NO15G01070, NO15G01070 (gene) Nannochloropsis oceanica

Overview
NameNO15G01070
Unique NameNO15G01070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1761
Alignment locationchr15:312380..314140 -

Link to JBrowse

Properties
Property NameValue
Description30s ribosomal protein s1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:312380..314140 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR003029Rbsml_prot_S1_RNA-bd_dom
IPR022967S1_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Homology
BLAST of NO15G01070 vs. NCBI_GenBank
Match: EWM22454.1 (30s ribosomal protein s1 [Nannochloropsis gaditana])

HSP 1 Score: 596.3 bits (1536), Expect = 8.000e-167
Identity = 306/420 (72.86%), Postives = 351/420 (83.57%), Query Frame = 0
Query:    3 RRPAAWALACCVLAIDCAALSSHAAFVSPLPSFACGRGRGRAHTAVVAEKP--LSTPSIYSAAAGQEEYDTQSPTTEAAVVVVEVRGGKTREEERKSKHFDFLKEVAQNKKQARANKAKFRDQRDEYLEEMRKAFKLMQIKEREESGFKWVKRPRRDRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAARTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLPRVDYSWYMGGFEVAGSEDAPGRGFVEEMDFQPSYEDGQGLQARGRGKHAMERMQEWNFDDESGRNGGMRRRGEGEKEVVHNLDA 421
            RR AA   ACC++A+ C A SSHAAF+SPL  F CGR RGR HTAVVAE+P    TPSIYSAA G  E ++++P   +    VE R G  RE ERK KHFDFLKEV +NKKQARANKA+FRDQRDEYLEEMRKAFKLMQIKER+ESGFKWVKRP+R+R++PL EL+LG++HE VVITVKEHGAYVDFGA KDGFVRLRDLSDRDFVLDARDY+RPGD V+F+VKY+SPAEGIVTGSLVPAE+ET +E  ART L EV E DELWGEVTKVSNYGAFVDVG EVQGFLH+IYYP+R++GALTQDVF PGMRLRVWAMEVD ++RRLKLT ERPRSLPRVDYSW++GG+EVAGSE APGRGFVEE   +P YE+GQGLQ RGRGK AMER++EW F+ + GR          +KE++H+LDA
Sbjct:   15 RRSAARTFACCIVALGCVAWSSHAAFISPLHHFGCGRARGRVHTAVVAERPSVQPTPSIYSAATGHGEEESEAPRLNSD---VEGRRGSPRELERKKKHFDFLKEVGKNKKQARANKARFRDQRDEYLEEMRKAFKLMQIKERQESGFKWVKRPKRERQIPLGELELGSRHEGVVITVKEHGAYVDFGATKDGFVRLRDLSDRDFVLDARDYVRPGDAVSFFVKYLSPAEGIVTGSLVPAEVETAEEQEARTGLEEVEEDDELWGEVTKVSNYGAFVDVGAEVQGFLHVIYYPRRSEGALTQDVFFPGMRLRVWAMEVDRDRRRLKLTGERPRSLPRVDYSWFLGGYEVAGSEAAPGRGFVEEEWRRPLYEEGQGLQPRGRGKRAMERIREWGFETDGGR----------KKEMLHDLDA 421          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: GAX16796.1 (small subunit ribosomal protein S1 [Fistulifera solaris])

