NO15G01260, NO15G01260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01260 vs. NCBI_GenBank
Match: EWM22473.1 (Thioesterase type II, NRPS/PKS/S-FAS [Nannochloropsis gaditana]) HSP 1 Score: 457.2 bits (1175), Expect = 3.700e-125 Identity = 210/281 (74.73%), Postives = 244/281 (86.83%), Query Frame = 0 Query: 2 ATTLEVPVVSDEVVKAWLPMYKPIDKPRLRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYNADVRDDWFESITDFLTGEGF 283 +T L + V SDE +KAWLPMYKP+DK RLRILCFPSAGSAENIYTG AVR +R PNKL++WA DA+AE+LA+QYPGREQRRKEPF+K+CQAMAAA+ PV+Q KL++EDVPYV++AHSCG+WIAYE+L L++ MPMP MFFVSCMASPDIAASAKPWK N+EM+V+QLQAECRLWDVNE+VFRPDVWP FEPLLRADF+LFDQY E F F+FPIH Y A+ DRKIS+KMVEGW+ FT SDFD++L+QGNHLFVYNAD RD WFESITD L EGF Sbjct: 48 STALTMTVSSDE-IKAWLPMYKPLDKVRLRILCFPSAGSAENIYTGPAVRGTRREPNKLVSWAKDARAEILAIQYPGREQRRKEPFIKTCQAMAAAILPVVQEKLKEEDVPYVLIAHSCGNWIAYEMLCLIKTMAMPMPSMFFVSCMASPDIAASAKPWKPNREMNVSQLQAECRLWDVNEIVFRPDVWPNFEPLLRADFTLFDQYKHNIEAFHKFDFPIHGYCASKDRKISKKMVEGWRNFTRSDFDMELIQGNHLFVYNADARDSWFESITDLLVAEGF 327
BLAST of NO15G01260 vs. NCBI_GenBank
Match: PRW20885.1 (Monothiol glutaredoxin- chloroplastic [Chlorella sorokiniana]) HSP 1 Score: 241.9 bits (616), Expect = 2.400e-60 Identity = 119/272 (43.75%), Postives = 169/272 (62.13%), Query Frame = 0 Query: 8 PVVSDEVVKAWLP----MYKPIDKPRLRILCFPSAGSAENIYT--GLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYNADVRDDWFESI 274 P E + W P D PRLR+LCFP+AG+AE++YT G VR R P+ L+ W AE LAVQ PGR R +EP +C+ +AAAL PV+ +L D PYV+VAHS G+W+AYELL+ ++A +PMP F+S MASPDI +PW+ + + Q + ECR WDVNE+VF +W T++PL+RADF+LFD+Y G PF FP+ ++ + DR+I + +V+GW RFTT F++ ++G+HL+ + + W I Sbjct: 379 PPPDAETFRKWFPGLALSRTACDNPRLRVLCFPNAGNAEDMYTSEGTGVR---RAPSPLLDWCRANVAECLAVQPPGRNTRSREPPFTACRDLAAALLPVVASRLL--DAPYVVVAHSVGTWVAYELLRAVQAAGLPMPTKVFLSAMASPDIPWDQRPWRQQRGLDEEQFKEECRGWDVNELVFSAALWGTYQPLMRADFTLFDEYEHTHGGQPPFAFPLITFWGSRDRRIKQHLVQGWSRFTTGAFELHEMEGHHLWPLDKASKAVWLGQI 645
BLAST of NO15G01260 vs. NCBI_GenBank
Match: XP_005643908.1 (alpha/beta-hydrolase [Coccomyxa subellipsoidea C-169] >EIE19364.1 alpha/beta-hydrolase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 241.1 bits (614), Expect = 4.100e-60 Identity = 114/272 (41.91%), Postives = 165/272 (60.66%), Query Frame = 0 Query: 10 VSDEVVKAWLP----MYKPIDKPRLRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYNADVRDDWFESITDFL 278 V D + W P PR R++CFP+AG+AE++YT + + + L+ W + AE LAVQ PGR R KEP + +C+ MAAAL PV+ PKL D PY+++ HS G+W A+E L L ++ +PMP+ F+S MA+P+I +PW+ +S A + ECR WDVNEV+F P +WPT+ L+RADF+LFD+Y F G PF FPI +F +DR+I +MV W RFTT F+ ++G+HL+ + + W +I + L Sbjct: 21 VDDAEFRKWFPGLLLSRTSCPHPRWRVVCFPNAGNAEDMYTSEGTGAR-KVSSPLLEWCRENDAECLAVQPPGRNMRMKEPCITTCRHMAAALLPVLAPKLL--DTPYIVIGHSVGTWNAFEFLMLAQSEGVPMPRHVFLSAMAAPNIPTEQRPWRRQHSLSEADFKEECRAWDVNEVLFTPALWPTYHSLMRADFTLFDEYEFTHTGASPFAFPITSFFGTSDRRIKEEMVVRWARFTTGGFECLPIEGHHLWPLVKESKVLWLGAIVERL 289
