NO15G01050, NO15G01050 (gene) Nannochloropsis oceanica

Overview
NameNO15G01050
Unique NameNO15G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1178
Alignment locationchr15:307622..308799 +

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Properties
Property NameValue
DescriptionLysosomal aspartic protease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:307622..308799 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016540protein autoprocessing
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR033145Cathepsin_E
IPR033121PEPTIDASE_A1
IPR001461Aspartic_peptidase
Homology
BLAST of NO15G01050 vs. NCBI_GenBank
Match: EWM22434.1 (lysosomal aspartic protease [Nannochloropsis gaditana])

HSP 1 Score: 428.7 bits (1101), Expect = 1.700e-116
Identity = 212/395 (53.67%), Postives = 268/395 (67.85%), Query Frame = 0
Query:    1 MQEGRNKQLLLLLATITSSIGATAIAMAERDSPPTLEPTLMRIPLAKVALPPRGVHHRQRGLAE----KGEIILRDVYQDVAY-----------------------------------------TDSSSTFKRDGGRFEITYMGGPVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGATATNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDGPLCLLGLQGDEHMSAQWILGDVFLRKYYSAYDYKNKRVGLALATKG 351
            M++  +  L+LLL  +         A A+  S      TL+RIPL K  +PPR    RQR LAE    KG+I+L D++QD AY                                         +D+SS+F++DG  F+ITY+GGPV+GYLAEDTV   GYAV+NQ+FAQITNPLGLG SY GGGYDGV GLGFDE+SV  + TPFHNLI+QQG+ LP+P+FAF+L     G  ELTVGGTDPSHY G LHW+PL +PPGYWAVGLD V+LG +  QS+A   V+DSG S+++GPK DVDAI EGLGAT    ++TV+C  +  MP +EF++DGQPYAL+ADDY+++D  +CL+GLQGD+H  AQWILGD+FLRK+YSAYDY+N+R GLALA  G
Sbjct:    1 MKQSHHFGLILLLYLVFE-------ATADFSSVDAGGTTLIRIPLVKANVPPRADPRRQRSLAEEIDSKGDIVLHDIHQDAAYIGSIGIGTPPREFTVIFDTGSSDLWIPSALCKVCGHRNKYNSDASSSFEQDGRSFQITYIGGPVTGYLAEDTVLFAGYAVKNQSFAQITNPLGLGASYSGGGYDGVFGLGFDELSVTKSTTPFHNLIEQQGEVLPQPIFAFFLANGDTGPSELTVGGTDPSHYEGDLHWMPLHDPPGYWAVGLDSVYLGPRKLQSQAGAVVLDSGTSIMVGPKTDVDAIFEGLGATLVENLFTVNCSLKAAMPDLEFILDGQPYALSADDYLVQDRDICLVGLQGDDHAQAQWILGDMFLRKFYSAYDYQNRRAGLALAKTG 388          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: EWM22250.1 (aspartic protease [Nannochloropsis gaditana])

HSP 1 Score: 248.4 bits (633), Expect = 3.200e-62
Identity = 129/271 (47.60%), Postives = 175/271 (64.58%), Query Frame = 0
Query:   81 DSSSTFKRDGGRFEITYMGGPVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGATA-TNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDGPLCL---LGLQGDEHMSAQWILGDVFLRKYYSAYDYKNKRVGLALA 348
            D+S T+  +G  F+I Y  GPV GY +ED V LGG  +  Q FA++T+  GLG ++  G +DG+LGLGFD ISV    TPFHNLI+Q    + EPVF+FYLG      GELT+GGTDP+HY G +H+VPL+    YW V L+ V +    S +    A++DSG SLI GPK++V  +A+ +GAT      Y +DC  +   P I+FV+DG+ Y+L+ADDY I DG LCL   +GL         WILGD F+R+YY+ ++Y+ + VGLALA
Sbjct:  110 DASDTYVENGAIFKIMYGSGPVQGYFSEDDVELGGLTISQQAFAEVTDASGLGAAFAAGSFDGILGLGFDSISVGKVTTPFHNLIKQ--GLVAEPVFSFYLGDNAP--GELTLGGTDPAHYKGDIHYVPLKSAT-YWEVALEDVQVHGL-SLTNVDSAIIDSGTSLITGPKKEVAKLAKLVGATRFILGEYLIDCNAQG--PDIDFVIDGRTYSLSADDYKIRDGGLCLFAFMGLDIPRPSGPLWILGDSFMRRYYTTFNYEKQTVGLALA 372          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: CBJ29800.1 (aspartyl protease [Ectocarpus siliculosus])

