NO15G02250, NO15G02250 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02250 vs. NCBI_GenBank
Match: EWM22359.1 (mitochondrial 3-hydroxyisobutyryl [Nannochloropsis gaditana]) HSP 1 Score: 294.3 bits (752), Expect = 3.100e-76 Identity = 147/200 (73.50%), Postives = 165/200 (82.50%), Query Frame = 0
Query: 15 QAFLGIRPSPVVCPPSSLSKRGATTLHDSDAFLPRSPPFRAPQSTQHAGEDLD-----TLQGRLFARDTRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMER 210
Q F+ RP P+V P S S RGATT HDSDA++P PFRAPQSTQH G+D+D TLQ RLF D+RRVILFDG+CGFCSDVVN+FINFDGDPRGAFRFASLQGEIGQELL ANG+DT+HFNTIVLVDK++VFTSSDAVL+IA RLK+P PQLA+LAK ++PH DALY FVSSNRHLLAGEKDSCRIP E R
Sbjct: 594 QGFITPRPLPLVAPFS--SHRGATTFHDSDAYMPSPSPFRAPQSTQHPGQDVDGTYTSTLQDRLFETDSRRVILFDGDCGFCSDVVNLFINFDGDPRGAFRFASLQGEIGQELLTANGLDTEHFNTIVLVDKDEVFTSSDAVLEIADRLKEPFPQLARLAKVLLPHVFRDALYSFVSSNRHLLAGEKDSCRIPRREEGRR 791
BLAST of NO15G02250 vs. NCBI_GenBank
Match: WP_013598717.1 (MULTISPECIES: thiol-disulfide oxidoreductase DCC family protein [Weeksella] >ADX68328.1 thiol-disulfide oxidoreductase DCC [Weeksella virosa DSM 16922] >OFM83115.1 thiol-disulfide oxidoreductase [Weeksella sp. HMSC059D05]) HSP 1 Score: 113.2 bits (282), Expect = 9.800e-22 Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 0
Query: 78 TRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMERFLD 213
+ ++ILFDG C C+ V + D + FRFASLQ E GQ L+ +G+DTK+F++IVL+D + FT SDAVL+IA L P L+ AI+P + D Y F++ NR+ L G+K+SC +P+ RFLD
Sbjct: 3 SEKIILFDGICNLCNQSVQFVLEHDKNKH--FRFASLQSEFGQMFLRKHGLDTKNFDSIVLLDGDTFFTKSDAVLRIAKELHHPARLLSYC--AILPKNSRDFFYSFIAKNRYRLFGKKESCWLPTPELKSRFLD 133
BLAST of NO15G02250 vs. NCBI_GenBank
Match: XP_002985503.1 (DCC family protein At1g52590, chloroplastic [Selaginella moellendorffii] >EFJ13377.1 hypothetical protein SELMODRAFT_122411 [Selaginella moellendorffii]) HSP 1 Score: 111.7 bits (278), Expect = 2.800e-21 Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 0
Query: 73 LFARDTRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMERFL 212
LFA DTR VILFDG C C+ VN + D DPR RFA+LQ G+ LL+ +G ++IVLV+K++ + S+AVL+IA L +P P LA LA + P + D Y +++NR+ L G+ + CR E ERFL
Sbjct: 17 LFASDTRPVILFDGVCNLCNGGVNFVL--DRDPRARLRFAALQSNAGRALLEKSGRSRDDISSIVLVEKQRSYIKSEAVLRIAHYLDEPYPSLATLA-LLFPLFLRDPTYDLIANNRYSLFGQTNHCRTSDEQFKERFL 152
BLAST of NO15G02250 vs. NCBI_GenBank
Match: OEU18889.1 (DUF393-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 111.7 bits (278), Expect = 2.800e-21 Identity = 63/155 (40.65%), Postives = 91/155 (58.71%), Query Frame = 0
Query: 65 DLDTLQGRLF-ARDTRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQ-----PLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEME-RFLD 213
D T+ ++F ++D R +ILFDG C C+ VN+ + D DP G RFA+LQ +G+ LL+ NG + ++IVLV K +T SDAVL+I L PL A + + IIP I D +Y V+ NR+ L G+KD CR ++ E E RF++
Sbjct: 6 DPKTVSSKVFSSQDKRPIILFDGVCNLCNTAVNLAL--DWDPSGKLRFAALQSNVGRSLLEVNGRNANDISSIVLVTKNGAYTKSDAVLKITEELTPFSSLLPLKPAAIIGRYIIPKFIRDLIYDGVADNRYDLMGKKDMCRFDADGEFEDRFIN 158
BLAST of NO15G02250 vs. NCBI_GenBank
Match: XP_002987062.2 (DCC family protein At1g52590, chloroplastic isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 111.7 bits (278), Expect = 2.800e-21 Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 0
Query: 73 LFARDTRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMERFL 212
LFA DTR VILFDG C C+ VN + D DPR RFA+LQ G+ LL+ +G ++IVLV+K++ + S+AVL+IA L +P P LA LA + P + D Y +++NR+ L G+ + CR E ERFL
Sbjct: 17 LFASDTRPVILFDGVCNLCNGGVNFVL--DRDPRARLRFAALQSNAGRALLERSGRSRDDISSIVLVEKQRSYIKSEAVLRIAHYLDEPYPSLATLA-LLFPLFLRDPTYDLIANNRYSLFGQTNHCRTSDEQFKERFL 152
BLAST of NO15G02250 vs. NCBI_GenBank
