NO15G01730, NO15G01730 (gene) Nannochloropsis oceanica

Overview
NameNO15G01730
Unique NameNO15G01730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3487
Alignment locationchr15:490751..494237 +

Link to JBrowse

Properties
Property NameValue
DescriptionGeranylgeranyl transferase type-2 subunit alpha
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:490751..494237 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0018344protein geranylgeranylation
GO:0018342protein prenylation
GO:0018344protein geranylgeranylation
GO:0018342protein prenylation
Vocabulary: Cellular Component
TermDefinition
GO:0005968Rab-protein geranylgeranyltransferase complex
GO:0005968Rab-protein geranylgeranyltransferase complex
Vocabulary: Molecular Function
TermDefinition
GO:0008318protein prenyltransferase activity
GO:0016740transferase activity
GO:0008318protein prenyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR032955RabGGTase_alpha
IPR002088Prenyl_trans_a
Homology
BLAST of NO15G01730 vs. NCBI_GenBank
Match: EWM22438.1 (geranylgeranyl transferase type-2 subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 414.5 bits (1064), Expect = 4.100e-112
Identity = 228/412 (55.34%), Postives = 278/412 (67.48%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELEN-----ALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPC--TASSPSCSSATSP-----SQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLK----------EGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGLFERLGRMDPDHAKRYENIVVS 422
            MHGRRK E Q   LARS+AEKEAA++KV KYKQL+ LAL+QR+E       + T + L+  L LS+QLLR+NPDVYTLWNHRKE I AS V+R E EG    +   E E       LPP SFLQTEL ++ +CI+KNPKSYGAWHHRRWLL+HAF    +A+ P+ SS  +P      QL   LD+E+ LCA+LLD+DERNFHCW+YRRWVVS+HP R+  DEFEFST+RI KNFSNYSAFHHRA+Y   +L E+   L+P  FL +ELDMVQQA FTEPDDQT+WWYHQ+LISL L           E G                E EV+++R L EEGE E      GGGYRWAVLTLA LL +LA  +  + EE     LR ES+ L +RL  +DPDHA RY++++ S
Sbjct:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLALAWDTEREKELGERGDQELTPRGVSFAQRVLEKEVKVLRELVEEGEAE------GGGYRWAVLTLADLLGKLARRKEGKSEEAS---LRAESQKLLKRLPALDPDHAGRYQDMLDS 403          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: CBN74500.1 (Rab geranylgeranyltransferase alpha [Ectocarpus siliculosus])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 133/425 (31.29%), Postives = 197/425 (46.35%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGE----------LENALPPN-------SFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASS-----------------------QGEEGEEGRGEVLRKESRGLFERLGRMDPDHAKRYE 417
