NO15G02220, NO15G02220 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02220 vs. NCBI_GenBank
Match: EWM22371.1 (cdgsh iron sulfur domain-containing protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 166.0 bits (419), Expect = 6.400e-38 Identity = 76/102 (74.51%), Postives = 88/102 (86.27%), Query Frame = 0
Query: 1 MASELYKALEGHEMVIAAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGP 103
MA+EL+KAL+GHE+V+AA++A L T FMI +K HVNP IKKDQPKVVD+FT+KDIED+MKKDKNGVVA+CRCWRSK FPLCDGSHT NK CGDNVGP
Sbjct: 46 MAAELFKALQGHEVVMAAIVAFLVTAFMILTGRKGGQHVNPGIKKDQPKVVDSFTMKDIEDLMKKDKNGVVAICRCWRSKNFPLCDGSHTAFNKTCGDNVGP 147
BLAST of NO15G02220 vs. NCBI_GenBank
Match: OLQ13669.1 (Phospho-2-dehydro-3-deoxyheptonate aldolase [Symbiodinium microadriaticum]) HSP 1 Score: 99.4 bits (246), Expect = 7.400e-18 Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 0
Query: 24 ATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
A F++ K VNP I K PKV TVKDIED + K +G VA+CRCWRS FP CDGSH ++N+ CGDN GP+V+ K
Sbjct: 752 AAAFLLAKATLKPTPVNPGIDKASPKVATVMTVKDIEDALSKSSSGKVALCRCWRSSKFPFCDGSHGKYNEACGDNTGPLVVSK 835
BLAST of NO15G02220 vs. NCBI_GenBank
Match: XP_005425598.1 (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Geospiza fortis] >XP_005425599.1 PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Geospiza fortis] >XP_005425600.1 PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Geospiza fortis]) HSP 1 Score: 98.6 bits (244), Expect = 1.300e-17 Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AA L LA ++ KDK VNP+I+KD PKVV AF ++D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 23 AAALGYLAYKALLCKDKSSKAMVNPNIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 105
BLAST of NO15G02220 vs. NCBI_GenBank
Match: XP_014123235.1 (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Zonotrichia albicollis]) HSP 1 Score: 97.8 bits (242), Expect = 2.100e-17 Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AA L LA ++ KDK VNP+I+KD PKVV AF ++D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 23 AAALGYLAYKAILCKDKASKAMVNPNIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 105
BLAST of NO15G02220 vs. NCBI_GenBank
Match: KFQ42623.1 (CDGSH iron-sulfur domain-containing protein 1, partial [Nestor notabilis]) HSP 1 Score: 96.3 bits (238), Expect = 6.200e-17 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AAV+ LA F + KDK+ VNP I+KD PKVV AF ++D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 17 AAVVGYLAYRF-LSKDKRSKAMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 98
BLAST of NO15G02220 vs. NCBI_GenBank
Match: XP_010013463.1 (PREDICTED: CDGSH iron-sulfur domain-containing protein 1, partial [Nestor notabilis]) HSP 1 Score: 96.3 bits (238), Expect = 6.200e-17 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AAV+ LA F + KDK+ VNP I+KD PKVV AF ++D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 12 AAVVGYLAYRF-LSKDKRSKAMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 93
BLAST of NO15G02220 vs. NCBI_GenBank
Match: KFO94339.1 (CDGSH iron-sulfur domain-containing protein 1, partial [Buceros rhinoceros silvestris]) HSP 1 Score: 95.9 bits (237), Expect = 8.200e-17 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AA + LA + KDK VNP I+KD PKVV AF V+D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 17 AAAVGYLAYKKFLSKDKCCKAMVNPHIQKDNPKVVHAFDVEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 99
BLAST of NO15G02220 vs. NCBI_GenBank
Match: KFR10969.1 (CDGSH iron-sulfur domain-containing protein 1, partial [Opisthocomus hoazin]) HSP 1 Score: 95.9 bits (237), Expect = 8.200e-17 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AA + LA ++ KDK VNP I+KD PKVV AF ++D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 17 AAAIGYLAYKKLLCKDKCCKAMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 99
BLAST of NO15G02220 vs. NCBI_GenBank
Match: KFV48266.1 (CDGSH iron-sulfur domain-containing protein 1, partial [Tyto alba]) HSP 1 Score: 95.9 bits (237), Expect = 8.200e-17 Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AAV+ LA + KDK VNP I+KD PKVV AF ++D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 18 AAVVGYLAYRKFLSKDKCCKAMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 100
BLAST of NO15G02220 vs. NCBI_GenBank
Match: XP_009933239.1 (PREDICTED: CDGSH iron-sulfur domain-containing protein 1 [Opisthocomus hoazin]) HSP 1 Score: 95.9 bits (237), Expect = 8.200e-17 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 17 AAVLALLATVFMIFKDKKVTMHVNPSIKKDQPKVVDAFTVKDIEDMMKKDKNGVVAMCRCWRSKTFPLCDGSHTEHNKRCGDNVGPVVLKK 108
AA + LA ++ KDK VNP I+KD PKVV AF ++D+ D CRCWRSK FPLCDGSHT+HN+ GDNVGP+++K+
Sbjct: 15 AAAIGYLAYKKLLCKDKCCKAMVNPHIQKDNPKVVHAFDMEDLGDK--------AVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKR 97 The following BLAST results are available for this feature:
BLAST of NO15G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02220 ID=NO15G02220|Name=NO15G02220|organism=Nannochloropsis oceanica|type=gene|length=773bpback to top protein sequence of NO15G02220.1 >NO15G02220.1-protein ID=NO15G02220.1-protein|Name=NO15G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=108bpback to top Synonyms
Publications
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