NO15G02090, NO15G02090 (gene) Nannochloropsis oceanica

Overview
NameNO15G02090
Unique NameNO15G02090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length717
Alignment locationchr15:590958..591674 +

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Properties
Property NameValue
DescriptionGlutathione s-transferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:590958..591674 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036282Glutathione-S-Trfase_C_sf
IPR036249Thioredoxin-like_sf
IPR004045Glutathione_S-Trfase_N
Homology
BLAST of NO15G02090 vs. NCBI_GenBank
Match: EWM22367.1 (glutathione s-transferase [Nannochloropsis gaditana])

HSP 1 Score: 273.9 bits (699), Expect = 4.800e-70
Identity = 140/240 (58.33%), Postives = 171/240 (71.25%), Query Frame = 0
Query:    4 TRMSAAAAAAGDPSDPSRLRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIIIESDVILDHLTTLPE-----PNPLIPPSHEAYRQWQAILVPFLKTARTAIEHGDDASLFSALSQLEEQIPTPGPFLAGATFSVADCSVLPFMQRLNDKYQEVVEKAAPSLNAWYALAQKERCFQATRVGEYWMWW 239
            T +S  +A++  PS+PSRLRLVTNKKCPFAQKAWIAL+  Y                     A S  Y+LLEVGLYGG+GKP WF +ISPKGQVPVLWLPSGR ++ESD ILDHLT+LP      PNPL+P S +AY   +++L PFL++ARTAIE  D  SLFS+L+QL+++I  P PFLAGATFS AD ++LPFMQRL D + E+VE AAP L+ WY  A +E CF+AT V  YWMWW
Sbjct:   35 TPLSMISASSSKPSNPSRLRLVTNKKCPFAQKAWIALEYLY---------------------AGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: XP_002176354.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42590.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21
Identity = 70/218 (32.11%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   19 PSRLRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIII-ESDVILDHLT--TLPEPNPLIPPSHEA----YRQWQAILVPFLKTARTAIEHGDDASLFSALSQLEEQIPTPGPFLAGATFSVADCSVLPFMQRLNDKYQEVVEKAAPSLNAWYALAQKERCFQAT 230
            PS  R VT+KKCPFAQKAW AL+         +QT                 Y+L E+ LYG NGKP WF +++P+G VPVL    G ++  +SDVILD +    +     L P  +E      R+W+  +   L   +  +      +L   L  +++ +   GP+L G   + ADC   PF+ RLND++     K    L +W    +++  F+ T
Sbjct:    7 PSATRFVTHKKCPFAQKAWCALEC--------LQT----------------PYQLEEIPLYGANGKPDWFWKLNPQGTVPVLVCHGGAVVFPDSDVILDQIEKGVVKGAVSLYPDDNEGDQRRIREWRDRINAMLPVGKLCVLDQSAVALQPLLQSMDQAV--VGPYLVGEQITTADCHAFPFLWRLNDEFDLTEYK---RLQSWLKTCEEQTAFRKT 195          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: XP_005838107.1 (hypothetical protein GUITHDRAFT_161619 [Guillardia theta CCMP2712] >EKX51127.1 hypothetical protein GUITHDRAFT_161619 [Guillardia theta CCMP2712])

HSP 1 Score: 109.0 bits (271), Expect = 2.100e-20
Identity = 72/215 (33.49%), Postives = 107/215 (49.77%), Query Frame = 0
Query:   20 SRLRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIIIESDVILDHLTTLPEPNPLIPPSHEA-YRQWQAIL-VPFLKTARTAIE-HGDDASLFSALSQLEEQIPTPGPFLAGATFSVADCSVLPFMQRLNDKYQE--VVEKAAPSLNAWYALAQKERCFQAT 230
            S + L TNK CPFAQKAWIAL+       K ++                  Y+L+E+ LYG  GKP WF +++PKGQVPVL     ++++ESD IL ++         +   HE+    W   L    L + +  I  +G   SL  AL ++EE+I   GPF+ G  F++AD +  PF QR+  +     +  +  P + AWY   + +  F  T
Sbjct:   65 SDVTLYTNKMCPFAQKAWIALEE------KKVK------------------YDLVEISLYGSGGKPRWFLDMNPKGQVPVL-KHGDKVVVESDEILKYIDQHMGSTGDLTKGHESDVAAWMKFLGSEVLPSGKALINGYGSKTSLNEALRRMEERI--QGPFIFGGDFTLADIASAPFFQRMMTEQARLGLNRQEYPKIFAWYEAIKAKPSFSNT 252          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: GAX17002.1 (glutathione S-transferase [Fistulifera solaris])

