NO15G01070, NO15G01070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01070 vs. NCBI_GenBank
Match: EWM22454.1 (30s ribosomal protein s1 [Nannochloropsis gaditana]) HSP 1 Score: 596.3 bits (1536), Expect = 8.000e-167 Identity = 306/420 (72.86%), Postives = 351/420 (83.57%), Query Frame = 0 Query: 3 RRPAAWALACCVLAIDCAALSSHAAFVSPLPSFACGRGRGRAHTAVVAEKP--LSTPSIYSAAAGQEEYDTQSPTTEAAVVVVEVRGGKTREEERKSKHFDFLKEVAQNKKQARANKAKFRDQRDEYLEEMRKAFKLMQIKEREESGFKWVKRPRRDRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAARTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLPRVDYSWYMGGFEVAGSEDAPGRGFVEEMDFQPSYEDGQGLQARGRGKHAMERMQEWNFDDESGRNGGMRRRGEGEKEVVHNLDA 421 RR AA ACC++A+ C A SSHAAF+SPL F CGR RGR HTAVVAE+P TPSIYSAA G E ++++P + VE R G RE ERK KHFDFLKEV +NKKQARANKA+FRDQRDEYLEEMRKAFKLMQIKER+ESGFKWVKRP+R+R++PL EL+LG++HE VVITVKEHGAYVDFGA KDGFVRLRDLSDRDFVLDARDY+RPGD V+F+VKY+SPAEGIVTGSLVPAE+ET +E ART L EV E DELWGEVTKVSNYGAFVDVG EVQGFLH+IYYP+R++GALTQDVF PGMRLRVWAMEVD ++RRLKLT ERPRSLPRVDYSW++GG+EVAGSE APGRGFVEE +P YE+GQGLQ RGRGK AMER++EW F+ + GR +KE++H+LDA Sbjct: 15 RRSAARTFACCIVALGCVAWSSHAAFISPLHHFGCGRARGRVHTAVVAERPSVQPTPSIYSAATGHGEEESEAPRLNSD---VEGRRGSPRELERKKKHFDFLKEVGKNKKQARANKARFRDQRDEYLEEMRKAFKLMQIKERQESGFKWVKRPKRERQIPLGELELGSRHEGVVITVKEHGAYVDFGATKDGFVRLRDLSDRDFVLDARDYVRPGDAVSFFVKYLSPAEGIVTGSLVPAEVETAEEQEARTGLEEVEEDDELWGEVTKVSNYGAFVDVGAEVQGFLHVIYYPRRSEGALTQDVFFPGMRLRVWAMEVDRDRRRLKLTGERPRSLPRVDYSWFLGGYEVAGSEAAPGRGFVEEEWRRPLYEEGQGLQPRGRGKRAMERIREWGFETDGGR----------KKEMLHDLDA 421
BLAST of NO15G01070 vs. NCBI_GenBank
Match: GAX16796.1 (small subunit ribosomal protein S1 [Fistulifera solaris]) HSP 1 Score: 125.6 bits (314), Expect = 4.000e-25 Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 0 Query: 151 VKRPRR-DRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEI---ETEKELAA-RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPK--RAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLP 337 V+RP D + PL+ L G + +VI++ + GAY+D G + DG + + +S FV + L PGD V V+ +SP + + S++P +I ET + A R PL +++ DELWGE +++++GA+V+VG EV FLH + +P ++G+ + + G R+R+W ++D E+RR+K+TA RP LP Sbjct: 121 VQRPLPFDDRTPLTALIPGMEVTGIVISLTKFGAYIDIGTECDGLLHVSQISRDVFVEHPKQILTPGDEVTVRVRSISPEKKKLHLSMLPEDILREETSDDFAKNRIPLVDIQVDDELWGEFKRITDFGAYVEVGAEVDAFLHFMDHPAFGWSKGSHPSEFMKVGDRVRIWVSDLDFEQRRIKVTANRPSYLP 313
BLAST of NO15G01070 vs. NCBI_GenBank
Match: OEU22490.1 (S1-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 124.0 bits (310), Expect = 1.200e-24 Identity = 74/212 (34.91%), Postives = 119/212 (56.13%), Query Frame = 0 Query: 135 FKLMQIKEREESGFKWVKRPRR-DRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSP-AEGIVTGSLVPAEIET--------EKELAARTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLP 337 FK +Q ++++S V+RP D + PL+ G + VI++ +GAYVD G + DG + + ++ + FV R L PGD V + +SP + + L A++E + + +TPL E DELWGE+ +V+++GA+V+VG EV GFLH + +P GA + G R+RVW ++D EK R+++TA RP++LP Sbjct: 143 FKELQQDKKKDSR---VQRPLGFDERAPLTAFFPGMEVTGTVISLIPYGAYVDIGTECDGLLHISQITRKFFVEHPRQVLTPGDEVTVRIHKISPELKKMQLTMLDVADVEVSLVGSDNDDDDSEEKTPLTEFELDDELWGELKRVTDFGAYVEVGAEVDGFLHFMDHPLWEDGAQPFEFMERGQRVRVWVADLDMEKNRIRVTATRPQNLP 351
BLAST of NO15G01070 vs. NCBI_GenBank
