NO15G01580, NO15G01580 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01580 vs. NCBI_GenBank
Match: EWM22464.1 (SGF29 tudor-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 478.4 bits (1230), Expect = 2.900e-131 Identity = 299/366 (81.69%), Postives = 315/366 (86.07%), Query Frame = 0
Query: 136 NRPGLPCFRKLEPRVLLKYLEHHGLTAKADATTEELAMLVSRHFEREPVDEDVVLHSFFMSGMQATNTLGKFE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARLSCQLVEDSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMGPLEVMVKFEDDEDETGRTPHRRVPARHVLKLSQVGRFEAANGLGREGT--GDGXXXXXXXXXXXGSIKDYKIMISHALQKLPNSKGTLKEIFKIIENEFRDELHWKIEGGGGDGGKKAPIWKQQVRKLLTNPRSGFMFINAG 499
+R G FRKLEPRVLLKYLEHHGLTAK DA+ +ELA LV+RHF REPVDE+VVLHSFFMSGMQATN LGKFE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VAARL Q++EDSTAGWILAR+I+Y PERDTYQVRDEDDHANVQ LPS NVI LHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGG+GPLEVMVKFEDDEDETGRTPHRRVPARHVLKLSQVGRFEAANG+GR+G GDG ++DYKIMISHALQKLPNSKGTLKEIFKIIEN+FRDEL WK+EG GKK PIWK QVRKLL NPRSGFMFINAG
Sbjct: 111 SRLGSQTFRKLEPRVLLKYLEHHGLTAKPDASVDELAALVARHFSREPVDEEVVLHSFFMSGMQATNVLGKFEKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAKMDEEVAARLPNQMMEDSTAGWILARVIQYAPERDTYQVRDEDDHANVQVLPSANVICLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGLGPLEVMVKFEDDEDETGRTPHRRVPARHVLKLSQVGRFEAANGMGRDGEDYGDGGGRK--------GMRDYKIMISHALQKLPNSKGTLKEIFKIIENDFRDELQWKMEG----DGKKGPIWKSQVRKLLVNPRSGFMFINAG 464
BLAST of NO15G01580 vs. NCBI_GenBank
Match: CBJ48948.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 126.3 bits (316), Expect = 2.800e-25 Identity = 97/250 (38.80%), Postives = 126/250 (50.40%), Query Frame = 0
Query: 275 DSTAGWILARIIKYVPERDTYQVRDEDDH--ANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMGPLEVMVKFEDDEDETGRTPHRRVPARHVLKLSQ------------------------VGRFEAANGLGREGTGDGXXXXXXXXXXXGSIKDYKIMISHALQKLPNSKGTLKEIFKIIENEFRDELHWKIEGGGGDGGKKAPIWKQQVRKLLTNPRSGFMFINAG 499
+ WILAR+IKYVPE Y+++D+DD + T P + VIRL E++ VQK + VLAVFPDTTSFY + +VPK A G +E VKF DD D+TGRTP R +PAR+V+ L + XXXXXXXXXXX Y MI AL KLP +G L + IE F + L+W+ E ++ P WK VR+ L + MF +AG
Sbjct: 383 EEPGAWILARVIKYVPETHQYELKDDDDKEGIGILTAPRSLVIRL-EDSTKGVQKGERVLAVFPDTTSFYLGTIHRVPKPAPGAERRIE--VKFNDDADDTGRTPGRPLPARYVVPLPEGFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAEMIRTALMKLPGRQGNLATVCAYIEEHFHERLNWRSE----SSLRRTPAWKASVRRTLAHHP---MFCHAG 622
BLAST of NO15G01580 vs. NCBI_GenBank
Match: GAX23440.1 (SAGA-associated factor 29 [Fistulifera solaris]) HSP 1 Score: 124.0 bits (310), Expect = 1.400e-24 Identity = 84/268 (31.34%), Postives = 126/268 (47.01%), Query Frame = 0
Query: 143 FRKLEPRVLLKYLEHHGLTAKADATTEELAMLVSRHFEREPVDEDVVLHSFFMSGMQATNTLGKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARLSCQLVEDSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMG-PL--EVMVKFEDDEDETGRTPHRRVPARHVLKLSQVGRFEAANGLGREGTG 408
FRK+ LL Y++H G+ + DA ELA+ V+RHFE+ +DE+ + F Q T VAA+++ D WILA + ++ P+ +TY V+DEDD + + LP T+V+RL + K+ +A+FP+TTSFYR++V+K P G P+ E++VKFEDDED GRTP+RRVPAR+V+ + +E A+ + TG