            MHGR+K++     L +++ EK+A R K+  YK++V  A++ +R     +          E   L  +LLR++PD Y++WN RKEA+ A       +E A++R+ G +              L P+          + EL++  +CI++NPKSY AWHH +W LE                      + L  ++ALCA  L++D RNFHCW +R W V++  G SA +EF+F+T +I +NFSNYSAFH R+  L   + E+G   +    L  ELD+   A FTEP DQ+ WWYH +L  L   + G                E        L E  E E   K       WA + L  + ++LA++                           G    GEV R+  RG+  RL  +DP H + YE
Sbjct:    1 MHGRKKSD-----LPQTKEEKDAVRAKISNYKKVVG-AIRHKRATGQMD---------AEYKQLLGKLLRLHPDYYSMWNFRKEAVLAE---LSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQKKKIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGR-------------SALAGDLALCATFLELDGRNFHCWAHRMW-VAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGH--DRWQLLSDELDLTHDAMFTEPADQSVWWYHHFL--LTWADDGTDSCSDSERYENILRAEAAT-----LGELIEVEVRCK-------WAEVALLLVSQRLANALEPRPQPXXXXXXXXXXXXXXXXXXXXGSTEAGEV-RESCRGMAARLSELDPMHGRFYE 376          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: XP_009536480.1 (hypothetical protein PHYSODRAFT_565126 [Phytophthora sojae] >EGZ08308.1 hypothetical protein PHYSODRAFT_565126 [Phytophthora sojae])

HSP 1 Score: 176.0 bits (445), Expect = 2.400e-40
Identity = 119/387 (30.75%), Postives = 192/387 (49.61%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGLFERLGRMDPDHAKRYENI 419
            MHGR K+  +     +++A+++    KV  Y ++    L+ +R+   +            AL L++ LL +NP+ + +W++R++AI A          A A++   E++         +TEL +  + +Q+NPKSY AW  R+W+++                     +  L KE+ LC +LLD+DERNFHCWNYRR  V +  G S  D+  F+T +I +NFSNYSA HHR+  L   LT           L  E+ +VQQA FTEPDDQ++W+Y+++L++ +L+                   + +V+ +  L E   E           +W V+TLA L  +L +     G     E  +K S  L+ER   +DPDH + Y+ +
Sbjct:    1 MHGRVKSVEREKEQQKTDAQRQEELSKVRMYHEVAGKVLEMKRQQLYE----------PSALPLTSHLLLLNPEFHVVWSYRRQAIDAL--------AAKAQDPPAEMQ------EMAKTELKLTLDALQRNPKSYSAWFQRKWIIDRG-------------------LGDLKKEIGLCDKLLDLDERNFHCWNYRRH-VCKLAGVSEEDQLAFTTQKIEQNFSNYSALHHRSISLPEPLTAD--------LLFDEIGLVQQAVFTEPDDQSAWFYYRWLLTSMLE------MVESSAEDAAGFLKSQVQWLDELLEMETEA----------KWVVVTLADLHYRLGAITDVNG----WEESKKRSVELYERAIELDPDHRRYYQEM 315          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: GAX94175.1 (geranylgeranyl transferase type-2 subunit alpha, putative [Pythium insidiosum])

HSP 1 Score: 174.9 bits (442), Expect = 5.400e-40
Identity = 124/381 (32.55%), Postives = 193/381 (50.66%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLV--ALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGLFERLGRMDPD 411
            MHGR K+  +     +++ ++     KV  Y ++    LALK +R                  L L++ LL +NP+ + +W +R+E + A  +++   +GA    T GE   A+ P    +TEL +  E +Q+NPKSY AW+ R+W+++                     +  L KE+ LC +LLD+DERNFHCWNYRR  V +  G S  +E  FST +I +NFSNYSA HHR+  L   LT           L+ E+ +VQQA FTEPDDQ++W+Y+++L++ +L+                   E     I  + E  E E+ AK       W ++TLA L  +LA++  ++         + +S  L+ERL ++DPD
