NO15G02280, NO15G02280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02280 vs. NCBI_GenBank
Match: EWM22380.1 (CCT domain protein [Nannochloropsis gaditana]) HSP 1 Score: 242.3 bits (617), Expect = 4.000e-60 Identity = 268/570 (47.02%), Postives = 298/570 (52.28%), Query Frame = 0 Query: 1 MIMATPAPAA-PTADVITGAPAAVNKATHPAATSTATKAGGVTTDPVPAAATPWELKTGSEWASISETSSNATTAGSSVASSVGSVGNSPGPHLN-XXXXXXXXXXXXXXXXXXXXPSXAALPALRQVTLPAGLV-VPAAGEVKRDVSVEMDSEDAEAASILSKVLPDMQKLTSTFADTRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGYEDLLDCLASLASNRAPLGPLEVLHRRVSRMTMSVDDMDVIP-SRSGGQGREGXXXXXXFSSPFAPSQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPEGCDVWRRYESAAGTGAMXXXXXXXXXXXXFARSNLSGGLPPLHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNGSILPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVKLLSKEEGGXXXXXXXXXXXRSVSGHTLAVIEEGV 567 MI+A+PAPAA P A+ GA + +T A + P+PAAATPWE+K+ EW +S+TSSN+ GSVGNSP PH P P+L P G V PAA VKR+ S EM++EDAEAASILSKVLPDM KLT+TFAD R S KGYEDLLDCLASLASNR P+ P H R SR MSVDDMD+ R +G G SPF+PS + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NPEGCD WRRY ++ AM + + + P XXXXXXXXXXXXXXXXXXXXXX ILPHMLAKY+DVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKR+RVKGRFVKL KE G S SG LAVI+EGV Sbjct: 1 MILASPAPAATPAAEKAAGAALTRDSSTTVPKAPVAGSSDAQNA-PIPAAATPWEVKSVQEWGGLSDTSSNSXXXXXXXXXXXGSVGNSPRPHPPVDEEDLACASDLEMAAAVVLSPPTPGQPSLAPSAAPPGPVSAPAACTVKREASEEMETEDAEAASILSKVLPDMHKLTTTFADARGS------IPKKASVQGHGGGSDRAASIGTSREAIGDAGRGSSPGSRRGGAKGYEDLLDCLASLASNRPPVVP---AHCRASR--MSVDDMDLEQHCRRPNKGSRG-------PSPFSPSLL---------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGMEVGRGRRPRAASNPEGCDTWRRYGTSGVPVAMDRKGLAKGQPTHASGAAVHDKAGPA-AGGSMITFHGGLASTADSLASEGHAAASTLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXILPHMLAKYSDVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRVRVKGRFVKLPPKEAGEEEGGGGMSW---SPSGQALAVIQEGV 538
BLAST of NO15G02280 vs. NCBI_GenBank
Match: XP_005853481.1 (hypothetical protein NGA_0445710, partial [Nannochloropsis gaditana CCMP526] >EKU22880.1 hypothetical protein NGA_0445710, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 234.6 bits (597), Expect = 8.400e-58 Identity = 258/543 (47.51%), Postives = 287/543 (52.85%), Query Frame = 0 Query: 1 MIMATPAPAA-PTADVITGAPAAVNKATHPAATSTATKAGGVTTDPVPAAATPWELKTGSEWASISETSSNATTAGSSVASSVGSVGNSPGPHLN-XXXXXXXXXXXXXXXXXXXXPSXAALPALRQVTLPAGLV-VPAAGEVKRDVSVEMDSEDAEAASILSKVLPDMQKLTSTFADTRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGYEDLLDCLASLASNRAPLGPLEVLHRRVSRMTMSVDDMDVIP-SRSGGQGREGXXXXXXFSSPFAPSQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPEGCDVWRRYESAAGTGAMXXXXXXXXXXXXFARSNLSGGLPPLHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNGSILPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVKLLSKEEG 540 MI+A+PAPAA P A+ GA + +T A + P+PAAATPWE+K+ EW +S+TSSN+ GSVGNSP PH P P+L P G V PAA VKR+ S EM++EDAEAASILSKVLPDM KLT+TFAD R S KGYEDLLDCLASLASNR P+ P H R SR MSVDDMD+ R +G G SPF+PS + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NPEGCD WRRY ++ AM + + + P XXXXXXXXXXXXXXXXXXXXXX ILPHMLAKY+DVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKR+RVKGRFVKL KE G Sbjct: 1 MILASPAPAATPAAEKAAGAALTRDSSTTVPKAPVAGSSDAQNA-PIPAAATPWEVKSVQEWGGLSDTSSNSXXXXXXXXXXXGSVGNSPRPHPPVDEEDLACASDLEMAAAVVLSPPTPGQPSLAPSAAPPGPVSAPAACTVKREASEEMETEDAEAASILSKVLPDMHKLTTTFADARGS------IPKKASVQGHGGGSDRAASIGTSREAIGDAGRGSSPGSRRGGAKGYEDLLDCLASLASNRPPVVP---AHCRASR--MSVDDMDLEQHCRRPNKGSRG-------PSPFSPSLL---------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGMEVGRGRRPRAASNPEGCDTWRRYGTSGVPVAMDRKGLAKGQPTHASGAAVHDKAGPA-AGGSMITFHGGLASTADSLASEGHAAASTLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXILPHMLAKYSDVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRVRVKGRFVKLPPKEAG 514
BLAST of NO15G02280 vs. NCBI_GenBank
Match: CBN75530.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.8 bits (268), Expect = 1.200e-19 Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 0 Query: 472 KYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVKL 534 +YAD+YNK+GRIGIYTR ER+AIIARF+ KR RRVWKKKIRY+CRKNLADKR+RVKGRFVK+ Sbjct: 380 RYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKM 441
