NO15G02050, NO15G02050 (gene) Nannochloropsis oceanica

Overview
NameNO15G02050
Unique NameNO15G02050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2632
Alignment locationchr15:571499..574130 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:571499..574130 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G02050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL142nonsL142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001422NSK001422Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02050.1NO15G02050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02050.1NO15G02050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02050 ID=NO15G02050|Name=NO15G02050|organism=Nannochloropsis oceanica|type=gene|length=2632bp
ATGGGAGTTGGAGTAGAAGTTAGAGTCGTCATTGTGTTTCGCCGCCCGCC
ACGCCTTTATTTTGAGGCAGTCCATCTGCCAGTGGCCAACCTTCTCGCAG
AATGTGCACTGGTTGTCGGCGAACCTGTTGCGCGGGGTGCCCCGGCCGCG
GATGTTGCGCCTTTCCTCCGAGAACTCGTCGCCTTGCTTGCCCTCGGGCG
GCCGTTTGCCATCCCTGCCTTAGCTCTATGCCTTGgttagctccgttatc
gcctcaccgtgctttttgaatgccgttgtcaactcggagactgcgttgac
cagcccatctggagttccgcattcactagcattccacgctcatcgcagaa
atggaacacgacatcatgaaagtttggccaagaaacggccttctccgaga
gcctctcgtcgctatctgcgtctgcgcaatgctatggattgcacgcatgc
ggacagaaatatcgatcgacaaatgtaagacaaaagtacggagacagaag
tgtttgcattgatcctatgtcatttgagtcacgaacgacacaaatagact
ctttgcgggcccctccaacctcccgcctcctcacctcctcaattccccag
ctttcgcccccatactccttgtgcgacaatgacacagctcggtccaccgc
gcaaaccctttatcctcactttttttctttcgctcctcctccttttctac
cccgtcctttatcagcagcatggcctcctcctccacctccttctcccccc
ctcttcctccctcccaccacgcgcgccagGCAGGAGCGGCGCTGCAACAG
CGGCCTTTCAAGGCCTGGAGAGCAAGATTGAGTCGATGCAATGCGAACAC
AAAGgcaagtgcattgaatcttgcgtgttattgtatttcctattgccccg
caaccacaactcaatcctaccctgctcctcatccgcgtgcgcacaaactt
actccattcctgatcctcatcacagtcatcctcctctctccccattactc
gcacccacagAGAAGCTGCGTGCGCTCGAATGTAAGAAGCGAGAGGCCCA
ATCCATGCAGGAGGACCTTGTTGTCTTCCGCCAGGCAAAGCAGCTCCTCA
AACGCAAGGCCGCCGTCCTTAACATGCAGCTGCAGCAGgtgagtattatg
catagatgtacgtataagtatgcgcagctaaatatgtacgagtaggcaga
aagagcagagatgggtgctatcccagactcgctgcacgtcttgtagcttt
cccccctgagcctccgccgtcaccgccaactcctcctcctcctcctcatc
cttctcatcatcatcctcttcatcctcctcctcatccttcttcttcttct
tcttcttcttcttcttcttcttcttcttcctcttcttctttcctcttgcc
cctcttcatcctcatcctcatcctcctccttctcctttttctcttcctcc
tcatcgccctcctcctcctcctttttctccgcgtcctgcttcttcttctg
cttcttcttctccttcttcctctttccccaaatctccttccgtcgtgcct
cgtcatcgctcctcctcttatttttattttccccatgcatctactgactc
ttttctgttcgacccacataacagGCAAACCTCCAGCTACTCGACTCTCA
GGTGCAGGTCGATACAGTCACAAACGCCAACCAAGAACTGCAATCCCTCT
TTGCCCTCTACTATGACCATTACCACGACCAAGAGCGACAGCAACAGCAG
ACCAACGGCAGCAACAGCGCCACCACCATCACCGCCACCCAGCAAGAGAA
CAACGACGGTGACAACGCTCCTGCTGACGCTGTTACTGACGCTGGTGCTA
CTGTTGCTGCTGCTGCAGCTGCTGACAGTGTTCTAAGAGCGCTGCTGAGT
GGAGGGGCTAAATTGGAATCCAAGGGTTTAGAGAGTGAGGTCCAGCTTCG
CTTGCTCCGCCGTTTGAACCTCCTGATGGAAGCGAAAACCTGGAAGCTTC
TAGAACAACTCGAGGAGAAACAAGAGGAGAAATCTCGTTTGATCCGCCAG
AATCATCTCCGGGGCGCGGAGACGGCGAAGTTGGTGGCTGCGCATGAGGC
AATGGTGGGACAAAAAAAGGCCTTGCACCAACAGAGGGGGGTCAAGATGA
GAGTGCTGCAGCAGGTAGAGACCAAGAAAGCGAGGTTGGAGGAGTTAAAG
AAGAAAGCCCGAGCGATGGATACGTCCTTAAGGGTAGAGGAGGCCAGCTA
CATGAAGATGCATAGTGTTGGTGCTGCGGCGACTCTTTCTGCTTCTACTA
CTACTGTTACTGCTGCTACTGCGTCAGCGTCATCGGTCGTGGCTGCTGCT
TCACTTGCTACTGCTATTGCTGGTGCTGATGCTTCTGCTACCGCTACTGC
TGCTGCTACTGCTGCTACTGCAATTGTCATTCCCTACATCCCGGCACAAG
ATCATGAAATAGCGCGGGGTGGTCGTCGGCTGGAGCAGCAGCAGGAGGAC
AAGAAAGAAGAGAAAGGCAACCGTCGGAAAGTTGAGCAGCATCAGAAGGA
GGAGTGTAGGGAGGAAGACTATAATTTGTCACTTGCTTGCGACGCACAAG
GAGACCCCAAGGAGAACAAGGACAACACCTAG
back to top

protein sequence of NO15G02050.1

>NO15G02050.1-protein ID=NO15G02050.1-protein|Name=NO15G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=482bp
MGVGVEVRVVIVFRRPPRLYFEAVHLPVANLLAECALVVGEPVARGAPAA
DVAPFLRELVALLALGRPFAIPALALCLGRSGAATAAFQGLESKIESMQC
EHKEKLRALECKKREAQSMQEDLVVFRQAKQLLKRKAAVLNMQLQQANLQ
LLDSQVQVDTVTNANQELQSLFALYYDHYHDQERQQQQTNGSNSATTITA
TQQENNDGDNAPADAVTDAGATVAAAAAADSVLRALLSGGAKLESKGLES
EVQLRLLRRLNLLMEAKTWKLLEQLEEKQEEKSRLIRQNHLRGAETAKLV
AAHEAMVGQKKALHQQRGVKMRVLQQVETKKARLEELKKKARAMDTSLRV
EEASYMKMHSVGAAATLSASTTTVTAATASASSVVAAASLATAIAGADAS
ATATAAATAATAIVIPYIPAQDHEIARGGRRLEQQQEDKKEEKGNRRKVE
QHQKEECREEDYNLSLACDAQGDPKENKDNT*
back to top
Synonyms
Publications