NO15G01520.1, NO15G01520.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G01520.1
Unique NameNO15G01520.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1121
Alignment locationchr15:430812..432130 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:430812..432130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G01520.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01520NO15G01520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G01520.1NO15G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G01520.1.cds1NO15G01520.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01520.1.cds2NO15G01520.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01520.1.cds3NO15G01520.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G01520.1 ID=NO15G01520.1|Name=NO15G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=1121bp
AACAGTCTGTCACATGCCCTCGTTGCCCTCTCATCAATACCGCCGTTCTC
TTCTCTGCATCGTCTTATTTATCTTGACTAAGTCAACTACATGTGATCCC
GCCTTGCGCGGCTTTGTCCGAGAAGGAGTAGTTCATGATCAGCAGCAGCG
GCCAGAGTGGAAGGAGGGCCACGCTTCGTCTGCTTCGTCTAAGAACCTTG
AATCTGGCACCATTATCGCCGTGGATGGATATGCTACTGGCCGAAATGCT
CTGCATTTTAGCACTCAAAATTTTACTTCTGCCTCTGAACTTGCCCATGA
GCACGAATCTGACGGCACCACGGACGCGACTGCAGACGCCATAGTAAGGG
AGCTGCAGCAAACTAGCGTCCAGGCTTACATGAATGACAACCAAAGCGGG
ACTCGCTTAGAAGGTCTTGGAACTACGGGTATCACTGGACCTACGACGCA
TTTACCCCAAATCGCTCACTCTCCTGTTACTGGCGGTACGGGGGGGGTCC
TCTTCGGTGGTGGCGCTCAGTCGGGTACTCCAGGAGTTGCTGGTGGTACA
TTCCCGAATCCTGCTGGCGAGTCAGGGGTATCTACAGGTGGCACCGGAGT
TGGCGGTTCCCCGACCGGCTTGGGTACCACGGCGGGAACTATTGGAGGAG
CCCCTGTGGGAGAGGGACTCGTGGGACCTTCGGGTCTGCCTGCACCCATC
GCTACGCCTGGGGGCGTTGGATCCGTCGGCGGACTTGGAGGTCGTATTTA
GAGTGCTGGCAGGTGATGATTGTGGTGCGGATCAAGATGGTTGAAGCATA
GACGGACAAGAGACAGCTTGGGGCAAAGTCTCAAAATGTCCGCCGACCTG
TAGATCACCATCAGGTATCAAGGCTCCAAAGACGTGGCGATGATATCGAC
TTAAAATGTACAAATTCAGCATCTTAAAATTTGATATTGTCAGTGATGCA
GATTTTGGGTACCTACTTTTCAGCTACCTCTTCCAGTCACAATCCAGCAC
TTTGGCACACAAAAGGAAAATGCTACTGAGATAGGATGGCAGTAGAAGTG
CGCGCTTTCTTATTCATCGAGGGGCTATCATAAAAGTCAAGTAAAAGAAT
TGAATTTGTCTGGTCGCGAGT
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protein sequence of NO15G01520.1

>NO15G01520.1-protein ID=NO15G01520.1-protein|Name=NO15G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=246bp
MPSLPSHQYRRSLLCIVLFILTKSTTCDPALRGFVREGVVHDQQQRPEWK
EGHASSASSKNLESGTIIAVDGYATGRNALHFSTQNFTSASELAHEHESD
GTTDATADAIVRELQQTSVQAYMNDNQSGTRLEGLGTTGITGPTTHLPQI
AHSPVTGGTGGVLFGGGAQSGTPGVAGGTFPNPAGESGVSTGGTGVGGSP
TGLGTTAGTIGGAPVGEGLVGPSGLPAPIATPGGVGSVGGLGGRI*
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mRNA from alignment at chr15:430812..432130-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G01520.1 ID=NO15G01520.1|Name=NO15G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=1319bp|location=Sequence derived from alignment at chr15:430812..432130- (Nannochloropsis oceanica)