Match: EJK69266.1 (hypothetical protein THAOC_09487 [Thalassiosira oceanica]) HSP 1 Score: 120.9 bits (302), Expect = 9.800e-24 Identity = 78/249 (31.33%), Postives = 131/249 (52.61%), Query Frame = 0 Query: 111 KQARANKAKFRDQRDEYLEEMRKAFKLMQIKEREESGFKWVKR--PRRDRKMP-LSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAA----------RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYP--KRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSL--PRVDYSW 343 K+A+ + + +R+ + R+ + E + K+V+R P +K L +++ G VI++ + GAY+D G + DG + + +S +FV R+YL PGD V V P + + +++P E+ E+ + R L E+ DELWGE+ +V++YGA+V+VG +GFLH + +P + + GA +D+ G R+RVW ++VD R+KLTA RP L PR + W Sbjct: 104 KEAQERAIRNKKRREPAAAKKRRLHSQYKEMESQSKREKYVRRDLPVNSKKRTLLKDIEPGTSLSGKVISLTKFGAYIDVGTEADGLLHVSQISRDEFVEHPRNYLAPGDEAEVRVVRVDPTQKKLQLTMLPEEVLDEENVMKSLEMNPDEDDRIQLDEIEVDDELWGEIRRVTDYGAYVEVGSVTRGFLHFMDHPSWEDSVGAHPRDIMSVGDRVRVWVVDVDGMLNRIKLTANRPTGLPGPRREIKW 352
BLAST of NO15G01070 vs. NCBI_GenBank
Match: CBN74491.1 (30S ribosomal protein S1 [Ectocarpus siliculosus]) HSP 1 Score: 117.1 bits (292), Expect = 1.400e-22 Identity = 89/256 (34.77%), Postives = 136/256 (53.12%), Query Frame = 0 Query: 92 EEERKS---KHFDFLKEVAQNKKQARANKAKFRDQ--RDEYLEEMRKAFKLMQIKEREESGFKWVKRPRRDRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAARTP-----LAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLPR 338 +E+RK+ H D+L E +N++ A A + K+ + RD+ + ++ K ++E W R R L +L+ G + V V+ +GA+VD A++DG + ++D+ + F A + + D + VK+V P G + SLV + E +L P +A+V ELWG V +V+N GA+V+VG EV GFL + P R +G V R RLRV+A EVD E R+KLT +RPRSLPR Sbjct: 94 QEKRKTFSKAHNDYLDEAQRNREIAAARREKYTKKFYRDKKIYDIVKERGRKAVREA-----TWATRWPRQVTRKLEDLQEGEWIKGKVRNVESYGAWVDVNAERDGLLHVKDMGE-TFTPSAGEVVATKDIIQARVKFVDPVTGKLGLSLV-EDGPREGDLPLPPPRPPISVADVSRGAELWGYVERVTNMGAYVNVGAEVPGFLLLKEIPGRPRGLGAPQVLRRNKRLRVYAREVDREGLRIKLTCKRPRSLPR 342
BLAST of NO15G01070 vs. NCBI_GenBank
Match: GAX13928.1 (small subunit ribosomal protein S1 [Fistulifera solaris]) HSP 1 Score: 115.9 bits (289), Expect = 3.200e-22 Identity = 67/193 (34.72%), Postives = 114/193 (59.07%), Query Frame = 0 Query: 151 VKRPRR-DRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEI---ETEKELAA-RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPK--RAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLP 337 V+RP D + PL+ L G + +VI++ + GAY+D G + DG + + +S FV + L PGD V V+ ++ + + S++P +I ET + A R L +++ DELWGE +++++GA+V+VG EV FLH + +P ++G+ + + G R+R+W ++D E+RR+K+TA RP LP Sbjct: 97 VQRPLPFDDRTPLTALIPGMEVTGIVISLTKFGAYIDIGTECDGLLHVSQISRDVFVEHPKQILTPGDEVMVRVRSINAEKKKLHLSMLPEDILREETSDDFAKNRIALVDMQVDDELWGEFKRITDFGAYVEVGAEVDAFLHFMDHPAFGWSKGSHPTEFMKVGDRVRIWVSDLDFEQRRIKVTANRPPYLP 289
BLAST of NO15G01070 vs. NCBI_GenBank
Match: OSX75041.1 (hypothetical protein BU14_0257s0011 [Porphyra umbilicalis]) HSP 1 Score: 102.1 bits (253), Expect = 4.700e-18 Identity = 73/189 (38.62%), Postives = 97/189 (51.32%), Query Frame = 0 Query: 154 PRRDRKMPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLV--PAEIETEKELAA--RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHI-IYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPRSLPR 338 PRR L L G + + V + +HGAYVD GA DG V LRD+S +FV + D L PGDTV YVKY G + SL+ + T AA RT L +V + G V +VSN+GA+VDVG + GF+H+ + Y +R + L + R G L V VD + +KL A S R Sbjct: 113 PRRS----LDALVAGQRLDGTVTNLVKHGAYVDVGATTDGLVHLRDMS-VEFVHEPEDILAPGDTVEVYVKYAEEVTGRLALSLLRPRPSVATPLPQAARGRTRLVDVAVGSRVLGTVRRVSNFGAYVDVGAAMDGFVHVSLLYGRRPRRTLEE--LRLGQELWVVVDAVDVARSAIKLRARGRSSYNR 294