HSP 1 Score: 233.8 bits (595), Expect = 8.200e-58
Identity = 122/272 (44.85%), Postives = 172/272 (63.24%), Query Frame = 0
Query:   83 SSTFKRDGGRFEITYMGGPVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGATA-TNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDG--PLCLLGLQG---DEHMSAQWILGDVFLRKYYSAYDYKNKRVGLALAT 349
            SST   DG  FEITY  GPVSG L+ DTVT GG  +++QTFA++ +  GLG +++ G +DG++GL FDEISV    TPF  L+++    L + VFAFYLG +    GEL +GGTDP HYL ++++VP+ +  GYW + +D V +    S +    A++DSG SL++GPK DV  IA  +GA +  N  Y + C     +P + F + G+ Y L  D+YVI  G   +C+L + G    E M   WILGDVF+RKYY+ +DY N ++GLA +T
Sbjct:  147 SSTHAEDGRDFEITYASGPVSGSLSADTVTWGGIQLKDQTFAEVQDAKGLGLAFILGKFDGIMGLAFDEISVEGVPTPFGRLVEE--GELDDAVFAFYLGNQKE--GELIIGGTDPDHYLHEINYVPVTK-KGYWQIDMDNVDVSG-SSVTSVKSAILDSGTSLLVGPKEDVKKIASKVGAISFMNGEYLMPCS--SDLPPLTFTIGGKEYTLEGDEYVISAGNDKVCILAIMGMDIPEPMGPLWILGDVFMRKYYTVFDYGNAQIGLATST 410          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: XP_005853900.1 (cathepsin D [Nannochloropsis gaditana CCMP526] >EKU22454.1 cathepsin D [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 228.0 bits (580), Expect = 4.500e-56
Identity = 119/248 (47.98%), Postives = 161/248 (64.92%), Query Frame = 0
Query:  104 GYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGATA-TNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDGPLCL---LGLQGDEHMSAQWILGDVFLRKYYSAYDYKNKRVGLALA 348
            GY +ED V LGG  +  Q FA++T+  GLG ++  G +DG+LGLGFD ISV    TPFHNLI+Q    + EPVF+FYLG      GELT+GGTDP+HY G +H+VPL+    YW V L+ V +    S +    A++DSG SLI GPK++V  +A+ +GAT      Y +DC  +   P I+FV+DG+ Y+L+ADDY I DG LCL   +GL         WILGD F+R+YY+ ++Y+ + VGLALA
Sbjct:  187 GYFSEDDVELGGLTISQQAFAEVTDASGLGAAFAAGSFDGILGLGFDSISVGKVTTPFHNLIKQ--GLVAEPVFSFYLGDNAP--GELTLGGTDPAHYKGDIHYVPLKSAT-YWEVALEDVQVQGL-SLTNVDSAIIDSGTSLITGPKKEVAKLAKLVGATRFILGEYLIDCNAQG--PDIDFVIDGRTYSLSADDYKIRDGGLCLFAFMGLDIPRPSGPLWILGDSFMRRYYTTFNYEKQSVGLALA 426          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: CEL99302.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 225.7 bits (574), Expect = 2.200e-55
Identity = 120/278 (43.17%), Postives = 171/278 (61.51%), Query Frame = 0
Query:   82 SSSTFKRDGGRFEITYMGGPVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGA---TATNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIE--DGPL--CLLGLQGDE--HMSAQWILGDVFLRKYYSAYDYKNKRVGLALATKG 351
            SSS++ +DG  F I Y  GPVSG+L+ D + +G   ++  TFA++T+  GLG +Y  G +DG+LGLGF  ISV     PF  ++++    + EPVFAFYLG      GEL +GG DP HY G++H+VPL     YW V L+ + +G+ DS +  H+A++DSG S++ GP + VDA+A+ +GA       + + V+C    TMP I F + G+ + L   DY ++  D P   CL   QG +  +    WILGDVF+RKYYS +DY NKR+GLA A  G
Sbjct:  189 SSSSYAKDGRNFHIVYGSGPVSGFLSSDALNVGDIQLKEYTFAEVTDASGLGLAYSIGKFDGILGLGFPSISVDGIEPPFVTMVKR--GLVKEPVFAFYLGTANGMDGELVLGGIDPKHYTGEIHYVPL-AAENYWTVRLESLLVGS-DSINAGHVAIVDSGTSIMAGPSKLVDALAKKVGAHRFFLNPQEWVVNCKNIPTMPNISFELGGKMFELTPQDYTLKLGDSPFLPCLFAFQGIDLGNGPPLWILGDVFMRKYYSIFDYGNKRIGLAKAASG 462          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: XP_009535957.1 (hypothetical protein PHYSODRAFT_352787 [Phytophthora sojae] >EGZ09324.1 hypothetical protein PHYSODRAFT_352787 [Phytophthora sojae])

