NO15G02050.1, NO15G02050.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G02050.1
Unique NameNO15G02050.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1446
Alignment locationchr15:571499..574130 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:571499..574130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G02050.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02050NO15G02050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G02050.1NO15G02050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G02050.1.cds1NO15G02050.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02050.1.cds2NO15G02050.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02050.1.cds3NO15G02050.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G02050.1.cds4NO15G02050.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G02050.1 ID=NO15G02050.1|Name=NO15G02050.1|organism=Nannochloropsis oceanica|type=mRNA|length=1446bp
ATGGGAGTTGGAGTAGAAGTTAGAGTCGTCATTGTGTTTCGCCGCCCGCC
ACGCCTTTATTTTGAGGCAGTCCATCTGCCAGTGGCCAACCTTCTCGCAG
AATGTGCACTGGTTGTCGGCGAACCTGTTGCGCGGGGTGCCCCGGCCGCG
GATGTTGCGCCTTTCCTCCGAGAACTCGTCGCCTTGCTTGCCCTCGGGCG
GCCGTTTGCCATCCCTGCCTTAGCTCTATGCCTTGGCAGGAGCGGCGCTG
CAACAGCGGCCTTTCAAGGCCTGGAGAGCAAGATTGAGTCGATGCAATGC
GAACACAAAGAGAAGCTGCGTGCGCTCGAATGTAAGAAGCGAGAGGCCCA
ATCCATGCAGGAGGACCTTGTTGTCTTCCGCCAGGCAAAGCAGCTCCTCA
AACGCAAGGCCGCCGTCCTTAACATGCAGCTGCAGCAGGCAAACCTCCAG
CTACTCGACTCTCAGGTGCAGGTCGATACAGTCACAAACGCCAACCAAGA
ACTGCAATCCCTCTTTGCCCTCTACTATGACCATTACCACGACCAAGAGC
GACAGCAACAGCAGACCAACGGCAGCAACAGCGCCACCACCATCACCGCC
ACCCAGCAAGAGAACAACGACGGTGACAACGCTCCTGCTGACGCTGTTAC
TGACGCTGGTGCTACTGTTGCTGCTGCTGCAGCTGCTGACAGTGTTCTAA
GAGCGCTGCTGAGTGGAGGGGCTAAATTGGAATCCAAGGGTTTAGAGAGT
GAGGTCCAGCTTCGCTTGCTCCGCCGTTTGAACCTCCTGATGGAAGCGAA
AACCTGGAAGCTTCTAGAACAACTCGAGGAGAAACAAGAGGAGAAATCTC
GTTTGATCCGCCAGAATCATCTCCGGGGCGCGGAGACGGCGAAGTTGGTG
GCTGCGCATGAGGCAATGGTGGGACAAAAAAAGGCCTTGCACCAACAGAG
GGGGGTCAAGATGAGAGTGCTGCAGCAGGTAGAGACCAAGAAAGCGAGGT
TGGAGGAGTTAAAGAAGAAAGCCCGAGCGATGGATACGTCCTTAAGGGTA
GAGGAGGCCAGCTACATGAAGATGCATAGTGTTGGTGCTGCGGCGACTCT
TTCTGCTTCTACTACTACTGTTACTGCTGCTACTGCGTCAGCGTCATCGG
TCGTGGCTGCTGCTTCACTTGCTACTGCTATTGCTGGTGCTGATGCTTCT
GCTACCGCTACTGCTGCTGCTACTGCTGCTACTGCAATTGTCATTCCCTA
CATCCCGGCACAAGATCATGAAATAGCGCGGGGTGGTCGTCGGCTGGAGC
AGCAGCAGGAGGACAAGAAAGAAGAGAAAGGCAACCGTCGGAAAGTTGAG
CAGCATCAGAAGGAGGAGTGTAGGGAGGAAGACTATAATTTGTCACTTGC
TTGCGACGCACAAGGAGACCCCAAGGAGAACAAGGACAACACCTAG
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protein sequence of NO15G02050.1

>NO15G02050.1-protein ID=NO15G02050.1-protein|Name=NO15G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=482bp
MGVGVEVRVVIVFRRPPRLYFEAVHLPVANLLAECALVVGEPVARGAPAA