BLAST of NO15G01260 vs. NCBI_GenBank
Match: XP_011400243.1 (Gramicidin S biosynthesis protein GrsT [Auxenochlorella protothecoides] >KFM27276.1 Gramicidin S biosynthesis protein GrsT [Auxenochlorella protothecoides]) HSP 1 Score: 228.0 bits (580), Expect = 3.600e-56 Identity = 116/294 (39.46%), Postives = 162/294 (55.10%), Query Frame = 0 Query: 8 PVVSDEVVKAWLP----MYKPIDKPRLRILCFPSAGSAENIYT--GLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMS----------------VAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYNADVRDDWFESITDFLTG 280 P EV + W P +KP L +LCFPSAG++E+ YT G VR R P+ L+ W AE LAVQ PGR R K F S ++A L PV+ +L PYVIV HS G+W+A+ELL R +P+P +S + +PDI +PW+ + + +++Q ECR W V+E++F P +WPT++P++RADF LFD+Y F G PF+FPIH Y+ D +I + MVEGWQRFT+ F + GNHL++ + + W SI L G Sbjct: 38 PPPEAEVFRTWFPGLPLSRTASEKPALLVLCFPSAGTSEDTYTSEGTGVR---RAPSPLLDWCRANNAECLAVQPPGRNLRSKHAFADSAASLAKELLPVVASRL--ASTPYVIVGHSLGTWLAFELLSAARDAGLPLPLHASLSALCAPDIPFDQRPWRQQRTLGEEDFKARGSMVLPLCVPSRVQEECRGWSVSEILFTPALWPTYQPIMRADFRLFDEYEFTRAGEAPFDFPIHAYWGTGDLRIKQWMVEGWQRFTSGSFACTPIDGNHLWIQDKAAKQAWLASIAKDLEG 326
BLAST of NO15G01260 vs. NCBI_GenBank
Match: CEM25340.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 226.5 bits (576), Expect = 1.000e-55 Identity = 115/263 (43.73%), Postives = 157/263 (59.70%), Query Frame = 0 Query: 26 DKPRLRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGRE-QRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRAR------------DMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRF--TTSDFDVDLVQGNHLFVYNADVRDDWFESI 274 + PR R+LC SAGSAE IYT ++ PN L+ W +D + E+LA Q PGR R KEP + S Q A L+ V+ P + V Y IV HS G+WIA+ELL L+R + +P+PK F SCM +PD A +PW+ NK+++ Q + EC WDVN+ VF D+W + PLLR DF++FD YTF +G PF+ PI ++A DRKIS +MV WQRF +S F + + G+HLFVY++ R W + I Sbjct: 17 ENPRFRVLCLHSAGSAETIYTNKG-SPRRPYPNPLLQWCIDNEVELLAAQLPGRPGPRAKEPRITSAQEAAKRLYEVMTPHF-ADGVSYAIVGHSVGTWIAFELLCLIREKLKQQETTSTTTPQVPLPKHLFFSCMVAPDWPADKRPWRQNKDLNEEQFKEECGHWDVNKEVF--DMWDVYGPLLRDDFTIFDCYTFTHDGCQPFDIPITAWYAKRDRKISEEMVSAWQRFVKNSSKFTLSSIDGHHLFVYDSGARTAWMDQI 275
BLAST of NO15G01260 vs. NCBI_GenBank