HSP 1 Score: 99.4 bits (246), Expect = 1.600e-17
Identity = 67/232 (28.88%), Postives = 106/232 (45.69%), Query Frame = 0
Query:   18 DPSRLRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVL---WLPSGRIIIESDVILDHL---TTLPEPNPL--IPPSHEAYRQWQAILVPFLKTARTAIEHGDDASLFSALSQ--LEEQIPTPG-PFLAGATFSVADCSVLPFMQRLNDKYQEVVEKAAPSLNAWYALAQKERCFQATRVGEYWMWW 239
            + S +RL+TNK CPFAQKAW+AL+                         S   YE+ E+ LYG  GKP WF +++P G VPVL      + ++  +SD+IL  +     + + N L           +W+  +   L T + A+    + S  + + Q  LE ++ +    +L G   ++ADC   PF+ RL+ ++        P L AW     K+  F+ T +   W WW
Sbjct:   27 ESSPVRLITNKMCPFAQKAWLALE------------------------CSQIPYEMEEISLYGAGGKPDWFWKLNPAGTVPVLVQEMASATKVWPDSDLILQAIGAGEVVCDNNVLQMTESQRNDVDEWRKQINEMLPTGKKAVLGSGNTSELAKMLQDNLESKLSSQDTDYLVGNAVTIADCHAFPFLWRLDQEFGLATGLNCPKLGAWVERRSKQPEFRKT-IQSAWWWW 233          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: CEM18442.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 90.5 bits (223), Expect = 7.600e-15
Identity = 62/196 (31.63%), Postives = 92/196 (46.94%), Query Frame = 0
Query:   30 CPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIIIESDVILDHLTTLPEPNPLIPPSHEAYRQWQAI----LVPFLKTARTAIEHGDDASLFSALSQLEEQI---PTPGPFLAGATFSVADCSVLPFMQRLNDKYQEVVEKAAPSLNAWYA 219
            CPFAQ+ WIAL+                         +   Y+L EV LYG  GKP WF +++PKG VPVL +  G+ + ES+  LD +  L     L  P+    +QW+ +    L+P  K A       + A+L   +++ E ++   P  G FL G   S+AD S +PF  RL ++   V  +  P  + W A
Sbjct:    2 CPFAQRTWIALE------------------------EAGLPYKLTEVSLYGAGGKPKWFLDLNPKGLVPVLVI-DGQPVAESEATLDAIAELAP--SLATPTPSKRQQWRDMLEQRLIPVGKAAVLNPSSKNMAALRVVIAEWEAKLRERPGKGHFLCGEALSIADVSAVPFWSRLQEEMDCVGAEEFPLTHEWLA 170          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: CBJ25770.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 86.7 bits (213), Expect = 1.100e-13
Identity = 63/169 (37.28%), Postives = 91/169 (53.85%), Query Frame = 0
Query:   75 EVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIIIESDVILDHLTTLPEPNPLIPPSHEAYRQWQAILVPFLKTA-RTAIEHG----DDASLFSALSQLEEQIPTPGPFLAGATFSVADCSVLPFMQRLNDKYQEVVEKAAPSLNAWYALAQKERCFQATRVGEYWMWW 239
            EV LYG  GKP WF +++PKG+VPVL +  G+ I+ S+  +D L     P  L P   EA R W++I+   LK+A + A+  G    D  SL + L  LE  + + GP  A + F+ AD S  PF+QR++ ++    E     L AWYA A      + T   ++W WW
Sbjct:    3 EVSLYGSGGKPSWFMDLNPKGEVPVL-VVDGKPIVGSEETVDFLM----PGELSP---EALR-WRSIVNDRLKSAGKRAVFSGGSETDRNSLNAVLQDLEACL-SNGPERA-SEFTAADASAFPFLQRVHGEFGFPSE--CKRLEAWYASASSRPGVRKTIKQDFWWWW 158          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: OMJ22653.1 (Pyrimidodiazepine synthase [Smittium culicis] >OMJ22811.1 Pyrimidodiazepine synthase [Smittium culicis])