Sbjct:    1 MHGRVKSVEREKEERKTDDDRREELTKVRMYHEVAGKVLALKAQRVLE------------AHILPLTSHLLLLNPEFHIVWGYRREILDA--LLQRHAQGA----TDGE---AISPEELAKTELKLTFEALQRNPKSYAAWYQRQWVIDKG-------------------LGDLKKEIGLCNKLLDLDERNFHCWNYRRH-VCRLAGVSQAEELAFSTLKIEQNFSNYSALHHRSITLPKPLTRD--------TLQDEIGLVQQAVFTEPDDQSAWFYYRWLLASMLE----------LLASNQETAEFLSSQIDWMTELVEMEQNAK-------WVLVTLADLHHRLATATHDDD-------AKTQSVQLYERLVKLDPD 308          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: CCA16035.1 (geranylgeranyl transferase type2 subunit alpha putat [Albugo laibachii Nc14])

HSP 1 Score: 172.6 bits (436), Expect = 2.700e-39
Identity = 125/388 (32.22%), Postives = 196/388 (50.52%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLA--SSQGEEGEEGRGEVLRKESRGLFERLG-RMDPDHAKRYE 417
            MHGR K+  +A    ++E ++    +KV  YK +V+  L+ ++E         +  + + AL L+  LL +N + + +W +R+E      ++ H LE   + +T   LE         + EL +  E +Q+NPKSY AW HR+W+L+                    LV  + KE+ LC +LLD+DERNFHCWNYRR+ V++  G  A +E +FST +I +NFSNYSA HHR+  L   LT        K  + +E+++VQQA FTEPDDQ+ W+Y+++LI   +                    +     I  + E    E  AK       W ++TLA L  +L   ++ G++ +E      R++ R L+ +L   +D DH   YE
Sbjct:    1 MHGRVKSVERAIDEKKTEDDRVEDLNKVRMYKDIVSKVLRLKKE---------SVYDAQVALPLTRHLLLLNQEFHIVWGYRRE------IISHILEKEESTDT-SNLELG-------KEELKLTFEALQRNPKSYAAWFHRQWVLD------------------KNLVENVQKEILLCEKLLDLDERNFHCWNYRRY-VAKKLGMGAEEELQFSTIKIEQNFSNYSALHHRSISLPVPLT--------KDIILEEINLVQQAVFTEPDDQSVWFYYRWLIQNAVDLENNETVSESCQLHSFIHSQ-----ITWVRELYVMEASAK-------WVIVTLADLYGRLCIYTTNGDDIQE-----TREKCRALYRKLSDHIDQDHKHYYE 321          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: OWZ18782.1 (Geranylgeranyl transferase type-2 subunit alpha [Phytophthora megakarya])

HSP 1 Score: 170.6 bits (431), Expect = 1.000e-38
Identity = 114/388 (29.38%), Postives = 190/388 (48.97%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGLFERLGRMDPDHAKRYENIV 420
            MHGR K+  +     +++ +++    KV  Y ++    L  +R+   +             L L++ LL +NP+ + +WN+R++AI A            A     E++         +TEL +  + +Q+NPKSY AW  R+W+++                     +  L KE+ LC +LL++DERNFHCWNYRR  V +  G S  D+  F+T +I +NFSNYSA HHR+  L   LT           + +E+ +VQQA FTEPDDQ++W+Y+++L++ +L+                   + +V+ +  L E   E           +W ++ LA L  ++    G   E G  E  +K+S  L+ R+  +DPDH + YE+++
Sbjct:    1 MHGRVKSVEREKEQQKTDEQRQEELSKVRMYHEVAGKVLDMKRQQVYE----------PSVLPLTSHLLLLNPEFHVVWNYRRQAIDAL--------AQKAENPEAEMQ------EMAKTELKLTLDALQRNPKSYSAWFQRKWIIDRG-------------------LGDLKKEIGLCDKLLNLDERNFHCWNYRRH-VGKLAGMSEDDQLGFTTQKIEQNFSNYSALHHRSISLPDPLTAD--------VVFEEIGLVQQAVFTEPDDQSAWFYYRWLVTSMLE------LVESSAEDTAGFLKSQVQWLDELQEMETEA----------KWVIVALADLHYRI----GTITEVGGWEQSKKQSVDLYHRVIDLDPDHRRYYEDMI 316          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: POM78813.1 (Geranylgeranyl transferase type-2 subunit alpha [Phytophthora palmivora var. palmivora])

