NO15G01160, NO15G01160 (gene) Nannochloropsis oceanica

Overview
NameNO15G01160
Unique NameNO15G01160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3488
Alignment locationchr15:330397..333884 +

Link to JBrowse

Properties
Property NameValue
DescriptionCalcium binding protein 39
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:330397..333884 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR013878Mo25
Homology
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: EWM22461.1 (calcium binding protein 39 [Nannochloropsis gaditana])

HSP 1 Score: 523.5 bits (1347), Expect = 6.300e-145
Identity = 299/416 (71.88%), Postives = 320/416 (76.92%), Query Frame = 0 
Query:   32 MPTGGSSFLQSLTKRKKSPETLVKLAVACLQELPASEDESWTCPTAEGVKPLTGALGGLSLDEAVNAKQPPKHVDSDDLSVSGQSISSSTASSGSDAA----------VSRRPSFFLSAFGKKESSSNSADPGSAAPHSQSSLGSSGESGAADTTTK------SGRPGSLLVSKFFSDSSRKPAPLSPHGSGLSQSASLGQTGAEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            MPTGGSSFL SLTKRKKSPE LVKLAVACL ELPA ED SWTCP              L+  E      P K    D+L+ S  SISSS A S  DA+                FFLSAFGKKE+ S+  D GSA P   SS GSS +  AAD +T       S RP  L VSKFFSDSSRKP  LSP  S  SQ  S+GQ+G E  +VMERLAKRL+QMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNH GFADPYIAD HFSI+EQLI+GYGHPEVALNCGSMLREAARHEKVARR+LFSPH+W FFDT+VHLPNFDVASDSFATLRDLLTKHK VAA+FLE+EY+ VF KY+SLLASDNYVTRRMSLKMLGEILLDRSNFNVM
Sbjct:    1 MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGVXXXXXXXXXXXXLNRGE----PGPSKQQKQDELTSSRHSISSS-APSNPDASXXXXXXXXXXXXXXXXFFLSAFGKKEAHSH--DSGSAPP-PHSSAGSSRDGSAADASTSGKVRGISIRPTGLSVSKFFSDSSRKPPILSPQESNWSQ-GSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 407
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: EWM22460.1 (calcium binding protein 39 [Nannochloropsis gaditana])

HSP 1 Score: 475.7 bits (1223), Expect = 1.500e-130
Identity = 274/410 (66.83%), Postives = 295/410 (71.95%), Query Frame = 0 
Query:   32 MPTGGSSFLQSLTKRKKSPETLVKLAVACLQELPASEDESWTCPTAEGVKPLTGALGGLSLDEAVNAKQPPKHVDSDDLSVSGQSISSSTASSGSDAA----------VSRRPSFFLSAFGKKESSSNSADPGSAAPHSQSSLGSSGESGAADTTTKSGRPGSLLVSKFFSDSSRKPAPLSPHGSGLSQSASLGQTGAEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            MPTGGSSFL SLTKRKKSPE LVKLAVACL ELPA ED SWTCP              L+  E      P K    D+L+ S  SISSS A S  DA+                FFLSAFGKKE+ S+  D GSA P   SS GS  +      +T                               S   S+GQ+G E  +VMERLAKRL+QMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNH GFADPYIAD HFSI+EQLI+GYGHPEVALNCGSMLREAARHEKVARR+LFSPH+W FFDT+VHLPNFDVASDSFATLRDLLTKHK VAA+FLE+EY+ VF KY+SLLASDNYVTRRMSLKMLGEILLDRSNFNVM
Sbjct:    1 MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGXXXXXXXXXXXXXLNRGE----PGPSKQQKQDELTSSRHSISSS-APSNPDASXXXXXXXXXXXXXXXXFFLSAFGKKEAHSH--DSGSAPP-PHSSAGSXRDXXXXXXST-------------------------------SGKGSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 371
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: XP_024575753.1 (Conserved protein Mo25 [Plasmopara halstedii] >CEG39384.1 Conserved protein Mo25 [Plasmopara halstedii])