DVAPFLRELVALLALGRPFAIPALALCLGRSGAATAAFQGLESKIESMQC
EHKEKLRALECKKREAQSMQEDLVVFRQAKQLLKRKAAVLNMQLQQANLQ
LLDSQVQVDTVTNANQELQSLFALYYDHYHDQERQQQQTNGSNSATTITA
TQQENNDGDNAPADAVTDAGATVAAAAAADSVLRALLSGGAKLESKGLES
EVQLRLLRRLNLLMEAKTWKLLEQLEEKQEEKSRLIRQNHLRGAETAKLV
AAHEAMVGQKKALHQQRGVKMRVLQQVETKKARLEELKKKARAMDTSLRV
EEASYMKMHSVGAAATLSASTTTVTAATASASSVVAAASLATAIAGADAS
ATATAAATAATAIVIPYIPAQDHEIARGGRRLEQQQEDKKEEKGNRRKVE
QHQKEECREEDYNLSLACDAQGDPKENKDNT*
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mRNA from alignment at chr15:571499..574130-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G02050.1 ID=NO15G02050.1|Name=NO15G02050.1|organism=Nannochloropsis oceanica|type=mRNA|length=2632bp|location=Sequence derived from alignment at chr15:571499..574130- (Nannochloropsis oceanica)
ATGGGAGTTGGAGTAGAAGTTAGAGTCGTCATTGTGTTTCGCCGCCCGCC
ACGCCTTTATTTTGAGGCAGTCCATCTGCCAGTGGCCAACCTTCTCGCAG
AATGTGCACTGGTTGTCGGCGAACCTGTTGCGCGGGGTGCCCCGGCCGCG
GATGTTGCGCCTTTCCTCCGAGAACTCGTCGCCTTGCTTGCCCTCGGGCG
GCCGTTTGCCATCCCTGCCTTAGCTCTATGCCTTGGTTAGCTCCGTTATC
GCCTCACCGTGCTTTTTGAATGCCGTTGTCAACTCGGAGACTGCGTTGAC
CAGCCCATCTGGAGTTCCGCATTCACTAGCATTCCACGCTCATCGCAGAA
ATGGAACACGACATCATGAAAGTTTGGCCAAGAAACGGCCTTCTCCGAGA
GCCTCTCGTCGCTATCTGCGTCTGCGCAATGCTATGGATTGCACGCATGC
GGACAGAAATATCGATCGACAAATGTAAGACAAAAGTACGGAGACAGAAG
TGTTTGCATTGATCCTATGTCATTTGAGTCACGAACGACACAAATAGACT
CTTTGCGGGCCCCTCCAACCTCCCGCCTCCTCACCTCCTCAATTCCCCAG
CTTTCGCCCCCATACTCCTTGTGCGACAATGACACAGCTCGGTCCACCGC
GCAAACCCTTTATCCTCACTTTTTTTCTTTCGCTCCTCCTCCTTTTCTAC
CCCGTCCTTTATCAGCAGCATGGCCTCCTCCTCCACCTCCTTCTCCCCCC
CTCTTCCTCCCTCCCACCACGCGCGCCAGGCAGGAGCGGCGCTGCAACAG
CGGCCTTTCAAGGCCTGGAGAGCAAGATTGAGTCGATGCAATGCGAACAC
AAAGGCAAGTGCATTGAATCTTGCGTGTTATTGTATTTCCTATTGCCCCG
CAACCACAACTCAATCCTACCCTGCTCCTCATCCGCGTGCGCACAAACTT
ACTCCATTCCTGATCCTCATCACAGTCATCCTCCTCTCTCCCCATTACTC
GCACCCACAGAGAAGCTGCGTGCGCTCGAATGTAAGAAGCGAGAGGCCCA
ATCCATGCAGGAGGACCTTGTTGTCTTCCGCCAGGCAAAGCAGCTCCTCA
AACGCAAGGCCGCCGTCCTTAACATGCAGCTGCAGCAGGTGAGTATTATG
CATAGATGTACGTATAAGTATGCGCAGCTAAATATGTACGAGTAGGCAGA
AAGAGCAGAGATGGGTGCTATCCCAGACTCGCTGCACGTCTTGTAGCTTT
CCCCCCTGAGCCTCCGCCGTCACCGCCAACTCCTCCTCCTCCTCCTCATC
CTTCTCATCATCATCCTCTTCATCCTCCTCCTCATCCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTTCCTCTTGCC
CCTCTTCATCCTCATCCTCATCCTCCTCCTTCTCCTTTTTCTCTTCCTCC
TCATCGCCCTCCTCCTCCTCCTTTTTCTCCGCGTCCTGCTTCTTCTTCTG
CTTCTTCTTCTCCTTCTTCCTCTTTCCCCAAATCTCCTTCCGTCGTGCCT
CGTCATCGCTCCTCCTCTTATTTTTATTTTCCCCATGCATCTACTGACTC
TTTTCTGTTCGACCCACATAACAGGCAAACCTCCAGCTACTCGACTCTCA
GGTGCAGGTCGATACAGTCACAAACGCCAACCAAGAACTGCAATCCCTCT
TTGCCCTCTACTATGACCATTACCACGACCAAGAGCGACAGCAACAGCAG
ACCAACGGCAGCAACAGCGCCACCACCATCACCGCCACCCAGCAAGAGAA
CAACGACGGTGACAACGCTCCTGCTGACGCTGTTACTGACGCTGGTGCTA