HSP 1 Score: 216.9 bits (551), Expect = 1.000e-52
Identity = 124/276 (44.93%), Postives = 168/276 (60.87%), Query Frame = 0
Query:   81 DSSSTFKRDGGRFEITYMGGPVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQ-SKAHLAVMDSGASLIIGPKRDVDAIAEGLGA-TATNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDGPLCLLGLQGDE---HMSAQWILGDVFLRKYYSAYDY----KNKRVGLALA 348
            D+SST+K +G  F+I Y  GPVSG+L++DT+ LGG  V +Q FA++    GLG +Y  G +DG+ GL FD ISV +  TPFH +IQQ    L EPVFAFYLG +    GELT GGTD +HY G+L +V +     YW+V LD V   A+D Q +  + A++DSG SLI GPK  V  +A  +GA       Y + C      P I FV++G+ Y L  D+Y ++ GP+CL    G +        WILGDVF+RK+Y+ +D+    +  RVG ALA
Sbjct:  126 DASSTYKANGTAFDIMYGSGPVSGFLSQDTLALGGLTVPDQFFAEVNVTKGLGPAYYLGKFDGLFGLAFDTISVDHLKTPFHRMIQQ--GLLDEPVFAFYLGDQKD--GELTFGGTDKAHYKGELEYVDVTSAT-YWSVKLDAVE--AKDQQLTDVNKAIVDSGTSLIAGPKDQVAKLAALVGAHKFIMGEYLISC--TAAAPDISFVLNGKKYTLTKDEYTLKSGPICLFAFMGIDIPAPAGPLWILGDVFMRKHYTVFDWGTDSRKPRVGFALA 392          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: OLP88390.1 (Lysosomal aspartic protease [Symbiodinium microadriaticum])