Match: PNW78637.1 (hypothetical protein CHLRE_09g388900v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 218.8 bits (556), Expect = 2.200e-53 Identity = 105/263 (39.92%), Postives = 152/263 (57.79%), Query Frame = 0 Query: 28 PRLRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTFASEGFCPF----------------NFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYN-ADVRDDWFESI 274 PR+R+L F S+G+AE+++T + R + L+ W E+LAVQ PGR R +EPF+ S Q AA L PV+ P L + +VPY +V+HS G W+A+ELL+ RA +P P + +S M +PD+ + +PW+ + + A Q E R WDVNEVVF PD+W +EP+LRADF LFD+Y G P + PI ++ DR+++ ++EGWQRFTT F + V GNHL+ N D + W + Sbjct: 242 PRMRVLAFHSSGNAEDMWTSEGTGAR-RAKSPLLEWCRGRDVELLAVQLPGRAARLREPFLDSAQDFAAQLLPVLAPLLAQRNVPYALVSHSLGCWLAFELLRAARAARLPAPAAWCLSAMPAPDLPEAQRPWRQQRSLGTADFQEEVRGWDVNEVVFSPDMWQMYEPILRADFKLFDEYQMLPSGSSPVAVGRTGGALHDVAVFDDLPITAFYGTRDRRVTPALMEGWQRFTTGPFQLLAVPGNHLWPLNDRDSKAAWLACV 503
BLAST of NO15G01260 vs. NCBI_GenBank
Match: XP_005773272.1 (hypothetical protein EMIHUDRAFT_241727 [Emiliania huxleyi CCMP1516] >EOD20843.1 hypothetical protein EMIHUDRAFT_241727 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 214.9 bits (546), Expect = 3.200e-52 Identity = 111/277 (40.07%), Postives = 157/277 (56.68%), Query Frame = 0 Query: 10 VSDEVVKAWLPMYK-PIDKPRLRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVW---PTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYNADVRDDWFESITDFLTGEGF 283 V D K W P +K P P+ R++CF +AGSAE+ YTG +R N + + E+LAV+ PGRE RR EP ++ A ALFPV+ PKL E VPYV+V HS G+W+ +E LKLL AR + +P+ VS +P + A+ +PW++NK M + ECR W VVF +W P +E L+R DF+LFD Y +A P+ Y+A +D+ + V W+ T DF ++ V GNHLF Y DVR+ W + + + L +GF Sbjct: 70 VDDATFKKWFPKWKPPAATPKFRLVCFHNAGSAESNYTGKGLR--MPNDNPFVVACNERGGELLAVELPGRESRRAEPRYRTLSVAAEALFPVLAPKL-NESVPYVVVGHSMGTWMLFETLKLLMARGVRLPEQVVVSSFPAPSLPAAKRPWRANKGMDDDAFKEECRTW---SVVFSAGMWTKGPNYEALMRDDFTLFDAYEYAPAVAPQLPMPVSAYYARDDKNVKESHVATWKDMTCKDFRLEEVPGNHLFFYQYDVRNKWMDRVVESLP-DGF 339
BLAST of NO15G01260 vs. NCBI_GenBank
Match: XP_005782941.1 (hypothetical protein EMIHUDRAFT_232873 [Emiliania huxleyi CCMP1516] >EOD30512.1 hypothetical protein EMIHUDRAFT_232873 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 214.9 bits (546), Expect = 3.200e-52 Identity = 111/277 (40.07%), Postives = 157/277 (56.68%), Query Frame = 0 Query: 10 VSDEVVKAWLPMYK-PIDKPRLRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVW---PTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYNADVRDDWFESITDFLTGEGF 283 V D K W P +K P P+ R++CF +AGSAE+ YTG +R N + + E+LAV+ PGRE RR EP ++ A ALFPV+ PKL E VPYV+V HS G+W+ +E LKLL AR + +P+ VS +P + A+ +PW++NK M + ECR W VVF +W P +E L+R DF+LFD Y +A P+ Y+A +D+ + V W+ T DF ++ V GNHLF Y DVR+ W + + + L +GF Sbjct: 70 VDDATFKKWFPKWKPPAATPKFRLVCFHNAGSAESNYTGKGLR--MPNDNPFVVACNERGGELLAVELPGRESRRAEPRYRTLSVAAEALFPVLAPKL-NESVPYVVVGHSMGTWMLFETLKLLMARGVRLPEQVVVSSFPAPSLPAAKRPWRANKGMDDDAFKEECRTW---SVVFSAGMWTKGPNYEALMRDDFTLFDAYEYAPAVAPQLPMPVSAYYARDDKNVKESHVATWKDMTCKDFRLEEVPGNHLFFYQYDVRNKWMDRVVESLP-DGF 339