Sbjct: 35 FRKVSGLTLLNYIDHQGVKIRTDAPQGELAVAVARHFEQMEIDEEECIGGFLERLEQPTGITDYIR----------------------------KTAFFDGHAPTLEVRKRKRLAARPGEQVAAKVT---RTDENGSWILASVQRFYPDSETYDVQDEDDTSKLIRLPWTHVMRLSNGTEGNFTKDKDCMAIFPETTSFYRSKVSKNPVWVLDRNGIPMVKEIIVKFEDDEDSQGRTPNRRVPARYVIPIPADYFYEEADDVDLSLTG 271
BLAST of NO15G01580 vs. NCBI_GenBank
Match: GAX12695.1 (SAGA-associated factor 29 [Fistulifera solaris]) HSP 1 Score: 124.0 bits (310), Expect = 1.400e-24 Identity = 82/260 (31.54%), Postives = 123/260 (47.31%), Query Frame = 0
Query: 143 FRKLEPRVLLKYLEHHGLTAKADATTEELAMLVSRHFEREPVDEDVVLHSFFMSGMQATNTLGKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARLSCQLVEDSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMG-PL--EVMVKFEDDEDETGRTPHRRVPARHVLKLSQVGRFEAAN 400
FRK+ LL Y++H G+ + DA ELA+ V+RHFE+ +DE+ + F Q T VAA+++ D WILA + ++ P+ +TY V+DEDD + + LP T+V+RL + K+ +A+FP+TTSFYR++V+K P G P+ E++VKFEDDED GRTP+RRVPAR+V+ + +E A+
Sbjct: 33 FRKVSGLTLLNYIDHQGVKIRTDAPQGELAVAVARHFEQMEIDEEECIGGFLERLEQPTGITDYMR----------------------------KTAFFDGHAPSLEVRKRKRLAARPGEQVAAKVT---RTDENGSWILASVQRFYPDSETYDVQDEDDTSKLIRLPWTHVMRLSNGTEGNFVKDKDCMAIFPETTSFYRSKVSKNPVWVMDRNGIPMVKEIIVKFEDDEDSQGRTPNRRVPARYVIPIPADYFYEEAD 261
BLAST of NO15G01580 vs. NCBI_GenBank
Match: XP_002182411.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46312.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 122.1 bits (305), Expect = 5.200e-24 Identity = 81/253 (32.02%), Postives = 120/253 (47.43%), Query Frame = 0
Query: 143 FRKLEPRVLLKYLEHHGLTAKADATTEELAMLVSRHFEREPVDEDVVLHSF---FMSGMQATNTLGKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARLSCQLVEDSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMGP---LEVMVKFEDDEDETGRTPHRRVPARHVLKL 390
FRKL LL Y++HHG+ +A+A ELA+ V+RHFE VDE+ + F G AT VAA+++ D WILA + ++ + +TY V+DEDD + + LP ++V+RL +K++ +A+FP+TTSFYRA+++K P +G E++VKFEDD+D GRTPHRRVPAR+V+ +
Sbjct: 37 FRKLAGLTLLSYIDHHGVAVRAEAPPSELAVAVARHFEAMEVDEEECIGGFLERLEKGPGATE-----------------------------YARQTAFFDGRALALPARKRKRSKLAAGPGEQVAAKVT---RTDENGSWILASVQRFYTDTETYDVQDEDDTSKLIRLPWSHVMRLSTGAEGCFKKDNDCMAIFPETTSFYRAKISKDPIWKVDRLGEPTVKEIIVKFEDDDDAQGRTPHRRVPARYVIPI 257
BLAST of NO15G01580 vs. NCBI_GenBank
Match: EJK48328.1 (hypothetical protein THAOC_32887 [Thalassiosira oceanica]) HSP 1 Score: 110.9 bits (276), Expect = 1.200e-20 Identity = 57/131 (43.51%), Postives = 84/131 (64.12%), Query Frame = 0
Query: 275 DSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVP--------KRAQGGMGPL------EVMVKFEDDEDETGRTPHRRVPARHVLKLSQ 392
+ WILA +++Y PE +TY V+DEDD + + LP +V+RL + + K+ V+A+FP+TTSFYRA ++K P + GG+G EV++KFEDDE+E G+TPHRRVP+R+V+ L Q
Sbjct: 161 EENGSWILAYVLRYYPESETYDVQDEDDTSKLIRLPWNHVMRLSTGSEGWLNKSQQVMAIFPETTSFYRAFISKQPVWTSGTAADESAGGVGNAHKPRVKEVILKFEDDENEEGKTPHRRVPSRYVIPLPQ 291
BLAST of NO15G01580 vs. NCBI_GenBank
Match: OEU23335.1 (hypothetical protein FRACYDRAFT_178807 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 110.2 bits (274), Expect = 2.000e-20 Identity = 75/248 (30.24%), Postives = 117/248 (47.18%), Query Frame = 0
Query: 143 FRKLEPRVLLKYLEHHGLTAKADATTEELAMLVSRHFEREPVDEDVVLHSFFMSGMQATNTLGKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARLSCQLVEDSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVP--KRAQGGMGPLEVMVKFEDDEDE-TGRTPHRRVPARHVL 388