HSP 1 Score: 252.3 bits (643), Expect = 2.700e-63
Identity = 120/213 (56.34%), Postives = 159/213 (74.65%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            A+DGT +E + KRL++MK++LYGDGE+E   +KCV LAE +I  GL+P L+ R   LPFEARK  AQ++NN+ R +  GF      +    I+  L+ GY +PEVALNCG+MLRE  RHE +A ++L+S  +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA FL  ++D+VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   98 AKDGTPVEVITKRLSEMKVLLYGDGEQEAKLEKCVQLAELLIASGLIPKLISRLDKLPFEARKQFAQVYNNLMRRDLAGFVS--YVEHKPEILSALVAGYENPEVALNCGTMLRELIRHEVLAGKILYSADLWRFFDVYVHLPNFEVGSDAFATFKDLFTRHKTLAATFLTSKFDVVFTKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 308
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: XP_008900333.1 (hypothetical protein PPTG_07731 [Phytophthora parasitica INRA-310] >ETI53985.1 hypothetical protein F443_03143 [Phytophthora parasitica P1569] >ETK93839.1 hypothetical protein L915_03029 [Phytophthora parasitica] >ETM00338.1 hypothetical protein L917_02923 [Phytophthora parasitica] >ETM53533.1 hypothetical protein L914_02993 [Phytophthora parasitica] >ETN14049.1 hypothetical protein PPTG_07731 [Phytophthora parasitica INRA-310] >ETO82668.1 hypothetical protein F444_03210 [Phytophthora parasitica P1976] >ETP51784.1 hypothetical protein F442_03122 [Phytophthora parasitica P10297] >KUF91853.1 hypothetical protein AM588_10003499 [Phytophthora nicotianae])

HSP 1 Score: 248.8 bits (634), Expect = 3.000e-62
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            ++DGT +E + KRL++MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R +  GF      D+   I+  L+ GY + EVALNCG+MLRE+ RHE +A ++L+SP +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA F    +D+VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   31 SKDGTAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS--YVDRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 241
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: XP_008900335.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI53986.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK93840.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM00339.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM53534.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN14050.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO82669.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP51785.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 248.8 bits (634), Expect = 3.000e-62
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            ++DGT +E + KRL++MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R +  GF      D+   I+  L+ GY + EVALNCG+MLRE+ RHE +A ++L+SP +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA F    +D+VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   31 SKDGTAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS--YVDRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 241
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: XP_008900334.1 (hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >XP_008900338.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETI53989.1 hypothetical protein, variant 4 [Phytophthora parasitica P1569] >ETI53990.1 hypothetical protein, variant 5 [Phytophthora parasitica P1569] >ETK93843.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETK93844.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETM00342.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM00343.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETM53537.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM53538.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETN14053.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETN14054.1 hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >ETO82672.1 hypothetical protein, variant 4 [Phytophthora parasitica P1976] >ETO82673.1 hypothetical protein, variant 5 [Phytophthora parasitica P1976] >ETP51788.1 hypothetical protein, variant 4 [Phytophthora parasitica P10297] >ETP51789.1 hypothetical protein, variant 5 [Phytophthora parasitica P10297])