HSP 1 Score: 125.6 bits (314), Expect = 4.000e-25
Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 0
Query:  151 VKRPRR-DRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEI---ETEKELAA-RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPK--RAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLP 337
            V+RP   D + PL+ L  G +   +VI++ + GAY+D G + DG + +  +S   FV   +  L PGD V   V+ +SP +  +  S++P +I   ET  + A  R PL +++  DELWGE  +++++GA+V+VG EV  FLH + +P    ++G+   +  + G R+R+W  ++D E+RR+K+TA RP  LP
Sbjct:  121 VQRPLPFDDRTPLTALIPGMEVTGIVISLTKFGAYIDIGTECDGLLHVSQISRDVFVEHPKQILTPGDEVTVRVRSISPEKKKLHLSMLPEDILREETSDDFAKNRIPLVDIQVDDELWGEFKRITDFGAYVEVGAEVDAFLHFMDHPAFGWSKGSHPSEFMKVGDRVRIWVSDLDFEQRRIKVTANRPSYLP 313          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: OEU22490.1 (S1-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 124.0 bits (310), Expect = 1.200e-24
Identity = 74/212 (34.91%), Postives = 119/212 (56.13%), Query Frame = 0
Query:  135 FKLMQIKEREESGFKWVKRPRR-DRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSP-AEGIVTGSLVPAEIET--------EKELAARTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLP 337
            FK +Q  ++++S    V+RP   D + PL+    G +    VI++  +GAYVD G + DG + +  ++ + FV   R  L PGD V   +  +SP  + +    L  A++E         + +   +TPL E    DELWGE+ +V+++GA+V+VG EV GFLH + +P    GA   +    G R+RVW  ++D EK R+++TA RP++LP
Sbjct:  143 FKELQQDKKKDSR---VQRPLGFDERAPLTAFFPGMEVTGTVISLIPYGAYVDIGTECDGLLHISQITRKFFVEHPRQVLTPGDEVTVRIHKISPELKKMQLTMLDVADVEVSLVGSDNDDDDSEEKTPLTEFELDDELWGELKRVTDFGAYVEVGAEVDGFLHFMDHPLWEDGAQPFEFMERGQRVRVWVADLDMEKNRIRVTATRPQNLP 351          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: EJK69266.1 (hypothetical protein THAOC_09487 [Thalassiosira oceanica])

HSP 1 Score: 120.9 bits (302), Expect = 9.800e-24
Identity = 78/249 (31.33%), Postives = 131/249 (52.61%), Query Frame = 0
Query:  111 KQARANKAKFRDQRDEYLEEMRKAFKLMQIKEREESGFKWVKR--PRRDRKMP-LSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAA----------RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYP--KRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSL--PRVDYSW 343
            K+A+    + + +R+    + R+     +  E +    K+V+R  P   +K   L +++ G      VI++ + GAY+D G + DG + +  +S  +FV   R+YL PGD     V  V P +  +  +++P E+  E+ +            R  L E+   DELWGE+ +V++YGA+V+VG   +GFLH + +P  + + GA  +D+   G R+RVW ++VD    R+KLTA RP  L  PR +  W
Sbjct:  104 KEAQERAIRNKKRREPAAAKKRRLHSQYKEMESQSKREKYVRRDLPVNSKKRTLLKDIEPGTSLSGKVISLTKFGAYIDVGTEADGLLHVSQISRDEFVEHPRNYLAPGDEAEVRVVRVDPTQKKLQLTMLPEEVLDEENVMKSLEMNPDEDDRIQLDEIEVDDELWGEIRRVTDYGAYVEVGSVTRGFLHFMDHPSWEDSVGAHPRDIMSVGDRVRVWVVDVDGMLNRIKLTANRPTGLPGPRREIKW 352          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: CBN74491.1 (30S ribosomal protein S1 [Ectocarpus siliculosus])

HSP 1 Score: 117.1 bits (292), Expect = 1.400e-22
Identity = 89/256 (34.77%), Postives = 136/256 (53.12%), Query Frame = 0
Query:   92 EEERKS---KHFDFLKEVAQNKKQARANKAKFRDQ--RDEYLEEMRKAFKLMQIKEREESGFKWVKRPRRDRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAARTP-----LAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLPR 338
            +E+RK+    H D+L E  +N++ A A + K+  +  RD+ + ++ K      ++E       W  R  R     L +L+ G   +  V  V+ +GA+VD  A++DG + ++D+ +  F   A + +   D +   VK+V P  G +  SLV  +   E +L    P     +A+V    ELWG V +V+N GA+V+VG EV GFL +   P R +G     V R   RLRV+A EVD E  R+KLT +RPRSLPR
Sbjct:   94 QEKRKTFSKAHNDYLDEAQRNREIAAARREKYTKKFYRDKKIYDIVKERGRKAVREA-----TWATRWPRQVTRKLEDLQEGEWIKGKVRNVESYGAWVDVNAERDGLLHVKDMGE-TFTPSAGEVVATKDIIQARVKFVDPVTGKLGLSLV-EDGPREGDLPLPPPRPPISVADVSRGAELWGYVERVTNMGAYVNVGAEVPGFLLLKEIPGRPRGLGAPQVLRRNKRLRVYAREVDREGLRIKLTCKRPRSLPR 342          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: GAX13928.1 (small subunit ribosomal protein S1 [Fistulifera solaris])