FRKL L+ Y++HHG+ + +A ELA+ V+RHFE+ VDE+ V+ F + ++ VAA+++ D WILA + ++ + +TY V+DEDD + + LP ++V+RL K+ +A+FP+TTSFY+++V K P K G E++V+FEDDED TG+TP RRVP+R+V+
Sbjct: 75 FRKLAGLTLVSYIDHHGVKVRPEAPPSELAVAVARHFEQMEVDEEDVIGGFLERLEEGPTVATEYS------------------------------RKTQRASTRIVNRKRTKWAARPGEQVAAKVT---RTDENGSWILASVQRFYVDTETYDVQDEDDTSKLIRLPWSHVMRLSTGAEGCFVKSADCMAIFPETTSFYKSKVAKSPVWKLDHGVPCVKEIVVQFEDDEDTLTGKTPRRRVPSRYVI 289
BLAST of NO15G01580 vs. NCBI_GenBank
Match: CBJ26159.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 99.0 bits (245), Expect = 4.700e-17 Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 275 DSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMGPLEVMVKFEDDED-ETGRTPHRRVPARHVL 388
+ WILA II+Y+ R Y+V+D DD +P NVIRL E K D VLAVFPDTTSFYR ++K P R G + E++V+FEDD D +TG+TPHRR+ ++ VL
Sbjct: 144 NENGSWILAEIIRYLAGRACYEVKDADDPLKQIEVPDNNVIRLREGG-QGFAKGDDVLAVFPDTTSFYRGTISKQPVRKAGLVA--ELVVQFEDDADQDTGKTPHRRINSKLVL 254
BLAST of NO15G01580 vs. NCBI_GenBank
Match: CBJ26523.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.0 bits (232), Expect = 1.500e-15 Identity = 97/305 (31.80%), Postives = 127/305 (41.64%), Query Frame = 0
Query: 277 TAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMGPLEVMVKFEDDEDETGRTPHRRVPARHVLKLSQVGR-----FEAANGLG------------------------------------REGTG---------------------------------DGXXXXXXXXXXXGSIKDYKIMISHALQKLPNSKGTLKEIFKIIENEFRDELHWKIEGGGGDGGKKAPIWKQQVRKLL----------TNPRSGFMFINA 498
+ WILAR++++ ++ DEDD ++V LP + V L E+ D+ K+D VLAVFPDTT FY A V K R G L +V FEDDED G +RR+P HV+ G + A G+G R G XXXXXXXXXXX Y MI+HAL K+ N KG +I IIE +F + L+WK+E +K P+WK VRK+L T P G +F A
Sbjct: 217 SGAWILARVVQH-KGYGKVELHDEDDASHVFELPISQVRHL-EDLSSDLGKHDKVLAVFPDTTIFYCATVAKDSPRMDGNTKVL--VVYFEDDEDANGGHQYRRIPVEHVMIEDDGGHANRHGYAAGAGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTSPRVRNEYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYADMIAHALGKVENGKGAFTQICNIIERQFSEYLNWKLE----SDVRKTPVWKSSVRKILFSNSRFQHHSTTPELGHVFTMA 513
BLAST of NO15G01580 vs. NCBI_GenBank
Match: CBJ32510.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.5 bits (223), Expect = 1.700e-14 Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 0
Query: 274 EDSTAGWILARIIKYVPERDTYQVRDEDDHANVQTLPSTNVIRLHEENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGMG-PLEVMVKFEDDEDETGRTPHRRVPARHVLKL 390
ED A W+L R++ ++ E Y+V DEDD++ T+ VI L E + K D VLAV+ DTTSFY A + +P R +G +G V+F DD DE G TPHR VP H++KL
Sbjct: 152 EDPEADWVLGRVLSWMHETGQYEVMDEDDNSKKLTMDEHQVIPL-EGRTERLSKGDDVLAVYVDTTSFYHATIA-IPPRGRGQIGNGGTAHVQFVDDADEHGVTPHRAVPIIHIIKL 266 The following BLAST results are available for this feature:
BLAST of NO15G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01580 ID=NO15G01580|Name=NO15G01580|organism=Nannochloropsis oceanica|type=gene|length=1587bpback to top protein sequence of NO15G01580.1 >NO15G01580.1-protein ID=NO15G01580.1-protein|Name=NO15G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=529bpback to top Synonyms
Publications
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