HSP 1 Score: 248.8 bits (634), Expect = 3.000e-62
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            ++DGT +E + KRL++MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R +  GF      D+   I+  L+ GY + EVALNCG+MLRE+ RHE +A ++L+SP +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA F    +D+VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   31 SKDGTAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS--YVDRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 241
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: ETL47233.1 (hypothetical protein L916_02998 [Phytophthora parasitica] >ETP23788.1 hypothetical protein F441_03127 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 248.8 bits (634), Expect = 3.000e-62
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            ++DGT +E + KRL++MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R +  GF      D+   I+  L+ GY + EVALNCG+MLRE+ RHE +A ++L+SP +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA F    +D+VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   31 SKDGTAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS--YVDRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 241
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: ETL47234.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETP23789.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 248.8 bits (634), Expect = 3.000e-62
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            ++DGT +E + KRL++MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R +  GF      D+   I+  L+ GY + EVALNCG+MLRE+ RHE +A ++L+SP +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA F    +D+VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   31 SKDGTAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS--YVDRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 241
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: ETL47237.1 (hypothetical protein, variant 4 [Phytophthora parasitica] >ETL47238.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETP23792.1 hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >ETP23793.1 hypothetical protein, variant 5 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 248.8 bits (634), Expect = 3.000e-62
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            ++DGT +E + KRL++MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R +  GF      D+   I+  L+ GY + EVALNCG+MLRE+ RHE +A ++L+SP +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA F    +D+VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   31 SKDGTAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS--YVDRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 241
[Close]
BLAST of NO15G01160 vs. NCBI_GenBank
Match: XP_002901285.1 (calcium-binding protein, putative [Phytophthora infestans T30-4] >EEY59271.1 calcium-binding protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 248.8 bits (634), Expect = 3.000e-62
Identity = 117/213 (54.93%), Postives = 159/213 (74.65%), Query Frame = 0 
Query:  219 AEDGTVMERLAKRLAQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFADPYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHIWAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYRSLLASDNYVTRRMSLKMLGEILLDRSNFNVM 432
            ++DGT +E + KRL+++KL+LYGDGE+E   +KC  LAE +I  GL+P L+ R   LPFEARK  AQ++NN+ R +  GF      ++   I+  L+ GY + EVALNCG+MLRE+ RHE +A ++L+SP +W FFD YVHLPNF+V SD+FAT +DL T+HK +AA FL   +++VF+KY  LL S+NYVTRR SLK+LGEILLDRSNF++M
Sbjct:   31 SKDGTSVEEITKRLSEIKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLITRLDKLPFEARKQFAQVYNNLMRRDLSGFVS--YVERKPEILSALVAGYENSEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDEYVHLPNFEVGSDAFATFKDLFTRHKTLAATFLTSNFEVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIM 241
The following BLAST results are available for this feature:
BLAST of NO15G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22461.16.300e-14571.88calcium binding protein 39 [Nannochloropsis gadita... [more]
EWM22460.11.500e-13066.83calcium binding protein 39 [Nannochloropsis gadita... [more]
XP_024575753.12.700e-6356.34Conserved protein Mo25 [Plasmopara halstedii] >CEG... [more]
XP_008900333.13.000e-6255.40hypothetical protein PPTG_07731 [Phytophthora para... [more]
XP_008900335.13.000e-6255.40hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008900334.13.000e-6255.40hypothetical protein, variant 5 [Phytophthora para... [more]
ETL47233.13.000e-6255.40hypothetical protein L916_02998 [Phytophthora para... [more]