Match: PKL78374.1 (hypothetical protein CVV27_03400 [Candidatus Melainabacteria bacterium HGW-Melainabacteria-1]) HSP 1 Score: 111.3 bits (277), Expect = 3.700e-21 Identity = 60/137 (43.80%), Postives = 82/137 (59.85%), Query Frame = 0
Query: 75 ARDTRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMERFL 212
A ++LFDG C C+ VN I D DP G F+FASLQ E GQ+LLK + T FNT+VL++ SDA L+IA RLK PL LA + I+P + D +Y ++SNR+ G++D CR+P+ + RFL
Sbjct: 13 AEQRHAILLFDGVCNVCNGAVNFII--DHDPDGYFKFASLQSEAGQDLLKRFKLPTADFNTMVLIEHNSYHIKSDAALRIARRLKGPL-SLAYIG-VIVPRFVRDKIYDLIASNRYQWFGKRDQCRLPTPAIRARFL 145
BLAST of NO15G02250 vs. NCBI_GenBank
Match: EJK44712.1 (hypothetical protein THAOC_36727, partial [Thalassiosira oceanica]) HSP 1 Score: 110.9 bits (276), Expect = 4.900e-21 Identity = 56/146 (38.36%), Postives = 90/146 (61.64%), Query Frame = 0
Query: 72 RLFARDTRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQ----PLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEM-ERFLD 213
R+F D R VILFDG C C++ VN+ + D DP+G RF++LQ ++G+ LL+A+G ++IVLV + +T SDA+L I+ L P+ L++LA ++P + D +Y V+ NR+ + G +D CR ++ E +RF+D
Sbjct: 98 RVFETDDRPVILFDGVCNLCNNAVNLAL--DWDPKGKLRFSALQSDVGRSLLQAHGRAADDISSIVLVRTDGAYTKSDAILGISEELNPLPFVPMKPLSRLASGLVPQFLRDLIYDGVADNRYSIMGIRDECRFDADGEFDDRFVD 241
BLAST of NO15G02250 vs. NCBI_GenBank
Match: GAQ89402.1 (hypothetical protein KFL_005180020 [Klebsormidium nitens]) HSP 1 Score: 110.5 bits (275), Expect = 6.300e-21 Identity = 65/192 (33.85%), Postives = 105/192 (54.69%), Query Frame = 0
Query: 26 VCPPSSLSKRGATTLHDSDAFLPRSPPFRAPQ--STQHAGEDLDTLQGR----LFARDTRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMERFL 212
+ P SL++ T L + R P R+ + S++ + D +T + R LFA D R ++LFDG C C++ VN + D DP+G R+A+LQ E G+ LL +G+ +++V+V + +T SDA+L IA L+ P+ + +P DA+Y +++NRH G +D+CR E MERF+
Sbjct: 50 LAPRVSLAQNQVTQLPE-PVTPTRGPAHRSTRDSSSKGSASDQETAEARPGDELFATDKRPIVLFDGICNMCNEGVNFML--DNDPKGKLRYAALQSEAGRTLLIRSGLRPDDHSSMVMVYSNRAYTHSDAILHIAQCLQSPVYKGLGSFGLCVPEFARDAVYSVIAANRHKFMGVRDTCRFLDEEAMERFV 238
BLAST of NO15G02250 vs. NCBI_GenBank
Match: WP_032132430.1 (thiol-disulfide oxidoreductase DCC family protein [Weeksella massiliensis]) HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20 Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 78 TRRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMERFLD 213
T ++ILFDG C C+ V + D + + FRFASLQ E GQ LK NG+DTK+F++I+L+D + ++ SDA L+IA L P L+ I+P I D Y ++ NR+ G+K+SC +P+ RFLD
Sbjct: 3 TEKIILFDGICNLCNQSVQFVLEHDKEKQ--FRFASLQSEFGQSFLKKNGLDTKNFDSIILLDGYKYYSKSDAALRIAKELDHPTKLLSHW--IILPKFIRDFFYSLIAKNRYRFFGKKESCWLPTPELKSRFLD 133
BLAST of NO15G02250 vs. NCBI_GenBank
Match: PSP94495.1 (thiol-disulfide oxidoreductase DCC family protein [Halobacteriales archaeon QS_4_62_28]) HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 0
Query: 79 RRVILFDGECGFCSDVVNIFINFDGDPRGAFRFASLQGEIGQELLKANGMDTKHFNTIVLVDKEQVFTSSDAVLQIASRLKQPLPQLAKLAKAIIPHDILDALYHFVSSNRHLLAGEKDSCRIPSESEMERFLDQ 214
R V+LFDG C C+ +V I FD G F FA LQ ++GQ LL +G+ T F++ VLVD + +T S A L+ A RL P P LA L +P + DA+Y FV+ +R+ + G+KD C +P+ ERF D+
Sbjct: 25 RPVLLFDGVCNLCNGIVRFVIRFDAS--GEFLFAPLQSDVGQALLDRHGLPTDDFDSFVLVDGGEYYTKSTAALKSARRLDGPWPLLAPLLS--LPEGVRDAVYDFVADHRYQVFGKKDECPVPAPETRERFADR 155 The following BLAST results are available for this feature:
BLAST of NO15G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02250 ID=NO15G02250|Name=NO15G02250|organism=Nannochloropsis oceanica|type=gene|length=985bpback to top protein sequence of NO15G02250.1 >NO15G02250.1-protein ID=NO15G02250.1-protein|Name=NO15G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top Synonyms
Publications
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