HSP 1 Score: 79.7 bits (195), Expect = 1.300e-11
Identity = 60/231 (25.97%), Postives = 107/231 (46.32%), Query Frame = 0
Query:   16 PSDPSRLRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIIIESDVILDHLTTLPEPNPLIPPSHEAYRQWQA----------ILVPFLKTARTAIEHGDDASLFS----ALSQLEEQIPTP---GPFLAGATFSVADCSVLPFMQRLN--DKYQEVVEKAAPSLNAWYALAQKERCFQ 228
            P    ++ L T K CPFA +  +AL+                         S+  YE +E+ LY    KP W+ E++P  +VP + LPSG I++ES +I+D+++       LIPP+   + Q++A          ++ P  K   T     +   +++     L +  +++ +    GPF+ G  F+ AD +++PF +R++   K   +     P L  +Y  A K+ CF+
Sbjct:    3 PYSEEKISLYTAKICPFAHRVVLALE------------------------ESNLPYEAIEIDLY---NKPEWYHEVNPAMKVPAMRLPSGEIMVESLLIVDYISKQYPKFNLIPPT--PFDQYKASILAGFYESNLITPAYKLLATTSNRSETNDIYADTIEKLQEFNDKLVSNNPIGPFIFGDHFTTADIAIIPFAERIDLVCKMLGLKFNDIPGLERYY--AWKDACFK 202          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: XP_005769516.1 (hypothetical protein EMIHUDRAFT_244445 [Emiliania huxleyi CCMP1516] >EOD17087.1 hypothetical protein EMIHUDRAFT_244445 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 78.2 bits (191), Expect = 3.900e-11
Identity = 69/228 (30.26%), Postives = 101/228 (44.30%), Query Frame = 0
Query:   22 LRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLW-LPSGRIIIESDVILDHLTTLPEPNPLIPPSHEA---YRQWQAILVPFLKTARTAI--------EHGDDASLFSALSQLEEQIPTPGPFLAGATFSVADCSVLPFMQRLN---DKYQEVVEKAA-PSLNAWYALAQKERCFQATRVGE 234
            L   T   CPFAQ+ WI L+      G S      ++ GS    AS+     L +      G   + RE++P+G+VP L    +G  + ES +I ++L    E  PL+P    A    R W       L  A   +        E    A+L +AL   E ++   GP+L G  F++AD + LPF +RL+     Y+++   A  P    W  LA    CF+ATR  E
Sbjct:  313 LDFYTLDMCPFAQRCWIVLEEL----GASYSRRAVNLRGSEEERASA-----LPMPWGSRLGTARYEREVNPRGKVPALRDAETGVTLFESLLINEYLAERQEGGPLLPADPAARARIRLWNEHCDSQLAVAHFTLLMNKDAPSEEAKRAALDAALDVYEARL--VGPYLLGDAFTLADANALPFFERLDFSLRHYKQIDALARHPRTRRWLDLALSRECFRATRQPE 529          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: XP_019950413.1 (PREDICTED: glutathione S-transferase omega-1 [Paralichthys olivaceus])