ETL47234.13.000e-6255.40hypothetical protein, variant 1 [Phytophthora para... [more]
ETL47237.13.000e-6255.40hypothetical protein, variant 4 [Phytophthora para... [more]
XP_002901285.13.000e-6254.93calcium-binding protein, putative [Phytophthora in... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001491NSK001491Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01160.1NO15G01160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G01160.2NO15G01160.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587383gene_4658Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g34gene7964Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01160.1NO15G01160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G01160.2NO15G01160.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01160 ID=NO15G01160|Name=NO15G01160|organism=Nannochloropsis oceanica|type=gene|length=3488bp
CCCCAACCCTGCTTCTATAACGATCAGGCAGCCCGTCCAATGCATCACCC
ACACAGCGTACATAACCACGACCACACAAATATAAAGAGGCAATTAAGCA
ACCAGCAGCAAGGCAATCTCTCGACGACAGCCATGCCAACCGGCGGCTCC
AGTTTCCTGCAGAGCTTGACGAAGCGCAAGAAGTCACCCGAGACGCTCGT
CAAACTGGCAGTAGCATGCCTGCAAGAATTACCCGCCTCGGAGGACGAGA
GTTGGACTTGTCCCACGGCCGAGGGAGTTAAGCCACTCACTGGGGCTTTG
GGAGGGCTCAGCCTCGACGAGGCGGTAAACGCCAAGCAGCCGCCAAAACA
TGTGGACAGCGACGACCTAAGCGTTTCGGGGCAGTCCATCTCGTCATCCA
CTGCCTCGAGTGGCAGCGACGCGGCCGTGTCTCGGCGGCCCAGCTTTTTC
TTGAGCGCTTTTGGCAAGAAGGAGTCCTCTTCTAATTCGGCAGACCCTGG
GTCGGCGGCGCCACACTCGCAATCCAGCCTGGGCTCCAGTGGGGAAAGCG
GGGCGGCCGACACAACAACCAAATCTGGGCGGCCGGGTTCCCTTTTGGTG
AGCAAGTTCTTCTCGGACTCAAGCCGGAAGCCTGCACCCCTGAGCCCGCA
TGGGTCGGGGCTATCGCAATCGGCGAGCCTGGGTCAGACGGGTGCGGAGG
ACGGCACGGTGATGGAGCGGCTGGCAAAGCGGCTGGCGCAGATGAAGCTG
GTGCTGTACGGGGACGGCGAGAAGGAGGTAGACAAAGACAAGTGTGTGGA
CCTGGCCGAAAATATTATCAAAGAAGGGCTCATGCCTTTGCTGCTGGACC
GATTCACGAATCTACCGTTCGAGGCCCGCAAGGACGCGGCCCAGATTTTT
AACAACATCGCCCGCCACAACCACGGAGGCTTCGCTGACCCCTACATCGC
CGACCAGCACTTTTCAATCATGGAACAGCTCATCAATgtacgcaggcatc
tgattggataggttcaaagggagacctgtataggttcatcgtgcttacat
ctcatctctcttctatctctccacagGGCTATGGCCACCCCGAGGTGGCT
CTGAACTGTGGGTCGATGCTGCGGGAGGCGGCCCGGCATGAAAAGGTGGC
ACGGCGGGTTCTGTTCTCGCCACACATCTGGGCATTTTTTGATACGTACG
TGCACCTGCCAAACTTCGACGTGGCCTCGGACTCGTTCGCCACGCTGCGC
GACCTACTGACCAAACACAAGGCCGTGGCAGCCGACTTCCTAGAGAAGGA
GTACGACCTCGTCTTCAGCAAATATCGCAGCCTGCTCGCCTCCGACAACT
ACGTCACTCGCCGCATGTCCCTCAAGATGCTGGGCGAGATCCTCCTCGAT
CGCTCGAATTTCAACGTCATGTAAGTTGTTTGTTATCGTGTTTTTTGGTA
CTTCAACTCAACTGCACTAGGTACTTGATTACCATCACTCGATCATCGAC
ATGAACTAGACCGGAGGCGTTGACAGTCTTGATTTTGGCGTCAGGGAGGT
TGCTGTTGGAGCAGCAATTAAAGCTACATAATTCACACAGACACTACGTG
CAGACAGAGGCATGACTTCTGGGAGCCGATGCCGATTGTCTCACCACGAC
TCTCAATCTCCCTCTCCCTGTACTTCAGGATGCGATATATCTCGTCGAAG
GAGAATCTGAAGACGATCATGAATCTGCTGCGCGACAAGAGCGCATCCAT
CCAGTTCGAAGCCTTCCACGTGTTCAAGGTGTTTGTGGCCAACCCCAAAA
AGCCTCCAGAGATAGTCAAGATCCTTGTCACGAATCGGGACAAGCTCGTC
AGCTACCTGACCCACTTCCACACTGACAAGGACGACGACCAGTTTCGCGA
GGAAAAGGCTCTACTTGTCAATACGCTCGCCAAGCTTGAGTACGAAGAGC
CCCCCAAGTAGAAGGACAGCGGGACAAAGAGGAAGAGCGAGCGCGACAAA
AAGCAGGGTTGCGGACGAGAGGTGTCGCCACACAGTAGCGACTCAAAGCA
AGGTCAACGTCAGGATTTTGTAGGACCAAGAAAGGAAAAAGAAATGTCTT
TGAGCGGAATATGTATCTCATTTAATTTGACGAGCTAGGGCGCGGTGGGG
TGTCCACTCAAGCGAGTGAAAATAACACCCAACCTCACGGCTCTGCTTTG
CCTACGAAAAATACATCGTCTTTTCTTTTGTTTCTGCCGGTCACTGCACT
TCCTGTAATAGATGCTGCTGTATTTGTCGTTGGAGATCTGTGCCGTTGCG
TACGTATAGGCTCGTGATTGCGCCGAAGCGTGTGCTGTGGGTCAAGGTAA
CCCGGAGCTCGTGGTCTAAGAAGGCCGTCTCTACAAAGGTCCCGTTGGGG
TCGAACGCGTCGAAGGGCACCACCCGCTGCACGGCCCGGATGAGTGCATC
TGGGTTACGGGGGGCACGATTCATGCTCATATCGTGCTCCACCTCCCCCA
TTTCTAATAAGCCTCGGCTGTTGACCTCGTAGCTGCTGCGGACGACCAAG
GCCCCCGCCAAGCCAGTATCCCCTTCCTCGCTCGCCGTGCACTCCCATTT
AACTGTATTGATGATGCACCCTTTCGTCACGTTTGGAATTAGTATTTGTT
GAAAATCACTCAGCACCATCTGCGTGGCGGCCATCGGTGCAGGGCCTCCT
AAGGCTGCCGCGGCCGCCCCTGCGGCCCAATCCTCCTCCTCAGCGGGACC
CAAGAGATCCAGGAAATTGTCCTCGTCCTCCTCCTCTCTTTCATCCTCAG
CAAGCAGGCTGCGCGCCTCTGCCACTTTACGCCGCACTGTCCAGGAATTG
TATATGTTCAACCAACTGCCTTGCAGTAGCAAATTCATAAAGGGCAAGGT
TTGAGGGGGCACGTACTTCTCCTTGAGCTGGCCCACGACAAAGTCAATGC
GCTGGGCGATGGATTCTTCCCTCCCTTCTCTGACATCCTCCGGCATGGTG
ACCAGAGTCAAAAGCTCCTCCCGGTGCTTGATGCTGGACGAAAAGGCGGA
GCTGGTGGGCGCGATAGCAAAGGCGGGGTCCGTGGTGGTGGATGCTGCTA
GTACTTGGCACTTCCAGAGTCTGGGAATAAGAAAGGCAGACGATCTACGG
CAAATTCCTGGCAGCCCAACAATTAAGAGCATTCCCTTCCTAGCTTTGCT
GCCAGCCCGGCAACGCATGCTTGGCAATCGACCCATCAAAGGCGCTATGT
ATGTAAGTGCGTGCGTAGGGATGCATGAGAAGGGGTAACCATGGGTGACT
TCAACGATTAGAGAGGCGGCTCTGGAGTATCTTTGCGTCCAGCCAGAGGC
ACAGGTCACGGCCGGGCTCACACTGCGATTTTAAGATGGGTCTTCCATGT
GTTTCTCTCAGTAAGTGTTGACAATCAGAGTTAGCTGTGTGTCGCTTTGC
GTGCAAGCAACAAAACCAGTCAAGCAAACCTCCCACAA
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protein sequence of NO15G01160.1