HSP 1 Score: 115.9 bits (289), Expect = 3.200e-22
Identity = 67/193 (34.72%), Postives = 114/193 (59.07%), Query Frame = 0
Query:  151 VKRPRR-DRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEI---ETEKELAA-RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPK--RAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLP 337
            V+RP   D + PL+ L  G +   +VI++ + GAY+D G + DG + +  +S   FV   +  L PGD V   V+ ++  +  +  S++P +I   ET  + A  R  L +++  DELWGE  +++++GA+V+VG EV  FLH + +P    ++G+   +  + G R+R+W  ++D E+RR+K+TA RP  LP
Sbjct:   97 VQRPLPFDDRTPLTALIPGMEVTGIVISLTKFGAYIDIGTECDGLLHVSQISRDVFVEHPKQILTPGDEVMVRVRSINAEKKKLHLSMLPEDILREETSDDFAKNRIALVDMQVDDELWGEFKRITDFGAYVEVGAEVDAFLHFMDHPAFGWSKGSHPTEFMKVGDRVRIWVSDLDFEQRRIKVTANRPPYLP 289          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: OSX75041.1 (hypothetical protein BU14_0257s0011 [Porphyra umbilicalis])

HSP 1 Score: 102.1 bits (253), Expect = 4.700e-18
Identity = 73/189 (38.62%), Postives = 97/189 (51.32%), Query Frame = 0
Query:  154 PRRDRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLV--PAEIETEKELAA--RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHI-IYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLPR 338
            PRR     L  L  G + +  V  + +HGAYVD GA  DG V LRD+S  +FV +  D L PGDTV  YVKY     G +  SL+     + T    AA  RT L +V     + G V +VSN+GA+VDVG  + GF+H+ + Y +R +  L +   R G  L V    VD  +  +KL A    S  R
Sbjct:  113 PRRS----LDALVAGQRLDGTVTNLVKHGAYVDVGATTDGLVHLRDMS-VEFVHEPEDILAPGDTVEVYVKYAEEVTGRLALSLLRPRPSVATPLPQAARGRTRLVDVAVGSRVLGTVRRVSNFGAYVDVGAAMDGFVHVSLLYGRRPRRTLEE--LRLGQELWVVVDAVDVARSAIKLRARGRSSYNR 294          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: CEL97137.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 88.6 bits (218), Expect = 5.400e-14
Identity = 59/210 (28.10%), Postives = 108/210 (51.43%), Query Frame = 0
Query:  139 QIKEREESGFKWVKRPRRDRK-MPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSD--RDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAA-----------RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHI--IYYPKRAQG---ALTQDVFRPGMRLR-VWAMEVDTEKRRLKLT 329
            Q K+ E   ++ VKR    +K +P+S  ++G +    VI +K+HGA++D G  +   + +RD+++    ++    D L PG  +N  VKY +P++G++  +L P +++  +   A           R P+   R  + + G VT+V+  G FVD+G +V  ++H   +  P R +G     T D F  G   + ++   VD  + RL++T
Sbjct:  146 QAKDGERQKWRKVKRLAPQKKLLPISMFRVGERIRGRVIQLKQHGAWIDIGCTQKALLHIRDMAEEGEGWISSPTDKLVPGQELNVTVKYAAPSQGVLAVTLRPNDVQRLQSQPAVVPEQAGPAERRRPVDSFRLEERVDGVVTRVTEKGCFVDIGADVDAWMHTMDVEDPYRDRGRNFKATSDFFHVGQHFQGLYIKTVDKVRNRLRVT 355          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: WP_054493886.1 (hypothetical protein [Ardenticatena maritima] >GAP64152.1 small subunit ribosomal protein S1 [Ardenticatena maritima])

