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02420.1NO15G02420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02420 ID=NO15G02420|Name=NO15G02420|organism=Nannochloropsis oceanica|type=gene|length=1507bp
ATGTTGAACAAGGGGCAAGACGCTGGCACTCCACCCCCTGCCCACCCCAA
GGCAAAGAGCAAGAAAGAGGATGAGCATGAAGAGGAGGACATCGGCAACG
GTAGCGACGCAAGCAGTGGCAGCAGCACCTCGAACAGCAGCAACAGCAGT
GGTAGCAGTAGTGGCCCATCCTCATCCTCCTCTACATTTTCCACATCCTT
GGCGTCGCGATCGCCGCCCCGCTCCGCCAAGATGGGGAAGCACCGAAAGC
GGAAGAGAAAGGAAAAGGAAAAGGGGGAGGAGGAGGAGGAAGAGGAGGAG
GAGGAGGAGGAGAGGCTCAACGGACTTAATCGCCTTGATAGCCATGGGGT
CAGCCGCAGCCGCAGGAGGAGTCCTGTAAGAGAGATGGGAGAATCCCGGA
AGGACAAGAAGAAGGGGAATAGGAGGGAGGAGGAGGTGGATGAGGAGGAG
GATTGGAAGAAGGCAATCACTGCTGGGAAGAAGCGTAGCCGAAGCCCGAA
TAGGGATGGAAGGAAGAAGATGAAGAAGGGGGAAGCTCGTGAAAAGGACT
GGGATATTATGAAGAGTGAGAAACGGCGGCGGGAGGAACGGGAGAACAGG
CGTCGCAGCCGAAGTCGAAGTCGAAgtaaggagcgggaggagcgacgagg
acgtgaaggagggcgggagggaggacgttctgaccgtgatcggcgtttaa
ggggcgaacaccgttcggaggatagGAGGGATCACCACAGGGATCAGAAT
GATCAGCACGGAGGAGGAGGAGGAGGTGGAAGGTGGGGATGCCGCCCTGG
TCGCGACCGTTTCGGCCACCCTTCTCGATATGGTGGGTGCGATGGCCGAG
GGGGTGATGAAGGAGGAGATAGGGGGGAAGGAAGTGGGGGAGGGGGGAGG
CACGAGCAGTACGGTGTGGATGGCGGCGGCTTTGGGGGTGGGGGTGGTGG
TAGCGGACgtgggcgtgatgagagatggcaccagcaatatgcacgtcgtc
ctcttccgccttcctccccccccatgcctcctccttccccaccaaaatca
aagcgctcgggcatttttcaataccttgccgatgtccctggagtgaccct
tcctccctccctccgtccctccctccctccctctgctgcatcagCTGCGC
CGTCCGTCAATGGAGGTAGAGAAGGAGGAGGCGTTGCTGCGTATTCTAAC
ACCTTCGGCGTGCGGGATAATCACCGAGGAGGAGGAGGAGGCGGAAGAAG
AGGAGGAGGAGGAGGAGGAAAAGAGGGAGGAAGATATTGGGGATGCGCAC
GAGAAGGCGGCAGACATCGGGAAATGGAGAAAGAGGTGGACGGAGAAAGG
GGAAGAGGAAGAGAAGGCGACCGGGGCCGAGGAAGAGAAGGAGGGCGGGA
GGGAGGGAGGAGGTTACAAGGAGGGGAGGTGGTGCGGGACGGCTATTCCA
AGGGCATTCATGTCGACGAAGCGCCAGAAAGGGCAAGGCCGTATGCCTGT
GACGTGA
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protein sequence of NO15G02420.1

>NO15G02420.1-protein ID=NO15G02420.1-protein|Name=NO15G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=407bp
MLNKGQDAGTPPPAHPKAKSKKEDEHEEEDIGNGSDASSGSSTSNSSNSS
GSSSGPSSSSSTFSTSLASRSPPRSAKMGKHRKRKRKEKEKGEEEEEEEE
EEEERLNGLNRLDSHGVSRSRRRSPVREMGESRKDKKKGNRREEEVDEEE
DWKKAITAGKKRSRSPNRDGRKKMKKGEAREKDWDIMKSEKRRREERENR
RRSRSRSRRGITTGIRMISTEEEEEVEGGDAALVATVSATLLDMVGAMAE
GVMKEEIGGKEVGEGGGTSSTVWMAAALGVGVVVADLRRPSMEVEKEEAL
LRILTPSACGIITEEEEEAEEEEEEEEEKREEDIGDAHEKAADIGKWRKR
WTEKGEEEEKATGAEEEKEGGREGGGYKEGRWCGTAIPRAFMSTKRQKGQ
GRMPVT*
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Synonyms
Publications