>NO15G01160.1-protein ID=NO15G01160.1-protein|Name=NO15G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp
MHHPHSVHNHDHTNIKRQLSNQQQGNLSTTAMPTGGSSFLQSLTKRKKSP
ETLVKLAVACLQELPASEDESWTCPTAEGVKPLTGALGGLSLDEAVNAKQ
PPKHVDSDDLSVSGQSISSSTASSGSDAAVSRRPSFFLSAFGKKESSSNS
ADPGSAAPHSQSSLGSSGESGAADTTTKSGRPGSLLVSKFFSDSSRKPAP
LSPHGSGLSQSASLGQTGAEDGTVMERLAKRLAQMKLVLYGDGEKEVDKD
KCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFAD
PYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHI
WAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYR
SLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKTIMNLLRD
KSASIQFEAFHVFKVFVANPKKPPEIVKILVTNRDKLVSYLTHFHTDKDD
DQFREEKALLVNTLAKLEYEEPPK*
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protein sequence of NO15G01160.2

>NO15G01160.2-protein ID=NO15G01160.2-protein|Name=NO15G01160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MHHPHSVHNHDHTNIKRQLSNQQQGNLSTTAMPTGGSSFLQSLTKRKKSP
ETLVKLAVACLQELPASEDESWTCPTAEGVKPLTGALGGLSLDEAVNAKQ
PPKHVDSDDLSVSGQSISSSTASSGSDAAVSRRPSFFLSAFGKKESSSNS
ADPGSAAPHSQSSLGSSGESGAADTTTKSGRPGSLLVSKFFSDSSRKPAP
LSPHGSGLSQSASLGQTGAEDGTVMERLAKRLAQMKLVLYGDGEKEVDKD
KCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHGGFAD
PYIADQHFSIMEQLINGYGHPEVALNCGSMLREAARHEKVARRVLFSPHI
WAFFDTYVHLPNFDVASDSFATLRDLLTKHKAVAADFLEKEYDLVFSKYR
SLLASDNYVTRRMSLKMLGEILLDRSNFNVM*
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