HSP 1 Score: 87.0 bits (214), Expect = 1.600e-13
Identity = 50/175 (28.57%), Postives = 91/175 (52.00%), Query Frame = 0
Query:  162 LSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAA---RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPR 334
            + EL  G + + +V + +++GA+VD GA+ DG V + +L D  FV    D +  GD V  +VK +      ++ +++      E +  A   +  L ++ E  E  G VT + ++GAFVD+G E  G +HI    +     + +DV   G  ++V  + +D +++R+ L+   PR
Sbjct:   76 MDELTPGMELKGIVRSTQDYGAFVDIGAETDGLVHISELKD-GFVEKVEDVVSEGDEVTVWVKEIDLERKRISLTMIDPNAPRESQREADDGKLRLRDLEEGQEFTGIVTSIVDFGAFVDIGAETDGLVHISELSEERVNRV-EDVVEVGQEVKVRIIGIDRKRKRISLSMREPR 248          
BLAST of NO15G01070 vs. NCBI_GenBank
Match: OGO05506.1 (hypothetical protein A2Y73_05950 [Chloroflexi bacterium RBG_13_56_8])

HSP 1 Score: 80.1 bits (196), Expect = 1.900e-11
Identity = 58/207 (28.02%), Postives = 102/207 (49.28%), Query Frame = 0
Query:  156 RDRKMP--LSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAARTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALT--QDVFRPGMRLRVWAMEVDTEKRRLKL--------TAERPRSLPRVDYSWYMGGFEVA 351
            +D+  P  +  LK G + +  V  V + GA++D G  +DG   +  L      +D+   ++PGD +N  V+ ++  E  ++ S+  AE E +     +T L +++    + G V ++ ++GAF+D+G    G LHI   P    G +    +V  PG  +RV  ++VD+ KRR+ L        + + P S+   +   Y   FEVA
Sbjct:   45 KDQPQPSGIEALKPGTRVKGKVRNVVDFGAFIDIGVGRDGLAHISTLKRAG--IDST--IKPGDVLNVVVRRINVEENRISLSIPAAESEEQN----KTSLRDLQVNSVVTGHVARLVDFGAFIDIGARSDGLLHISQLP---FGFINHPSEVLNPGDEVRVRIIDVDSRKRRISLSMKGLDEDSEQEPASVEEEEGQDYPTAFEVA 240          
The following BLAST results are available for this feature:
BLAST of NO15G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22454.18.000e-16772.8630s ribosomal protein s1 [Nannochloropsis gaditana... [more]
GAX16796.14.000e-2536.27small subunit ribosomal protein S1 [Fistulifera so... [more]
OEU22490.11.200e-2434.91S1-domain-containing protein [Fragilariopsis cylin... [more]
EJK69266.19.800e-2431.33hypothetical protein THAOC_09487 [Thalassiosira oc... [more]
CBN74491.11.400e-2234.7730S ribosomal protein S1 [Ectocarpus siliculosus][more]
GAX13928.13.200e-2234.72small subunit ribosomal protein S1 [Fistulifera so... [more]
OSX75041.14.700e-1838.62hypothetical protein BU14_0257s0011 [Porphyra umbi... [more]
CEL97137.15.400e-1428.10unnamed protein product [Vitrella brassicaformis C... [more]
WP_054493886.11.600e-1328.57hypothetical protein [Ardenticatena maritima] >GAP... [more]
OGO05506.11.900e-1128.02hypothetical protein A2Y73_05950 [Chloroflexi bact... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001500NSK001500Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01070.1NO15G01070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554549gene_4649Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g28gene7958Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01070.1NO15G01070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01070 ID=NO15G01070|Name=NO15G01070|organism=Nannochloropsis oceanica|type=gene|length=1761bp
