NO15G01870, NO15G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01870 vs. NCBI_GenBank
Match: EWM22387.1 (uDENN [Nannochloropsis gaditana]) HSP 1 Score: 387.5 bits (994), Expect = 4.700e-104 Identity = 211/389 (54.24%), Postives = 249/389 (64.01%), Query Frame = 0 Query: 2 MAARERLCDFFAVVGPKEDDLENGIVQEAYSIDNLHRALEDVIVDICIVNHPKDAIPFDGNYELLLKPGQANEDTAEG--------------------------EVKLVHKGQETLPEGFELIEKTVGGTPADLGKGDSQQLFLAVRRALIDGAAVCFSAPPMLA-----------------------LTKLGLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNTPMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTAIGSFSPHSAQAGGAGGGTDMGRIWDDDEESVTSSLDEENE------GITMVKGAGTTGATGSQKXXXXXXXXRCGSTNHAGQMS 336 M+A ERLCD+FAVVGPKE DLEN +VQE YSI NLHRALE+ IVDICIVNHP++ IPF+ NYELLLKP Q E EG EV+LV K QE+ P+GFELIEKTVGG DL +G SQQ++LAVR A +D + FS PP+LA L++LGLP E+IYLA++ GPSAGLCDIPY A+SLDWFPHE T+EDFPLP +ELPMFCFP+GVVLKHQKRN+TPMPSYFSFVFTSI+GDRVHV CLQFYELLPDRVL +L+AKQ LT +G+F+ +GG +G WD DEESV SS+ T + AG R +TNH G +S Sbjct: 1 MSANERLCDYFAVVGPKEADLENRVVQEDYSIGNLHRALEEAIVDICIVNHPREVIPFEKNYELLLKPEQVEEGLGEGGKLQLAKHRYICFRRRKHRRTTSYITEVRLVCKSQESPPQGFELIEKTVGGASGDLSRGGSQQVYLAVRYAHVDETSFRFSIPPVLADLCLCSDEKGGSAPMEYTVLPRPLSRLGLPNENIYLAYQQGPSAGLCDIPYEAYSLDWFPHEATYEDFPLPQNELPMFCFPKGVVLKHQKRNDTPMPSYFSFVFTSIDGDRVHVACLQFYELLPDRVLRALEAKQRILTVLGAFA-SGENPTESGGPISLGE-WDSDEESVASSVXXXXXXXXXXVSSTSGQAAGVETGIPKSSPSTQQSPGRRAATNHNGLIS 387
BLAST of NO15G01870 vs. NCBI_GenBank
Match: XP_020610661.1 (C-myc promoter-binding protein-like [Orbicella faveolata]) HSP 1 Score: 88.2 bits (217), Expect = 5.900e-14 Identity = 75/280 (26.79%), Postives = 122/280 (43.57%), Query Frame = 0 Query: 6 ERLCDFFAVVGPKEDDLENGIVQEAYSID---NLHRALEDVIVDI------------CIVNHPKDAIPFDGNYELLLKPG------QANEDTAEGEVKLVHKGQETLPEGFELIEKTVGGTPADLGKGDSQQLFLAVRRA-------LIDGAAVCF-------SAPPMLALTK----LGLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNT-PMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVL 246 +R+ D+F V G L NG A D N+ + DV V CI P P D N+ + +P + + ++ ++++G+E L G ++I T G A++ + F+ RRA + +C P L + G+ D+YL +R A L I Y A L FP E+ +E FPLP D++PMFC P+G +++ N+ P+P + +FV T G +++ + F+ELLP+ L Sbjct: 8 QRVGDYFVVAG-----LGNGKSSNAIQFDDDRNILEPITDVTVIFKSLGERPPRGYTCIEKTPA-GFPADLNHGSIRQPSCFLCIRRGTDKPPLTDIGVLYEGKERLMAGCDIIVYTETGKSANVNNSGGNRTFITYRRANQKMAHSSLAVTEICVIIASKNEKPPHAFCLIEKNLNKGMVGSDVYLCYRKS-LARLRSITYPAEVLSRFPVED-YEGFPLP-DKIPMFCLPQGAIIECWPENSQHPLPIFSTFVLTGASGQKIYGAAVTFFELLPEEQL 278
BLAST of NO15G01870 vs. NCBI_GenBank