BLAST of NO15G01070 vs. NCBI_GenBank
Match: CEL97137.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 88.6 bits (218), Expect = 5.400e-14 Identity = 59/210 (28.10%), Postives = 108/210 (51.43%), Query Frame = 0 Query: 139 QIKEREESGFKWVKRPRRDRK-MPLSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSD--RDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAA-----------RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHI--IYYPKRAQG---ALTQDVFRPGMRLR-VWAMEVDTEKRRLKLT 329 Q K+ E ++ VKR +K +P+S ++G + VI +K+HGA++D G + + +RD+++ ++ D L PG +N VKY +P++G++ +L P +++ + A R P+ R + + G VT+V+ G FVD+G +V ++H + P R +G T D F G + ++ VD + RL++T Sbjct: 146 QAKDGERQKWRKVKRLAPQKKLLPISMFRVGERIRGRVIQLKQHGAWIDIGCTQKALLHIRDMAEEGEGWISSPTDKLVPGQELNVTVKYAAPSQGVLAVTLRPNDVQRLQSQPAVVPEQAGPAERRRPVDSFRLEERVDGVVTRVTEKGCFVDIGADVDAWMHTMDVEDPYRDRGRNFKATSDFFHVGQHFQGLYIKTVDKVRNRLRVT 355
BLAST of NO15G01070 vs. NCBI_GenBank
Match: WP_054493886.1 (hypothetical protein [Ardenticatena maritima] >GAP64152.1 small subunit ribosomal protein S1 [Ardenticatena maritima]) HSP 1 Score: 87.0 bits (214), Expect = 1.600e-13 Identity = 50/175 (28.57%), Postives = 91/175 (52.00%), Query Frame = 0 Query: 162 LSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAA---RTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALTQDVFRPGMRLRVWAMEVDTEKRRLKLTAERPR 334 + EL G + + +V + +++GA+VD GA+ DG V + +L D FV D + GD V +VK + ++ +++ E + A + L ++ E E G VT + ++GAFVD+G E G +HI + + +DV G ++V + +D +++R+ L+ PR Sbjct: 76 MDELTPGMELKGIVRSTQDYGAFVDIGAETDGLVHISELKD-GFVEKVEDVVSEGDEVTVWVKEIDLERKRISLTMIDPNAPRESQREADDGKLRLRDLEEGQEFTGIVTSIVDFGAFVDIGAETDGLVHISELSEERVNRV-EDVVEVGQEVKVRIIGIDRKRKRISLSMREPR 248
BLAST of NO15G01070 vs. NCBI_GenBank
Match: OGO05506.1 (hypothetical protein A2Y73_05950 [Chloroflexi bacterium RBG_13_56_8]) HSP 1 Score: 80.1 bits (196), Expect = 1.900e-11 Identity = 58/207 (28.02%), Postives = 102/207 (49.28%), Query Frame = 0 Query: 156 RDRKMP--LSELKLGAKHEAVVITVKEHGAYVDFGAKKDGFVRLRDLSDRDFVLDARDYLRPGDTVNFYVKYVSPAEGIVTGSLVPAEIETEKELAARTPLAEVREADELWGEVTKVSNYGAFVDVGVEVQGFLHIIYYPKRAQGALT--QDVFRPGMRLRVWAMEVDTEKRRLKL--------TAERPRSLPRVDYSWYMGGFEVA 351 +D+ P + LK G + + V V + GA++D G +DG + L +D+ ++PGD +N V+ ++ E ++ S+ AE E + +T L +++ + G V ++ ++GAF+D+G G LHI P G + +V PG +RV ++VD+ KRR+ L + + P S+ + Y FEVA Sbjct: 45 KDQPQPSGIEALKPGTRVKGKVRNVVDFGAFIDIGVGRDGLAHISTLKRAG--IDST--IKPGDVLNVVVRRINVEENRISLSIPAAESEEQN----KTSLRDLQVNSVVTGHVARLVDFGAFIDIGARSDGLLHISQLP---FGFINHPSEVLNPGDEVRVRIIDVDSRKRRISLSMKGLDEDSEQEPASVEEEEGQDYPTAFEVA 240 The following BLAST results are available for this feature:
BLAST of NO15G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01070 ID=NO15G01070|Name=NO15G01070|organism=Nannochloropsis oceanica|type=gene|length=1761bpback to top protein sequence of NO15G01070.1 >NO15G01070.1-protein ID=NO15G01070.1-protein|Name=NO15G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bpback to top Synonyms
Publications
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