HSP 1 Score: 168.3 bits (425), Expect = 5.100e-38
Identity = 115/388 (29.64%), Postives = 190/388 (48.97%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGLFERLGRMDPDHAKRYENIV 420
            MHGR K+  +     +++ +++    KV  Y ++    L+ +R+   +             L L++ LL +NP+ + +W++R++AI A            A     E++         +TEL +  + +Q+NPKSY AW  R+W+++                     +  L KE+ LC +LL++DERNFHCWNYRR+ V +  G S  D+  F+T +I +NFSNYSA HHR+  L   LT           L +E+ +VQQA FTEPDDQ++W+Y ++L++ +L+                   + +V+ +  L E   E           +W V+TLA L  ++      EG     E  +K S  L++R   +DPDH + YE+++
Sbjct:    1 MHGRVKSVEREKEQQKTDEQRQEELSKVRMYHEVATKVLEMKRQQVYE----------PSVLPLTSHLLLLNPEFHVVWSYRRQAIDAL--------AQKAENPETEMQ------EMAKTELKLTLDALQRNPKSYSAWFQRKWIIDRG-------------------LGDLKKEIGLCDKLLNLDERNFHCWNYRRY-VGKLAGMSDEDQLGFTTQKIEQNFSNYSALHHRSISLPDPLTAD--------VLFEEIGLVQQAVFTEPDDQSAWFYFRWLLTSMLE------LVESSADDAAGFLKSQVQWLNELLEMETEA----------KWVVVTLADLHYRIGKLTEVEG----WEKSKKLSVELYQRSIDLDPDHRRYYEDML 316          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: CCI41711.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 166.0 bits (419), Expect = 2.500e-37
Identity = 121/388 (31.19%), Postives = 192/388 (49.48%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLA--SSQGEEGEEGRGEVLRKESRGLFERL-GRMDPDHAKRYE 417
            MHGR K+  +A    ++E ++    +KV  YK +V+  L+ + E         +  + + AL L+  LL +N + + +W +R+ AI      + ++      + G E             EL +  E +Q+NPKSY AW HR+W+L+                    LV  + KE+ LC +LL++DERNFHCWNYRR+ V++  G    +E +FST +I +NFSNYSA HHR   L   LT        K  + +E+++VQQA FTEPDDQ+ W+Y+++LI   +  G                 +     I  + E  E E  AK       W ++TLA+L  +L   ++ G + ++      R +S+ L+ +L   +DP+H   YE
Sbjct:    1 MHGRVKSVERAIDEKKTENDRIEDLNKVKMYKDIVSKVLRMKNE---------SVYDAQVALPLTRHLLLLNQEFHIVWGYRR-AIILHMSKKEDITERSKMDLGKE-------------ELKLTFEALQRNPKSYAAWFHRQWVLDR------------------NLVENVQKEIHLCEKLLELDERNFHCWNYRRY-VARKIGMDREEELQFSTIKIEQNFSNYSALHHRTISLPTPLT--------KDIILEEINLVQQAVFTEPDDQSVWFYYRWLIQNAVDLGKNETTSESFDLHSFIQSQ-----IIWVQELYEMEASAK-------WVLVTLAALHDRLCILTTNGADAQD-----TRDKSQALYRKLCDHIDPNHKHYYE 321          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: POM58791.1 (Geranylgeranyl transferase type-2 subunit alpha [Phytophthora palmivora var. palmivora])

HSP 1 Score: 166.0 bits (419), Expect = 2.500e-37
Identity = 115/388 (29.64%), Postives = 190/388 (48.97%), Query Frame = 0
Query:   32 MHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGLFERLGRMDPDHAKRYENIV 420
