NO15G01930, NO15G01930 (gene) Nannochloropsis oceanica

Overview
NameNO15G01930
Unique NameNO15G01930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1356
Alignment locationchr15:540760..542115 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein kinase, ATP binding site
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:540760..542115 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL142nonsL142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001408NSK001408Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01930.1NO15G01930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670510gene_4744Nannochloropsis oceanica (N. oceanica CCMP1779)gene
S6Kgene8038Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01930.1NO15G01930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01930 ID=NO15G01930|Name=NO15G01930|organism=Nannochloropsis oceanica|type=gene|length=1356bp
ATGGATTTGTCTTTGTCGTTGGTTGAGATTGAGGGGGCGGGGGCCACACA
TAGTGATACATTCTGTGGGTTTTCGTACATTGAATCCTCGATTCCCGTCC
CTTCCTCCCTCCCTGCCTATCGGCTGACCCCCGCTGTCAAAGCTGCTGCT
CGTTTGCAAGCAGCTGAGGATCTTGAAGCTTTTGATGGTACGGGGGCTAC
TCCCGGGAGTAAGAAAAAGAAAAAGAAAAAGAAGACACCAGCAGGGGCAG
CAGCGGCAGCGGCAGAAACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGTAGTGGCGATGGAGGTTGTGACGGTAACTGTACC
GGTGATGGGGGAAGAGACATTAAGTCTGATTAGAAGTGGGAGTGGGAGTT
CAACCACCAGTAGTACTGCTACCACCACTGTGGAATCGGGAAAGGGAGAG
GGAAATGAGGAGGGGGAGAAAGGGGGAATTCTCGTAGGGAGGGGAGTGGC
AGCAGAGGGGGATGAGGGAGCGAGTGGTGAGAAGGGACGACAACAACCGC
ATGTGCGAAAATGGGGAGTGGTTGCGGCGCCGAGGGCCGTGCAAGTACAA
GGAGATATCGAAATGCAATTCCCTCCCTTGGGCGGTGCCGTCTCTTCCCA
CCCGATGAGGCAGCAGCAACAACCAGCATTGAAGAGCGTCATTTCAGGCG
TGCTACCGGGGCCGCTTATTCTCCGGAATGGAGCTGCTACAACTACTGCT
CCTGCTGCTACTGCTGCTGTCCCTGCTCAGTCATTGGGAAGCAAGCCAGG
CACCTTTTCGTGGAGTGCTGTTGTAGCCACCCACAAGACGACGACGAGCA
GCATCATCACAACTCCCACCACCTCCAGCAGCAATGCTATCAAAAATCTT
CAGTCCCAACCTCTTTCTGCTTCTACCTCCTCTACCACGGAGAAGCAAGT
AGTCATCCCTTCACCCCCTTCTTATCTTTCAAGCGCAGCTGCTACTATTG
CATCAGCGATTGGTGCCATGGAGAAGGCTAGTATGCCATCCGCATCCCCT
GTGACTGGTGGAACAGGCAGCAGCGACGGAGAGTGCCGGGATGAAGAAAA
TGACGACGGCTTTGTGGTGGTCACAAAGACCAAGCATACCAGCAACACTG
CTGCTGCCGGAAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATCGG
CAGCGACAGCAGCGCCAACAGCTGTCGTCATCCTCTCTCATCGCAAACCG
AACAATCAGTCCTCCTATCAACAAGCTGAATGGTACAGCTACGGCTTATG
TGCCTCACGGTGGAGGAGGAGTGGGGGGGTGGGGGTCATACCGGTCAAAA
ACATGA
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protein sequence of NO15G01930.1

>NO15G01930.1-protein ID=NO15G01930.1-protein|Name=NO15G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=452bp
MDLSLSLVEIEGAGATHSDTFCGFSYIESSIPVPSSLPAYRLTPAVKAAA
RLQAAEDLEAFDGTGATPGSKKKKKKKKTPAGAAAAAAETAAAAAAAAAA
AAAAAVVAMEVVTVTVPVMGEETLSLIRSGSGSSTTSSTATTTVESGKGE
GNEEGEKGGILVGRGVAAEGDEGASGEKGRQQPHVRKWGVVAAPRAVQVQ
GDIEMQFPPLGGAVSSHPMRQQQQPALKSVISGVLPGPLILRNGAATTTA
PAATAAVPAQSLGSKPGTFSWSAVVATHKTTTSSIITTPTTSSSNAIKNL
QSQPLSASTSSTTEKQVVIPSPPSYLSSAAATIASAIGAMEKASMPSASP
VTGGTGSSDGECRDEENDDGFVVVTKTKHTSNTAAAGKKQQQQQQQQQNR
QRQQRQQLSSSSLIANRTISPPINKLNGTATAYVPHGGGGVGGWGSYRSK
T*
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Synonyms
Publications