NO15G01520, NO15G01520 (gene) Nannochloropsis oceanica

Overview
NameNO15G01520
Unique NameNO15G01520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1319
Alignment locationchr15:430812..432130 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:430812..432130 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01520.2NO15G01520.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G01520.1NO15G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|440767gene_4696Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01520.2NO15G01520.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G01520.1NO15G01520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01520 ID=NO15G01520|Name=NO15G01520|organism=Nannochloropsis oceanica|type=gene|length=1319bp
AACAGTCTGTCACATGCCCTCGTTGCCCTCTCATCAATACCGCCGTTCTC
TTCTCTGCATCGTCTTATTTATCTTGACTAAGTCAACTACATGTGATCCC
GCCTTGCGCGGCTTTGTCCGAGAAGGAGTAGTTCATGATCAGCAGCAGCG
GCCAGAGTGGAAGGAGGGCCACGCTTCGTCTGCTTCGTCTAAGAACCTTG
AATCTGGCACCATTATCGCCGTGGATGGATATGCTACTGGCCGAAATGCT
CTGCATTTTAGCACTCAAAATTTTACTTCTGCCTCTGAACTTGCCCATGA
GCACGAATCTGACGGCACCACGGACGCGACTGCAGACGCCATAGTAAGGG
AGCTGCAGCAAACTAGCGTCCAGGCTTACATGAATGACAACCAAAGCGGG
ACTCGCTTAGAAGGTCTTGGAACTACGGGTATCACTGGACCTACGACGCA
TTTACCCCAAATCGCTCACTCTCCTGTTACTGGCGGTACGGGGGGGGTCC
TCTTCGGTGGTGGCGCTCAGTCGGGTACTCCAGGAGTTGCTGGTGGTACA
TTCCCGAATCCTGgtacgtttgaagggaacttgcgttaaggtggtttaaa
cactcttgatctcccttgcctgacccaagctttgcacgttcatctgtaca
gCTGGCGAGTCAGGGGTATCTACAGGTGGCACCGGAGTTGGCGGTTCCCC
GACCGGCTTGGGTACCACGGCGGGAACTATTGGAGGAGCCCCTGTGGGAG
AGGGACTCGTGGGACCTTCGTAAGTAATATTTGTGTCCCTGAATGTATCC
TCTCTTTCTGGCCATGCTGAGAGGGCGTAACGTGTGAAATGCTCAGCGTA
TATTCACTTTCCTTGTTTACATTTCCGAGGGGTCTGCCTGCACCCATCGC
TACGCCTGGGGGCGTTGGATCCGTCGGCGGACTTGGAGGTCGTATTTAGA
GTGCTGGCAGGTGATGATTGTGGTGCGGATCAAGATGGTTGAAGCATAGA
CGGACAAGAGACAGCTTGGGGCAAAGTCTCAAAATGTCCGCCGACCTGTA
GATCACCATCAGGTATCAAGGCTCCAAAGACGTGGCGATGATATCGACTT
AAAATGTACAAATTCAGCATCTTAAAATTTGATATTGTCAGTGATGCAGA
TTTTGGGTACCTACTTTTCAGCTACCTCTTCCAGTCACAATCCAGCACTT
TGGCACACAAAAGGAAAATGCTACTGAGATAGGATGGCAGTAGAAGTGCG
CGCTTTCTTATTCATCGAGGGGCTATCATAAAAGTCAAGTAAAAGAATTG
AATTTGTCTGGTCGCGAGT
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protein sequence of NO15G01520.2

>NO15G01520.2-protein ID=NO15G01520.2-protein|Name=NO15G01520.2|organism=Nannochloropsis oceanica|type=polypeptide|length=224bp
MPSLPSHQYRRSLLCIVLFILTKSTTCDPALRGFVREGVVHDQQQRPEWK
EGHASSASSKNLESGTIIAVDGYATGRNALHFSTQNFTSASELAHEHESD
GTTDATADAIVRELQQTSVQAYMNDNQSGTRLEGLGTTGITGPTTHLPQI
AHSPVTGGTGGVLFGGGAQSGTPGVAGGTFPNPAGESGVSTGGTGVGGSP
TGLGTTAGTIGGAPVGEGLVGPS*
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protein sequence of NO15G01520.1

>NO15G01520.1-protein ID=NO15G01520.1-protein|Name=NO15G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=246bp
MPSLPSHQYRRSLLCIVLFILTKSTTCDPALRGFVREGVVHDQQQRPEWK
EGHASSASSKNLESGTIIAVDGYATGRNALHFSTQNFTSASELAHEHESD
GTTDATADAIVRELQQTSVQAYMNDNQSGTRLEGLGTTGITGPTTHLPQI
AHSPVTGGTGGVLFGGGAQSGTPGVAGGTFPNPAGESGVSTGGTGVGGSP
TGLGTTAGTIGGAPVGEGLVGPSGLPAPIATPGGVGSVGGLGGRI*
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Synonyms
Publications