            MHGR K+  +     +++ +++    KV  Y ++    L+ +R+   +             L L++ LL +NP+ + +W++R+ AI A            A     E++         +TEL +  + +Q+NPKSY AW  R+W+++                     +  L KE+ LC +LL++DERNFHCWNYRR+ V +  G S  D+  F+T +I +NFSNYSA HHR+  L   LT           L +E+ +VQQA FTEPDDQ++W+Y ++L++ +L+                   + +V+ +  L E   E           +W V+TLA L  ++    G+  E    E  +K S  L++R   +DPDH + YE+++
Sbjct:    1 MHGRVKSVEREKEQQKTDEQRQEELSKVRMYHEVATKVLEMKRQQVYE----------PSVLPLTSHLLLLNPEFHVVWSYRRLAIDAL--------AQKAENPEAEMQ------EMAKTELKLTLDALQRNPKSYSAWFQRKWIIDRG-------------------LGDLKKEIGLCDKLLNLDERNFHCWNYRRY-VGKLAGMSDEDQLGFTTQKIEQNFSNYSALHHRSISLPDPLTAD--------VLFEEIGLVQQAVFTEPDDQSAWFYFRWLLTSMLE------LVESSADDAAGFLKSQVQWLNELLEMETEA----------KWVVVTLADLHYRI----GKLTEVDGWEKSKKLSVELYQRSIDLDPDHRRYYEDML 316          
BLAST of NO15G01730 vs. NCBI_GenBank
Match: XP_002905896.1 (geranylgeranyl transferase type-2 subunit alpha, putative [Phytophthora infestans T30-4] >XP_002905897.1 geranylgeranyl transferase type-2 subunit alpha, putative [Phytophthora infestans T30-4] >EEY67248.1 geranylgeranyl transferase type-2 subunit alpha, putative [Phytophthora infestans T30-4] >EEY67249.1 geranylgeranyl transferase type-2 subunit alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 164.1 bits (414), Expect = 9.600e-37
Identity = 113/391 (28.90%), Postives = 190/391 (48.59%), Query Frame = 0
Query:   28 KRTIMHGRRKAENQAALLARSEAEKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLLRVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQTELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLVATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARIYKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPDDQTSWWYHQYLISLVLKEGGXXXXXXXXXXXXXXXXEGEVEIIRGLAEEGEEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGLFERLGRMDPDHAKRYENI 419
            ++  MHGR K+  +     +++A+++    KV  Y ++    L  +R+   +             L L++ LL +NP+ + +W++R++AI A   +  + E   A              +  +TEL +  + +Q+NPKSY AW  R+W+++                     +  L  E+ LC +LL++DERNFHCWNYRR  V +  G S  ++  F+T +I +NFSNYSA HHR+  L   L+           L  E+ +VQQA FTEPDDQ++W+Y+++L++ +++                   + +V+ +  L E   E           +W V+TLA L  +L+      G     E  +K S GL++R   +DPDH   YE++
Sbjct:    8 RQEAMHGRVKSVEREKEQHKTDAQRQEELSKVRMYHEVAGKVLDMKRQQLYE----------PSVLPLTSHLLLLNPEFHVVWSYRRQAIDA---LAQKAENPEAEML-----------TMAKTELKLTLDALQRNPKSYSAWFQRQWIIDRG-------------------LGDLKMEIGLCDKLLNLDERNFHCWNYRRH-VCKLAGVSKAEQLAFTTQKIEQNFSNYSALHHRSITLPEPLSAD--------VLFDEIGLVQQAVFTEPDDQSAWFYYRWLLTSMVE------LVESSAEDASGFLKSQVQWLNELLEMESEA----------KWVVVTLADLQFRLSVITDVSG----WEEAKKRSVGLYDRAIALDPDHRHYYEDM 326          
The following BLAST results are available for this feature:
BLAST of NO15G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22438.14.100e-11255.34geranylgeranyl transferase type-2 subunit alpha [N... [more]
CBN74500.11.100e-4031.29Rab geranylgeranyltransferase alpha [Ectocarpus si... [more]