Match: XP_014801599.1 (PREDICTED: C-myc promoter-binding protein [Calidris pugnax]) HSP 1 Score: 84.3 bits (207), Expect = 8.600e-13 Identity = 72/296 (24.32%), Postives = 128/296 (43.24%), Query Frame = 0 Query: 7 RLCDFFAVVGPKEDDLENGIVQEAYSIDNLHRAL--EDVIVDICIVNHPKDAIPFDGNYELLLKPGQANEDTAEG---------------------EVKLVHKGQETLPEGFELIEKTVGGTPADL-GKGDSQQLFLAVRRA-------LIDGAAVCFSAP-----PMLALTKL------GLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNT-PMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTAIG 260 R+ D+F V G D+ + +E + D H+ ++ I D+ ++N G + + P + D G ++ +++ G+E + +G E+I+ T G PA++ G SQ++++ RRA + +C P P K+ + +YL ++ A I Y A + +P EE +E FPLP + +P+FC P G ++ N+ P+P + +FV T ++V+ +QFYEL P+ L + Q L A G Sbjct: 7 RVADYFVVAG--LTDISKPLEEEIHFNDACHKIAKPKEPITDVTVINKSLGEEVPQGYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQTTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDKNLNNSMWGSAVYLCYKKS-VAKTNTISYKAGLICRYP-EEDYESFPLP-ESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAAAG 297
BLAST of NO15G01870 vs. NCBI_GenBank
Match: GBG33147.1 (DENN domain-containing protein 4C [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 84.3 bits (207), Expect = 8.600e-13 Identity = 63/211 (29.86%), Postives = 100/211 (47.39%), Query Frame = 0 Query: 80 EVKLVHKGQETLPEGFELIEKT-VGGTPADLGKGD-SQQLFLAVRRALIDGAA------------VCF------SAPP-----MLALTKLG-LPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPM-DELPMFCFPRGVVLKHQKRNNTPMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTAIGSFSP 264 +VK+V +E++PEG+ELI+++ G PA+L G Q +FLA++R + +A +C PP +L T G +YL R G+ D + A + P H+ LP+ DE+ + P G+ ++ N P+P +FSFV T +G ++H +CL FYE+L D L L+ I + SP Sbjct: 196 DVKVVFLDKESVPEGYELIDRSRSGALPANLNYGYLGQTIFLAIKRMPAEPSADERYHSLRPLVDICIINASKQENPPRGYDVILKSTSEGNWTGNKMYLCLRRARPVGMLDRSFGATLAERVPR---HDRPGLPISDEMALLTAPGGLRCLRREETNVPIPKFFSFVMTKEDGSQIHASCLTFYEVLDDSTLDVLERSYDAYLQIMNNSP 403
BLAST of NO15G01870 vs. NCBI_GenBank
Match: XP_005500983.1 (C-myc promoter-binding protein isoform X1 [Columba livia] >XP_021141175.1 C-myc promoter-binding protein isoform X1 [Columba livia] >XP_021141176.1 C-myc promoter-binding protein isoform X1 [Columba livia] >PKK27734.1 DENN/MADD domain containing 4A, transcript variant X1 [Columba livia]) HSP 1 Score: 83.6 bits (205), Expect = 1.500e-12 Identity = 71/294 (24.15%), Postives = 128/294 (43.54%), Query Frame = 0 Query: 7 RLCDFFAVVGPKEDDLENGIVQEAYSIDNLHRAL--EDVIVDICIVNHPKDAIPFDGNYELLLKPGQANEDTAEG---------------------EVKLVHKGQETLPEGFELIEKTVGGTPADL-GKGDSQQLFLAVRRA-------LIDGAAVCFSAP-----PMLALTKL------GLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNT-PMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTA 258 R+ D+F V G D+ + +E + D H+ ++ + D+ ++N G + + P + D G ++ +++ G+E + +G E+I+ T G PA++ G SQ++++ RRA + +C P P K+ + +YL ++ A I Y A + +P EE +E FPLP + +P+FC P G ++ N+ P+P + +FV T ++V+ +QFYEL P+ L + Q LTA Sbjct: 7 RVADYFVVAG--LTDISKPLEEEIHFNDACHKIAKPKEPVTDVTVINKSLGEEVPQGYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEVIQTTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDKNLNNSMWGSAVYLCYKKS-VAKTNTISYKAGLICRYP-EEDYESFPLP-ESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLTA 295