AACAGTCTGTCACATGCCCTCGTTGCCCTCTCATCAATACCGCCGTTCTC
TTCTCTGCATCGTCTTATTTATCTTGACTAAGTCAACTACATGTGATCCC
GCCTTGCGCGGCTTTGTCCGAGAAGGAGTAGTTCATGATCAGCAGCAGCG
GCCAGAGTGGAAGGAGGGCCACGCTTCGTCTGCTTCGTCTAAGAACCTTG
AATCTGGCACCATTATCGCCGTGGATGGATATGCTACTGGCCGAAATGCT
CTGCATTTTAGCACTCAAAATTTTACTTCTGCCTCTGAACTTGCCCATGA
GCACGAATCTGACGGCACCACGGACGCGACTGCAGACGCCATAGTAAGGG
AGCTGCAGCAAACTAGCGTCCAGGCTTACATGAATGACAACCAAAGCGGG
ACTCGCTTAGAAGGTCTTGGAACTACGGGTATCACTGGACCTACGACGCA
TTTACCCCAAATCGCTCACTCTCCTGTTACTGGCGGTACGGGGGGGGTCC
TCTTCGGTGGTGGCGCTCAGTCGGGTACTCCAGGAGTTGCTGGTGGTACA
TTCCCGAATCCTGGTACGTTTGAAGGGAACTTGCGTTAAGGTGGTTTAAA
CACTCTTGATCTCCCTTGCCTGACCCAAGCTTTGCACGTTCATCTGTACA
GCTGGCGAGTCAGGGGTATCTACAGGTGGCACCGGAGTTGGCGGTTCCCC
GACCGGCTTGGGTACCACGGCGGGAACTATTGGAGGAGCCCCTGTGGGAG
AGGGACTCGTGGGACCTTCGTAAGTAATATTTGTGTCCCTGAATGTATCC
TCTCTTTCTGGCCATGCTGAGAGGGCGTAACGTGTGAAATGCTCAGCGTA
TATTCACTTTCCTTGTTTACATTTCCGAGGGGTCTGCCTGCACCCATCGC
TACGCCTGGGGGCGTTGGATCCGTCGGCGGACTTGGAGGTCGTATTTAGA
GTGCTGGCAGGTGATGATTGTGGTGCGGATCAAGATGGTTGAAGCATAGA
CGGACAAGAGACAGCTTGGGGCAAAGTCTCAAAATGTCCGCCGACCTGTA
GATCACCATCAGGTATCAAGGCTCCAAAGACGTGGCGATGATATCGACTT
AAAATGTACAAATTCAGCATCTTAAAATTTGATATTGTCAGTGATGCAGA
TTTTGGGTACCTACTTTTCAGCTACCTCTTCCAGTCACAATCCAGCACTT
TGGCACACAAAAGGAAAATGCTACTGAGATAGGATGGCAGTAGAAGTGCG
CGCTTTCTTATTCATCGAGGGGCTATCATAAAAGTCAAGTAAAAGAATTG
AATTTGTCTGGTCGCGAGT
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Coding sequence (CDS) from alignment at chr15:430812..432130-

>NO15G01520.1 ID=NO15G01520.1|Name=NO15G01520.1|organism=Nannochloropsis oceanica|type=CDS|length=738bp|location=Sequence derived from alignment at chr15:430812..432130- (Nannochloropsis oceanica)
ATGCCCTCGTTGCCCTCTCATCAATACCGCCGTTCTCTTCTCTGCATCGT
CTTATTTATCTTGACTAAGTCAACTACATGTGATCCCGCCTTGCGCGGCT
TTGTCCGAGAAGGAGTAGTTCATGATCAGCAGCAGCGGCCAGAGTGGAAG
GAGGGCCACGCTTCGTCTGCTTCGTCTAAGAACCTTGAATCTGGCACCAT
TATCGCCGTGGATGGATATGCTACTGGCCGAAATGCTCTGCATTTTAGCA
CTCAAAATTTTACTTCTGCCTCTGAACTTGCCCATGAGCACGAATCTGAC
GGCACCACGGACGCGACTGCAGACGCCATAGTAAGGGAGCTGCAGCAAAC
TAGCGTCCAGGCTTACATGAATGACAACCAAAGCGGGACTCGCTTAGAAG
GTCTTGGAACTACGGGTATCACTGGACCTACGACGCATTTACCCCAAATC
GCTCACTCTCCTGTTACTGGCGGTACGGGGGGGGTCCTCTTCGGTGGTGG
CGCTCAGTCGGGTACTCCAGGAGTTGCTGGTGGTACATTCCCGAATCCTG
CTGGCGAGTCAGGGGTATCTACAGGTGGCACCGGAGTTGGCGGTTCCCCG
ACCGGCTTGGGTACCACGGCGGGAACTATTGGAGGAGCCCCTGTGGGAGA
GGGACTCGTGGGACCTTCGGGTCTGCCTGCACCCATCGCTACGCCTGGGG
GCGTTGGATCCGTCGGCGGACTTGGAGGTCGTATTTAG
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Synonyms
Publications