HSP 1 Score: 77.0 bits (188), Expect = 8.700e-11
Identity = 62/242 (25.62%), Postives = 98/242 (40.50%), Query Frame = 0
Query:    1 MTRTRMSAAAAAAGDPSDPSRLRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIIIESDVILDHLTTLPEPNPLIPPSHEAYRQWQAIL------VPFLKTARTAIEHGDDASLFSALSQ------LEEQIPTPGPFLAGATFSVADCSVLPFMQRLNDKYQEVVEKAAPSLNAWYALAQKERCFQATR 231
            M+  +  A  +AA  P     +RL   + CPFAQ+A + L      N K I+                  +E + + L     KP WF E +P G VP L  P+G +I ES +  D+L  +     L+P S     Q + +L      +PF +       +G+D S   A  +       E+ +     F  G + ++ D  + PF +RL     +     AP L  W     ++   +ATR
Sbjct:    1 MSTEKCFAKGSAAPGPVPKGHIRLYNMRFCPFAQRAKLVL------NAKGIK------------------HETININL---KDKPDWFLERNPLGLVPTLETPAGEVIYESPITCDYLDEVYPEKKLLPSSPFGKAQQKMMLEHFSKVIPFFRKIPAGRTNGEDVSELEAELKEKFKKFNEDLVERKTKFFGGDSITMIDYMMWPFFERLEIFELQHCLDDAPELKKWMESMSEDTAVKATR 215          
BLAST of NO15G02090 vs. NCBI_GenBank
Match: OEU17407.1 (putative dehydroascorbate reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 76.3 bits (186), Expect = 1.500e-10
Identity = 52/214 (24.30%), Postives = 84/214 (39.25%), Query Frame = 0
Query:   17 SDPSRLRLVTNKKCPFAQKAWIALDAYYHSNGKSIQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVLWLPSGRIIIESDVILDHLTTLPEPNPLIPPSHE---------------------------AYRQWQAILVPFLKTARTAIEHGDDAS-LFSALSQLEEQIPTPGPFLAGATFSVADCSVLPFMQRLNDKY 203
            S  S +  VTNK CPFAQKAWIAL+                        A++  Y+L +V LYG  GKP WF +++PKGQVP+L +                                                              +++ L  FL   + A+  G D   ++  L +++  +   GP++     ++ADC+  PF+ R+N+++
Sbjct:   13 SSSSEILFVTNKMCPFAQKAWIALE------------------------AANISYKLEQVSLYGPGGKPDWFWKLNPKGQVPILQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKINTFRSTLNEFLPIGKEAVLGGGDRKRMWKKLKEIDNLLGEEGPYVLDDKLTIADCAAFPFLWRINEEF 202          
The following BLAST results are available for this feature:
BLAST of NO15G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22367.14.800e-7058.33glutathione s-transferase [Nannochloropsis gaditan... [more]
XP_002176354.11.900e-2132.11predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_005838107.12.100e-2033.49hypothetical protein GUITHDRAFT_161619 [Guillardia... [more]
GAX17002.11.600e-1728.88glutathione S-transferase [Fistulifera solaris][more]
CEM18442.17.600e-1531.63unnamed protein product [Vitrella brassicaformis C... [more]
CBJ25770.11.100e-1337.28conserved unknown protein [Ectocarpus siliculosus][more]
OMJ22653.11.300e-1125.97Pyrimidodiazepine synthase [Smittium culicis] >OMJ... [more]
XP_005769516.13.900e-1130.26hypothetical protein EMIHUDRAFT_244445 [Emiliania ... [more]
XP_019950413.18.700e-1125.62PREDICTED: glutathione S-transferase omega-1 [Para... [more]
OEU17407.11.500e-1024.30putative dehydroascorbate reductase [Fragilariopsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL147nonsL147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02090.1NO15G02090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587809gene_4761Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02090.1NO15G02090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02090 ID=NO15G02090|Name=NO15G02090|organism=Nannochloropsis oceanica|type=gene|length=717bp
ATGACGCGAACAAGGATGTCTGCTGCTGCTGCTGCTGCGGGTGATCCCTC
CGACCCAAGCCGCCTCCGCCTCGTGACCAACAAAAAATGCCCCTTTGCAC
AAAAAGCATGGATTGCCCTCGACGCTTACTATCACAGCAACGGCAAGAGT
ATCCAGACTGGTAACGGCGACATCAGCGGATCCACAGCCATAGCTGCAAG
CTCAGGGGGCTACGAATTGCTGGAAGTGGGGTTATATGGAGGGAATGGCA
AGCCAGGCTGGTTCAGAGAGATAAGCCCCAAAGGACAGGTACCTGTTTTG
TGGTTGCCCAGCGGTCGTATTATCATTGAGAGTGACGTTATTTTAGACCA
CCTCACCACCCTCCCGGAGCCCAACCCTCTGATCCCTCCTTCCCACGAGG
CCTACAGACAATGGCAGGCCATCTTAGTACCATTTCTTAAGACAGCTCGT
ACAGCTATCGAGCATGGGGATGATGCCTCCCTTTTCTCCGCCTTGTCGCA
ACTCGAGGAACAAATTCCCACCCCTGGTCCTTTTTTGGCCGGCGCGACAT
TTTCTGTGGCAGACTGCAGTGTCCTACCATTCATGCAGCGGTTAAACGAT
AAGTACCAGGAGGTGGTGGAGAAGGCAGCGCCGAGTCTGAATGCATGGTA
TGCGCTCGCTCAAAAAGAGCGGTGTTTTCAGGCGACGCGTGTGGGGGAAT
ACTGGATGTGGTGGTGA
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protein sequence of NO15G02090.1

>NO15G02090.1-protein ID=NO15G02090.1-protein|Name=NO15G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=239bp
MTRTRMSAAAAAAGDPSDPSRLRLVTNKKCPFAQKAWIALDAYYHSNGKS
IQTGNGDISGSTAIAASSGGYELLEVGLYGGNGKPGWFREISPKGQVPVL
WLPSGRIIIESDVILDHLTTLPEPNPLIPPSHEAYRQWQAILVPFLKTAR
TAIEHGDDASLFSALSQLEEQIPTPGPFLAGATFSVADCSVLPFMQRLND
KYQEVVEKAAPSLNAWYALAQKERCFQATRVGEYWMWW*
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Synonyms
Publications