BLAST of NO15G01870 vs. NCBI_GenBank
Match: XP_005500984.1 (C-myc promoter-binding protein isoform X2 [Columba livia] >PKK27735.1 DENN/MADD domain containing 4A, transcript variant X3 [Columba livia]) HSP 1 Score: 83.6 bits (205), Expect = 1.500e-12 Identity = 71/294 (24.15%), Postives = 128/294 (43.54%), Query Frame = 0 Query: 7 RLCDFFAVVGPKEDDLENGIVQEAYSIDNLHRAL--EDVIVDICIVNHPKDAIPFDGNYELLLKPGQANEDTAEG---------------------EVKLVHKGQETLPEGFELIEKTVGGTPADL-GKGDSQQLFLAVRRA-------LIDGAAVCFSAP-----PMLALTKL------GLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNT-PMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTA 258 R+ D+F V G D+ + +E + D H+ ++ + D+ ++N G + + P + D G ++ +++ G+E + +G E+I+ T G PA++ G SQ++++ RRA + +C P P K+ + +YL ++ A I Y A + +P EE +E FPLP + +P+FC P G ++ N+ P+P + +FV T ++V+ +QFYEL P+ L + Q LTA Sbjct: 7 RVADYFVVAG--LTDISKPLEEEIHFNDACHKIAKPKEPVTDVTVINKSLGEEVPQGYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEVIQTTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDKNLNNSMWGSAVYLCYKKS-VAKTNTISYKAGLICRYP-EEDYESFPLP-ESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLTA 295
BLAST of NO15G01870 vs. NCBI_GenBank
Match: XP_008504367.1 (PREDICTED: C-myc promoter-binding protein [Calypte anna]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 71/294 (24.15%), Postives = 127/294 (43.20%), Query Frame = 0 Query: 7 RLCDFFAVVGPKEDDLENGIVQEAYSIDNLHRAL--EDVIVDICIVNHPKDAIPFDGNYELLLKPGQANEDTAEG---------------------EVKLVHKGQETLPEGFELIEKTVGGTPADL-GKGDSQQLFLAVRRA-------LIDGAAVCFSAP-----PMLALTKL------GLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNT-PMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTA 258 R+ D+F V G D+ + +E + D H+ ++ I D+ ++N G + + P + D G ++ +++ G+E + +G E+I+ T G PA++ G SQ++++ RRA + +C P P K+ + +YL ++ A I Y A + +P EE +E FPLP + +P+FC P G ++ N+ P+P + +FV T ++V+ +QFYEL P+ L + Q L A Sbjct: 7 RVADYFVVAG--LTDISKPLEEEIHFNDACHKLAKPKEPITDVTVINKSLGEEVPQGYKCIDITPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQSTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDKNLNNSMWGSAVYLCYKKS-VAKTNTISYKAGLICRYP-EEDYESFPLP-ESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAA 295
BLAST of NO15G01870 vs. NCBI_GenBank
Match: KFO97827.1 (C-myc promoter-binding protein [Calypte anna]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 71/294 (24.15%), Postives = 127/294 (43.20%), Query Frame = 0 Query: 7 RLCDFFAVVGPKEDDLENGIVQEAYSIDNLHRAL--EDVIVDICIVNHPKDAIPFDGNYELLLKPGQANEDTAEG---------------------EVKLVHKGQETLPEGFELIEKTVGGTPADL-GKGDSQQLFLAVRRA-------LIDGAAVCFSAP-----PMLALTKL------GLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNT-PMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTA 258 R+ D+F V G D+ + +E + D H+ ++ I D+ ++N G + + P + D G ++ +++ G+E + +G E+I+ T G PA++ G SQ++++ RRA + +C P P K+ + +YL ++ A I Y A + +P EE +E FPLP + +P+FC P G ++ N+ P+P + +FV T ++V+ +QFYEL P+ L + Q L A Sbjct: 7 RVADYFVVAG--LTDISKPLEEEIHFNDACHKLAKPKEPITDVTVINKSLGEEVPQGYKCIDITPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQSTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDKNLNNSMWGSAVYLCYKKS-VAKTNTISYKAGLICRYP-EEDYESFPLP-ESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAA 295
BLAST of NO15G01870 vs. NCBI_GenBank
Match: XP_010167280.1 (PREDICTED: C-myc promoter-binding protein-like, partial [Antrostomus carolinensis]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 72/294 (24.49%), Postives = 127/294 (43.20%), Query Frame = 0 Query: 7 RLCDFFAVVGPKEDDLENGIVQEAYSIDNLHRAL--EDVIVDICIVNHPKDAIPFDGNYELLLKPGQANEDTAEG---------------------EVKLVHKGQETLPEGFELIEKTVGGTPADL-GKGDSQQLFLAVRRA-------LIDGAAVCFSAP-----PMLALTKL------GLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNT-PMPSYFSFVFTSIEGDRVHVTCLQFYELLPDRVLHSLKAKQHNLTA 258 R+ D+F V G D+ + +E + D H+ ++ I D+ ++N G + + P + D G ++ +++ G+E + +G E+I+ T G PA++ G SQ++++ RRA + +C P P K+ + IYL ++ A I Y A + +P EE +E FPLP + +P+FC P G ++ N+ P+P + +FV T ++V+ +QFYEL P+ L + Q L A Sbjct: 7 RVADYFVVAG--LTDISKPLEEEIHFNDACHKIAKPKEPITDVTVINKSLGEEVPQGYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQTTPYGRPANISGSASSQRVYITYRRASESMTQNTLAVTDICIIIPSKGETPPHTFCKVDKNLNNSMGGAAIYLCYKKS-VAKTNTISYKAGLICRYP-EEDYESFPLP-ESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAA 295
BLAST of NO15G01870 vs. NCBI_GenBank
Match: CBJ26956.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.8 bits (203), Expect = 2.500e-12 Identity = 53/174 (30.46%), Postives = 85/174 (48.85%), Query Frame = 0 Query: 72 ANEDTAEGEVKLVHKGQE-TLPE--GFELIEKTVGGTPADLGKGDSQQLFLAVRRALIDGAAVCFSAPPMLALTKLGLPAEDIYLAFRHGPSAGLCDIPYTAHSLDWFPHEETHEDFPLPMDELPMFCFPRGVVLKHQKRNNTPMPSYFSFVFTSIEGDRVHVTCLQFYE-LLP 242 + D E+++V G LPE G+EL+EK+ G A+L K ++ G + + L ++ G + +P+ + LD +P E+ FP P D+LPMF +P+G++L+ + +TP S+FSFVFT++ G R CL FYE +LP Sbjct: 31 SQRDDYIAEIQVVFGGAAYELPEGQGWELVEKSASGKGANLNKDLNR-----------------------------GKSGDVVQLGYQVGGALSTVRLPFRSMILDRYP-EQDSPLFPFPGDQLPMFVYPKGMLLERRSGRDTPKSSFFSFVFTNVHGCRTFTACLTFYEPMLP 174 The following BLAST results are available for this feature:
BLAST of NO15G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01870 ID=NO15G01870|Name=NO15G01870|organism=Nannochloropsis oceanica|type=gene|length=2654bpback to top protein sequence of NO15G01870.1 >NO15G01870.1-protein ID=NO15G01870.1-protein|Name=NO15G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bpback to top Synonyms
Publications
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