XP_009536480.12.400e-4030.75hypothetical protein PHYSODRAFT_565126 [Phytophtho... [more]
GAX94175.15.400e-4032.55geranylgeranyl transferase type-2 subunit alpha, p... [more]
CCA16035.12.700e-3932.22geranylgeranyl transferase type2 subunit alpha put... [more]
OWZ18782.11.000e-3829.38Geranylgeranyl transferase type-2 subunit alpha [P... [more]
POM78813.15.100e-3829.64Geranylgeranyl transferase type-2 subunit alpha [P... [more]
CCI41711.12.500e-3731.19unnamed protein product [Albugo candida][more]
POM58791.12.500e-3729.64Geranylgeranyl transferase type-2 subunit alpha [P... [more]
XP_002905896.19.600e-3728.90geranylgeranyl transferase type-2 subunit alpha, p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL142nonsL142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001430NSK001430Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01730.1NO15G01730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554656gene_4723Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g94gene8022Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01730.1NO15G01730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01730 ID=NO15G01730|Name=NO15G01730|organism=Nannochloropsis oceanica|type=gene|length=3487bp
CGTGTTTTGAAAAGGCATAATTGACGTAGAGATTTCTCTCTACGTTCCTT
CTTACGACAAAATATGTTCTGTCGCTGTCAGTAATCGCCAGTCTGCCATT
CATTTCTCATTTCAGTATTTCTTGTTTTGAGTTCATTCACAATATATTGC
TTTCAACACGCCGGCACGACCGGCCTCTTCTCTTCCGCACACCATAACTC
TCGTCATCTTATTCACGTCGAAACAGATTTTTGTTCATACTCTTCACCTT
TTTCGCCGGCAACCCGGGAGCTGCGACCGGCTTGTAAGAGTACGCCACCA
CTGCAGCATTCCCCACGTTTTGACCCAACGGCAAGCTCCGGTCTCCGCTA
AAACGAAAATGAACCCCTGCCATAGTGCGACTCTCTTTAATTTCATATGA
GGCAGCGCTGAAGGAAGGGTAGGCGCGAATCTTCCCCGGAACTTTCTCTG
AGGTCAGTACAAAGGGCACCTCGTCTTTCCCAGCAATCGCCCTCAACACG
GTGGCGGCTGCCTCTGCAGTGGCAGTGTGCCCCTGGGGATATTCAGGGTG
GGGCGGTGTCATAATTTCACTCTCGAATGCCGGATCCGCCGGGAAGTCTG
TCACATTATTGCCAACCTGAATCGAAGTCACGGGCCGCCAGCTGTTGTAA
AAATATTTTGAGTCAAAAGCAGCAATGCGGGCGTCAGCCATCGCGGTGGC
CATGCAGGCGTAGGCCTTGACGCTTTCGGCGAGGGTGAAGTTTTCAGCCA
CTTGCTTGAGAACACCATACCAGGGCATCTCAATGTTTGCCCCGCTCCAG
AAGTACACAGTTTCGGTTTGGTCCGCAGAGCGTGAAGTGGAATTTTTCGT
GCCCACCTGCTTCACCTCTAGGTAACTCATTTTAAAGGCGAGCGAGTCCA
AGGCTGGCGGTGCAGCAACACGAAATTGATCGCCCTTCTCTAAATTAAAA
GGCTTGACCTGACCCCAGTGCGGCGTCAAGCCTGCCTTGAAGGCGGGAGG
AGTGGGGCGCCACTTGCCCACCTCCTCCACCCCTTTGTACGGAGGCGGGG
CGGGGCTAGAACCGTCCTTAGCGCGGTCATTTAGTAGCGCCCTAGTGAGG
GTGGCGCTTCGGTCTGTGGGCACCGCTGCTGCTGCTTGCTGGGCATACAA
CTCATTTACTCTATCAGTCACGTTGGGGAAGATAGAGAGGAGCACCGTTT
TGCCCGCGCTCGCAACTGCCGCGACTGCCGCCGCCTGGGTCTCAGGCATT
GCACCCTGGCCAATGCTGTCTCGGAAGGCCTGCCATTGTGCCGTGTGCAA
GAGAGCACCATAGCGGCAAGCCGTGTTGGGGTCGATCTTATTACCGCGAA
CCTGATCTTGCAGTACGTCGTTCCAGGCGGTCACCGGGTTGGCATTTGTC
GTAGTTAAGAACCAATGGAGCAGGAGGAGAAGGACCGAAATATATCGCAT
GGTTGGTCGATCTGTGTCACGGCGGTGAGGTGGGTGGGTCGGTGCAGTTG