BLAST of NO15G02280 vs. NCBI_GenBank
Match: EJK53050.1 (hypothetical protein THAOC_27584 [Thalassiosira oceanica]) HSP 1 Score: 107.1 bits (266), Expect = 2.000e-19 Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0 Query: 466 LPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVKLLSKEE 539 LPH LAKY ++YNK+GRIGIYT ER AII +F EKR+RRVW KKIRY+CRK+LADKR+RVKGRFVK + E Sbjct: 378 LPHSLAKYKEMYNKNGRIGIYTPSERAAIIQKFNEKRRRRVWNKKIRYNCRKSLADKRMRVKGRFVKRAEQTE 450
BLAST of NO15G02280 vs. NCBI_GenBank
Match: OEU07813.1 (hypothetical protein FRACYDRAFT_250436 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 105.5 bits (262), Expect = 5.900e-19 Identity = 49/67 (73.13%), Postives = 60/67 (89.55%), Query Frame = 0 Query: 466 LPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVK 533 LPH L KY ++YNK+GRIGIYT ER AIIARF++KR+ R+WKKKIRY+CRKNLAD+R+R+KGRFVK Sbjct: 355 LPHSLKKYKEIYNKNGRIGIYTPGERAAIIARFQKKRKSRMWKKKIRYNCRKNLADRRLRIKGRFVK 421
BLAST of NO15G02280 vs. NCBI_GenBank
Match: XP_002289027.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94463.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 102.1 bits (253), Expect = 6.500e-18 Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0 Query: 466 LPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVK 533 LPH L+KY +VYNK+GRIGIYT ER II +F KR RRVW KKIRY+CRKNLAD+R+RVKGRFVK Sbjct: 380 LPHSLSKYKEVYNKNGRIGIYTPAERAVIITKFNAKRARRVWNKKIRYNCRKNLADRRLRVKGRFVK 446
BLAST of NO15G02280 vs. NCBI_GenBank
Match: GAX24807.1 (hypothetical protein FisN_18Lh110 [Fistulifera solaris]) HSP 1 Score: 102.1 bits (253), Expect = 6.500e-18 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0 Query: 466 LPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVKLLSKE 538 LPH L KY VYNK+GRIGIYT ER AII R+ +KR RRVW KKIRY+CRK+LAD+R+R+KGRFVK +E Sbjct: 256 LPHSLGKYKQVYNKNGRIGIYTPAERAAIIDRYHQKRSRRVWNKKIRYNCRKSLADRRLRIKGRFVKRSEQE 327
BLAST of NO15G02280 vs. NCBI_GenBank
Match: GAX17904.1 (hypothetical protein FisN_18Hh110 [Fistulifera solaris]) HSP 1 Score: 102.1 bits (253), Expect = 6.500e-18 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0 Query: 466 LPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVKLLSKE 538 LPH L KY VYNK+GRIGIYT ER AII R+ +KR RRVW KKIRY+CRK+LAD+R+R+KGRFVK +E Sbjct: 251 LPHSLGKYKQVYNKNGRIGIYTPAERAAIIDRYHQKRSRRVWNKKIRYNCRKSLADRRLRIKGRFVKRSEQE 322
BLAST of NO15G02280 vs. NCBI_GenBank
Match: XP_002186019.1 (CCT motif containing protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65489.1 CCT motif containing protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.4 bits (241), Expect = 1.600e-16 Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 0 Query: 466 LPHMLAKYADVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVKLLSKEE 539 LPH L KY + YN +GRIGIYT +ER A+I R+++KR RRVW KKIRY CRKNLAD+R+RVKGRFVK +E+ Sbjct: 282 LPHSLPKYKEFYN-NGRIGIYTPNERAAVIDRYKDKRCRRVWNKKIRYGCRKNLADRRLRVKGRFVKRCEQEQ 353
BLAST of NO15G02280 vs. NCBI_GenBank
Match: GBG32969.1 (Two-component response regulator-like APRR9 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 82.0 bits (201), Expect = 7.000e-12 Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 0 Query: 476 VYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRIRVKGRFVK 533 +Y + GR G+YT ER A+IA+F +KR++RVW KK+RYSCR+NLA KRIRVKGRFVK Sbjct: 237 IYYRQGRTGVYTAAERKAMIAKFLQKREKRVWHKKVRYSCRRNLAHKRIRVKGRFVK 293 The following BLAST results are available for this feature:
BLAST of NO15G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 16
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02280 ID=NO15G02280|Name=NO15G02280|organism=Nannochloropsis oceanica|type=gene|length=3072bpback to top protein sequence of NO15G02280.1 >NO15G02280.1-protein ID=NO15G02280.1-protein|Name=NO15G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=617bpback to top Synonyms
Publications
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