CTGTTGCTGCTGCTGCAGCTGCTGACAGTGTTCTAAGAGCGCTGCTGAGT
GGAGGGGCTAAATTGGAATCCAAGGGTTTAGAGAGTGAGGTCCAGCTTCG
CTTGCTCCGCCGTTTGAACCTCCTGATGGAAGCGAAAACCTGGAAGCTTC
TAGAACAACTCGAGGAGAAACAAGAGGAGAAATCTCGTTTGATCCGCCAG
AATCATCTCCGGGGCGCGGAGACGGCGAAGTTGGTGGCTGCGCATGAGGC
AATGGTGGGACAAAAAAAGGCCTTGCACCAACAGAGGGGGGTCAAGATGA
GAGTGCTGCAGCAGGTAGAGACCAAGAAAGCGAGGTTGGAGGAGTTAAAG
AAGAAAGCCCGAGCGATGGATACGTCCTTAAGGGTAGAGGAGGCCAGCTA
CATGAAGATGCATAGTGTTGGTGCTGCGGCGACTCTTTCTGCTTCTACTA
CTACTGTTACTGCTGCTACTGCGTCAGCGTCATCGGTCGTGGCTGCTGCT
TCACTTGCTACTGCTATTGCTGGTGCTGATGCTTCTGCTACCGCTACTGC
TGCTGCTACTGCTGCTACTGCAATTGTCATTCCCTACATCCCGGCACAAG
ATCATGAAATAGCGCGGGGTGGTCGTCGGCTGGAGCAGCAGCAGGAGGAC
AAGAAAGAAGAGAAAGGCAACCGTCGGAAAGTTGAGCAGCATCAGAAGGA
GGAGTGTAGGGAGGAAGACTATAATTTGTCACTTGCTTGCGACGCACAAG
GAGACCCCAAGGAGAACAAGGACAACACCTAG
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Coding sequence (CDS) from alignment at chr15:571499..574130-

>NO15G02050.1 ID=NO15G02050.1|Name=NO15G02050.1|organism=Nannochloropsis oceanica|type=CDS|length=1446bp|location=Sequence derived from alignment at chr15:571499..574130- (Nannochloropsis oceanica)
ATGGGAGTTGGAGTAGAAGTTAGAGTCGTCATTGTGTTTCGCCGCCCGCC
ACGCCTTTATTTTGAGGCAGTCCATCTGCCAGTGGCCAACCTTCTCGCAG
AATGTGCACTGGTTGTCGGCGAACCTGTTGCGCGGGGTGCCCCGGCCGCG
GATGTTGCGCCTTTCCTCCGAGAACTCGTCGCCTTGCTTGCCCTCGGGCG
GCCGTTTGCCATCCCTGCCTTAGCTCTATGCCTTGGCAGGAGCGGCGCTG
CAACAGCGGCCTTTCAAGGCCTGGAGAGCAAGATTGAGTCGATGCAATGC
GAACACAAAGAGAAGCTGCGTGCGCTCGAATGTAAGAAGCGAGAGGCCCA
ATCCATGCAGGAGGACCTTGTTGTCTTCCGCCAGGCAAAGCAGCTCCTCA
AACGCAAGGCCGCCGTCCTTAACATGCAGCTGCAGCAGGCAAACCTCCAG
CTACTCGACTCTCAGGTGCAGGTCGATACAGTCACAAACGCCAACCAAGA
ACTGCAATCCCTCTTTGCCCTCTACTATGACCATTACCACGACCAAGAGC
GACAGCAACAGCAGACCAACGGCAGCAACAGCGCCACCACCATCACCGCC
ACCCAGCAAGAGAACAACGACGGTGACAACGCTCCTGCTGACGCTGTTAC
TGACGCTGGTGCTACTGTTGCTGCTGCTGCAGCTGCTGACAGTGTTCTAA
GAGCGCTGCTGAGTGGAGGGGCTAAATTGGAATCCAAGGGTTTAGAGAGT
GAGGTCCAGCTTCGCTTGCTCCGCCGTTTGAACCTCCTGATGGAAGCGAA
AACCTGGAAGCTTCTAGAACAACTCGAGGAGAAACAAGAGGAGAAATCTC
GTTTGATCCGCCAGAATCATCTCCGGGGCGCGGAGACGGCGAAGTTGGTG
GCTGCGCATGAGGCAATGGTGGGACAAAAAAAGGCCTTGCACCAACAGAG
GGGGGTCAAGATGAGAGTGCTGCAGCAGGTAGAGACCAAGAAAGCGAGGT
TGGAGGAGTTAAAGAAGAAAGCCCGAGCGATGGATACGTCCTTAAGGGTA
GAGGAGGCCAGCTACATGAAGATGCATAGTGTTGGTGCTGCGGCGACTCT
TTCTGCTTCTACTACTACTGTTACTGCTGCTACTGCGTCAGCGTCATCGG
TCGTGGCTGCTGCTTCACTTGCTACTGCTATTGCTGGTGCTGATGCTTCT
GCTACCGCTACTGCTGCTGCTACTGCTGCTACTGCAATTGTCATTCCCTA
CATCCCGGCACAAGATCATGAAATAGCGCGGGGTGGTCGTCGGCTGGAGC
AGCAGCAGGAGGACAAGAAAGAAGAGAAAGGCAACCGTCGGAAAGTTGAG
CAGCATCAGAAGGAGGAGTGTAGGGAGGAAGACTATAATTTGTCACTTGC
TTGCGACGCACAAGGAGACCCCAAGGAGAACAAGGACAACACCTAG
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Synonyms
Publications