ACAGGTGGACTCGGGACTGGGAGCTTGGAGGGCAGGGCATCTCGACGCAC
TGGAGTGCGCATCATCAGCAGGAGTTGAAGGACTGTTCGTCATTGCGTGG
CCCACAGACCTAGGCATACCCATGGCACGACGCCCTGCTGCATGGGCACT
TGCTTGTTGCGTGCTTGCAATAGATTGCGCGGCATTGTCGTCACATGCTG
CCTTCGTATCCCCTCTGCCCTCCTTCGCATGCGGGCGAGGACGAGGCAGG
GCACACACGGCAGTGGTGGCGGAGAAGCCTTTGTCCACGCCGTCCATCTA
CTCAGCCGCTGCAGGCCAAGAAGAATACGACACCCAATCACCAACAACTG
AAGCAGCAGTCGTAGTAGTAGAAGTCAGGGGGGGAAAAACTCGGGAGGAA
GAGCGCAAGAGCAAGCACTTTGATTTCCTCAAGgtatgtatgtagtgcac
atgagaagggagggagggcaagggcacatactcctctagaaacaaccact
ttccatgttctgggcgactttcgcagttggtaagagttgccatcatgtaa
tgttttggaaggagagagacctgtcgggctaccatagacacaagatctca
ccaacttctcttccctcgcctccctgtactatattctccccacactttgc
agGAAGTCGCTCAGAACAAGAAGCAAGCTCGGGCCAACAAGGCCAAATTT
CGTGACCAACGAGATGAGTACTTGGAGGAAATGCGTAAGGCCTTCAAACT
CATGCAGATAAAAGAGCGGGAGGAGAGTGGCTTTAAGTGGGTCAAGCGGC
CTAGGCGCGACCGAAAGATGCCTCTCTCGGAGCTCAAGCTGGGCGCCAAG
CACGAGGCGGTCGTCATCACTGTAAAGGAGCACGGAGCATACGTGGATTT
CGGGGCCAAGAAGGACGGTTTCGTACGTTTGCGTGACTTGAGCGACCGAG
ACTTTGTGCTGGACGCGCGGGACTATTTGAGGCCGGGTGACACAGTCAAT
TTTTACGTCAAGTACGTGAGCCCCGCCGAGGGTATTGTGACGGGCAGTTT
GGTCCCAGCCGAGATTGAGACGGAGAAGGAACTGGCAGCCCGAACGCCTT
TGGCCGAGGTCCGGGAGGCGGATGAGCTTTGGGGTGAGGTGACCAAGGTG
TCGAATTACGGGGCCTTCGTGGATGTGGGCGTTGAGGTGCAAGGCTTCCT
TCACATTATCTACTACCCCAAGCGGGCCCAGGGGGCTTTGACGCAGGATG
TGTTTCGCCCCGGTATGCGCCTAAGGGTGTGGGCTATGGAGGTGGACACG
GAGAAGCGTCGCTTGAAGCTGACGGCGGAACGGCCTCGTTCCCTCCCTCG
GGTGGATTACTCTTGGTACATGGGTGGCTTTGAGGTGGCGGGATCAGAGG
ATGCACCTGGACGAGGATTCGTGGAGGAGATGGACTTTCAGCCGTCGTAT
GAGGATGGACAGGGGCTGCAGGCACGGGGCAGGGGAAAGCATGCGATGGA
GAGGATGCAAGAGTGGAATTTTGATGATGAGAGTGGGCGCAATGGGGGAA
TGAGGAGAAGGGGGGAGGGGGAGAAGGAGGTGGTGCATAATTTGGATGCG
GACCGGCAAGGAATGGATAAAGAAGAGGCAGCATTGGCGCTGGAAGAGAA
GGCGGGCCAAAATGGCAGCCCTGCAAGTAAGTGAGCGGGGAGACCTCAGA
TTCATTCACATGTGAGTAGCGCAAGGCAGAGGGAAAAGAAGAAGAAAAAG
AAGGGGCCATT
back to top

protein sequence of NO15G01070.1

>NO15G01070.1-protein ID=NO15G01070.1-protein|Name=NO15G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MARRPAAWALACCVLAIDCAALSSHAAFVSPLPSFACGRGRGRAHTAVVA
EKPLSTPSIYSAAAGQEEYDTQSPTTEAAVVVVEVRGGKTREEERKSKHF
DFLKEVAQNKKQARANKAKFRDQRDEYLEEMRKAFKLMQIKEREESGFKW
VKRPRRDRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDL
SDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAA
RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGAL
TQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLPRVDYSWYMGGFEVA
GSEDAPGRGFVEEMDFQPSYEDGQGLQARGRGKHAMERMQEWNFDDESGR
NGGMRRRGEGEKEVVHNLDADRQGMDKEEAALALEEKAGQNGSPASK*
back to top
Synonyms
Publications