GTCCAAATTAGAAGGTGTCAGTGCGTGGTGGAGGGGGGAGGTCAAAAAAG
AGGATCTTCCCCATTCGTCGGCCTCTTTTTGCGTGAAATTGAGGCAGAAC
GGCCACGTAAAATACCAGCAGCCTGATCAATAAGCACCTTTTGAATTTTC
TTGGACAAAAGCGCAAGGGAGTCACATGACGGTGGAACAAAATCATACCG
CCAGGAGTTCGAGCCAAGCCGACGGTTCGCAACACAGCCCTTCCGTCCAA
ACACGGACATGTCATCTTCCAAAGCTTATATTGGCCCGTCCAAGAGTCCT
CTCATTCCATTTGCGACATTTAAATATGCGGAAACCCCTTTGAAAGAGTG
TACACCGTTGACCAAGCCAAGCACCGAAGGTCCCAGCGATGACTCGAAGT
CCTTCCCAATCTCACTTCCCCATCCTGATTGCTTACATCCAAGCCCTCCC
ACACGTTCACGCACAGGCCAAGCGGACGATAATGCACGGCCGACGAAAGG
CAGAGAACCAGGCTGCGCTCTTGGCCCGAAGCGAGGCAGAAAAAGAAGCC
GCCAGGGACAAGGTCCATAAGTACAAGCAGCTTGTCGCCCTCGCCTTGAA
GCAACGACGTGAGGCGAATGATCAAAACCTCACTGTCACAACGAGAAAGG
AGTTGGAGGAGGCATTGGCCTTGTCGGCGCAGCTGTTGCGTGTAAATCCC
GACGTGTACACATTATGGAATCATCGCAAGGAAGCCATAGCCGCCAGTCA
AGTGGTGCGGCATGAGCTTGAAGGAGCATACGCGAGAGAAACGGGGGGAG
AATTGGAAAATGCCTTGCCACCAAACTCCTTTCTACAGACAGAGTTAAGC
ATGATAGCAGAGTGCATTCAAAAGAATCCGAAGTCCTACGGTGCATGGCA
TCACCGCCGCTGGCTTCTGGAGCATGCCTTTCCTTGTACTGCTTCCTCAC
CCTCTTGCTCCTCCGCTACTTCGCCTTCGCAACTTGTTGCCACACTTGAT
AAAGAGGTAGCCTTGTGTGCGCAACTCTTGGACGTGGACGAACGAAATTT
TCACTGTTGGAACTATCGACGGTGGGTGGTGAGTCAGCACCCTGGGCGGA
GTGCCACGGACGAATTTGAGTTTTCAACGGCCAGGATCTATAAGAACTTC
AGgtcagtgacagaaggggggaagtaaagaatgtgtgatttaacgcaatc
tagtggactgcatgggaaaatacatttttattgattcgtaacatggaaac
ccgatacattttcctctctctccctctctccctccttccctagCAACTAC
TCGGCCTTCCATCACCGCGCGGCCTACCTTTCTGGTCACTTGACGGAATC
TGGACAAACTTTAAACCCTAAAGTGTTCCTCAGGCAAGAACTAGACATGG
TACAGCAAGCGTTTTTCACGGAGCCGGACGATCAAACCTCCTGGTGGTAC
CACCAGTACTTAATCTCTCTCGTCCTGAAGGAGGGAGGGAGGGAGGGAGG
GGAGGAGGGAGGGAAGGAGTTTGTCCGGGAGGTTTTGGAGGGGGAGGTGG
AGATTATTAGGGGGCTGGCGGAGGAGGGGGAGGAGGAAAGAGGGGCAAAG
GGGAAGGGAGGAGGGTATCGGTGGGCGGTGCTGACGTTGGCGTCCTTGTT
GAGGCAGTTGGCATCGTCTCAGGGGGAGGAGGGGGAGGAAGGGAGAGGGG
AGGTATTGCGGAAAGAGAGTAGAGGCCTGTTTGAACGATTGGGGAGAATG
GATCCGGACCATGCGAAGAGGTATGAGAATATTGTGGTGAGCTCATTTTG
AGGAGAGGAGGGAGGGGAGGGACGGAAGGATGCGGAGGGCAGAAAGATTT
TGGCTGGTTCTTCTCAGGAGGATGCAAAGAGTAGAGGCTGGGTCATTGTA
CATGGTGGATGGATCTTAGGCGGCAAGTTAGCAGTCGCTAGAAGGAAGGA
ATTTAAGCAAACTGTTGGTTCACCTCCAGAGGCAAGG
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protein sequence of NO15G01730.1

>NO15G01730.1-protein ID=NO15G01730.1-protein|Name=NO15G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=424bp
MTRSPSQSHFPILIAYIQALPHVHAQAKRTIMHGRRKAENQAALLARSEA
EKEAARDKVHKYKQLVALALKQRREANDQNLTVTTRKELEEALALSAQLL
RVNPDVYTLWNHRKEAIAASQVVRHELEGAYARETGGELENALPPNSFLQ
TELSMIAECIQKNPKSYGAWHHRRWLLEHAFPCTASSPSCSSATSPSQLV
ATLDKEVALCAQLLDVDERNFHCWNYRRWVVSQHPGRSATDEFEFSTARI
YKNFSNYSAFHHRAAYLSGHLTESGQTLNPKVFLRQELDMVQQAFFTEPD
DQTSWWYHQYLISLVLKEGGREGGEEGGKEFVREVLEGEVEIIRGLAEEG
EEERGAKGKGGGYRWAVLTLASLLRQLASSQGEEGEEGRGEVLRKESRGL
FERLGRMDPDHAKRYENIVVSSF*
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Synonyms
Publications