BLAST of NO15G01260 vs. NCBI_GenBank
Match: XP_003074702.1 (Thioesterase [Ostreococcus tauri] >CAL50552.1 Thioesterase [Ostreococcus tauri] >OUS42341.1 thioesterase [Ostreococcus tauri]) HSP 1 Score: 213.0 bits (541), Expect = 1.200e-51 Identity = 100/247 (40.49%), Postives = 150/247 (60.73%), Query Frame = 0 Query: 27 KPRLRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTFASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQGNHLFVYNADVRDDWFESI 274 KPR+R+LCFP+AG+ E+++T + R + L+ W + EVLAVQYPGR R+ EP+ + L PV+ PKL ++ P+VI+ HS GSW+A+E ++L+R+R M MP+ F+S PDI +PW N + + ECR WDVNE+VF P +W + L+RADF LFD+Y +A G F +P+ ++ +DR I+R+M W+ TT +F++ + G+HLF D + W E I Sbjct: 76 KPRMRVLCFPNAGNQEDMFTSEGTGPR-RQSSALLEWCKSNECEVLAVQYPGRANRKSEPYAFDIADITVPLLPVVGPKL--QECPFVIIGHSVGSWVAFEFMQLMRSRGMRMPEHVFLSAFPFPDIPHRDRPWHVNVLLDEDAFKEECRRWDVNELVFGP-LWEVYHDLMRADFHLFDKYDYAHSGKENFAWPLTMFYGESDRMITREMCAFWETHTTGEFELVNIPGHHLFPLQKDQKAMWLEKI 318
BLAST of NO15G01260 vs. NCBI_GenBank
Match: XP_013906311.1 (short-chain dehydrogenase/reductase SDR [Monoraphidium neglectum] >KIZ07292.1 short-chain dehydrogenase/reductase SDR [Monoraphidium neglectum]) HSP 1 Score: 211.8 bits (538), Expect = 2.700e-51 Identity = 115/289 (39.79%), Postives = 160/289 (55.36%), Query Frame = 0 Query: 15 VKAWLPMYKPIDKPR---LRILCFPSAGSAENIYTGLAVREKQRTPNKLMAWAVDAQAEVLAVQYPGREQRRKEPFVKSCQAMAAALFPVIQPKLRKEDVPYVIVAHSCGSWIAYELLKLLRARDMPMPKMFFVSCMASPDIAASAKPWKSNKEMSVAQLQAECRLWDVNEVVFRPDVWPTFEPLLRADFSLFDQYTF-----------------ASEGFCPFNFPIHCYFAANDRKISRKMVEGWQRFTTSDFDVDLVQG-NHLFV-YNADVRDDWFESITDFLTGEG 282 V+ W P + K R +L FP++GSAE++Y+ + R P+ L+ W + A + AVQ PGR R +EP + A+AAAL PV P L Y +V HS G+W AYE L+L R+R +PMP F+S M +PDI +PW+ ++ + + ECR WD+NEVVF PD+WPTFEPLLRADF LFD+Y + G PF FP+ ++ DR+I +MV+GW RFT F V ++G NHL+ N + +W E I + G G Sbjct: 342 VRRWFPALRSHQKLRNAHTIVLAFPNSGSAEDLYSSEGTGAR-RAPSPLLDWCQTSGAVLTAVQPPGRGLRAREPPLPDLAALAAALLPVAAPALLAAG-RYFVVGHSVGAWAAYEFLQLARSRGLPMPAGAFLSAMPAPDIPEEERPWRRQALLTDEEFKDECRQWDINEVVFSPDLWPTFEPLLRADFRLFDEYHHRHPXXXXXPPSLGWSVPEAAGAPPFAFPVTAFWGDEDRRIGERMVQGWARFTRGPFAVVRLRGANHLWPGNNRAAKREWLERIVAGMQGTG 628 The following BLAST results are available for this feature:
BLAST of NO15G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01260 ID=NO15G01260|Name=NO15G01260|organism=Nannochloropsis oceanica|type=gene|length=1288bpback to top protein sequence of NO15G01260.1 >NO15G01260.1-protein ID=NO15G01260.1-protein|Name=NO15G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bpback to top Synonyms
Publications
|