HSP 1 Score: 216.1 bits (549), Expect = 1.800e-52
Identity = 119/274 (43.43%), Postives = 166/274 (60.58%), Query Frame = 0
Query:   83 SSTFKRDGGRFEITYMGGPVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGA-TATNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVI-EDGPLCLLGLQGDEHMSAQ---WILGDVFLRKYYSAYDYKNKRVGLALATKGS 352
            SST+K++G  F I Y  GPVSG  + D V +G   +++ TFA++    GLG  Y+ G +DG+LGLG+D ISV +  TP   L+ + GK LP+P+FAFYLG      GEL  GG DP HY G   +VPL     YW + LD V LG+ DS S    A++DSG SL+ GPK DV  IA  LGA +   + Y VDC  +  +P + F + G+ Y L+  D ++ + G  C+LGL G +  + +   WILGDVF+RKYY  +D+  +R+G A A + +
Sbjct:  422 SSTYKKNGTTFAIQYGSGPVSGVFSADDVAIGDLKLKDYTFAEVDKTSGLGIGYILGKFDGILGLGWDSISVGHVKTPMKALV-ESGK-LPKPIFAFYLGNNQP--GELLFGGVDPKHYSGDFSFVPLSSAT-YWQIKLDAVKLGS-DSVSSVKSAIVDSGTSLLAGPKDDVAKIAAKLGAKSILGKEYVVDCSAK--LPDLTFTLGGKDYTLSQPDLILQQSGSQCILGLTGIDVPAPRGPLWILGDVFMRKYYVQFDWGQQRLGFAKAVQAA 687          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: XP_002184476.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43875.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 214.5 bits (545), Expect = 5.100e-52
Identity = 113/275 (41.09%), Postives = 166/275 (60.36%), Query Frame = 0
Query:   81 DSSSTFKRDGGRFEITYMGGPVSGYLAEDTVTLG-GYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAH----LAVMDSGASLIIGPKRDVDAIAEGLGATAT-NRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDGPLCLLGLQGDE--HMSAQWILGDVFLRKYYSAYDYKNKRVGLALA 348
            +SSS++ +D G F+I Y  G VSG+ + D VTL  G  +  Q FA++ +  GLG +Y  G +DG+LGLGF  IS+ NT T F N I Q    + +P+F+FYLG      GELT GG +P+H+ G+L +V L     YW +G+D V  G+  +   A      A++DSG SLI GP++++ A+A  +GA +T    +T+DC K   MP I F+++GQ Y +   D VI+    CL    G +      QWILGDVF+RKYY+ ++Y ++ +G AL+
Sbjct:   74 ESSSSYGQDDGSFDIMYGSGSVSGFFSLDDVTLSDGLVISGQRFAEVQDAGGLGLAYALGKFDGILGLGFTSISIDNTPTVFENAISQ--NVVDQPIFSFYLGDNQP--GELTFGGFNPAHFTGELQYVKLSSAT-YWEIGMDGVSAGSYHADPNADGSPITAIVDSGTSLITGPRKEISALASSVGAKSTITGQFTIDCVKLDDMPDIVFLINGQEYVIPGKDAVIQAQGTCLFAFMGMDFPKPGPQWILGDVFMRKYYTVFNYADETIGFALS 343          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: XP_013244720.1 (putative PEP4-aspartyl protease [Tilletiaria anomala UBC 951] >KDN51374.1 putative PEP4-aspartyl protease [Tilletiaria anomala UBC 951])

HSP 1 Score: 214.2 bits (544), Expect = 6.700e-52
Identity = 109/271 (40.22%), Postives = 160/271 (59.04%), Query Frame = 0
Query:   81 DSSSTFKRDGGRFEITYMGGPVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGATAT-NRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDGPLCL---LGLQGDEHMSAQWILGDVFLRKYYSAYDYKNKRVGLALA 348
            DSSS++K++G  F I Y  G + GY++ DT+T+G   ++ Q FA+ T+  GL  ++  G +DG+LGL +D ISV   + PF+ +I Q  K + +P FAFYLG   +  GE   GG D SHY G++ + P+    GYW V LD+V  G +D +     A +D+G SLI  P    + + + +GAT + N  YT+DC K K++P + F  DG+ Y L  +DY++     CL   +GL    ++   WI+GDVFLRKYY+ YD     VG A A
Sbjct:  100 DSSSSYKQNGSSFSIQYGSGAMEGYVSSDTLTIGDLRIKKQDFAEATSEPGLAFAF--GKFDGILGLAYDTISVNGIVPPFYQMINQ--KLIDQPQFAFYLGSSDSDGGEAVFGGVDESHYTGKITYAPVRR-KGYWEVSLDKVSFGDEDMELDNAGAAIDTGTSLIALPTDVAEILNKEIGATKSWNGQYTIDCEKVKSLPNLTFTFDGKQYPLGPEDYILNVQGSCLSSFMGLDMPSNLGTLWIVGDVFLRKYYTVYDLGKNAVGFAKA 365          
BLAST of NO15G01050 vs. NCBI_GenBank
Match: XP_002292244.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90219.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 210.7 bits (535), Expect = 7.400e-51
Identity = 112/266 (42.11%), Postives = 158/266 (59.40%), Query Frame = 0
Query:   83 SSTFKRDGGRFEITYMGGPVSGYLAEDTVTLG-GYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFDEISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSHYLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGPKRDVDAIAEGLGATAT-NRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYVIEDGPLCLLGLQG-DEHMSAQWILGDVFLRKYYSAYDYKNKRVGLA 346
            S+++K DG  F I Y  G V GY + DTVTL     + +Q FA+++N  GLG  Y+ G +DG+LGLGF+ +S+    T F N I Q  K + +PVFAF LG      GELT+GG D S + G + W+PL EP  YW + ++ +  G+  S +     ++DSG SLI GP   +  IA  +GA       YT+DC K   +P +EF ++GQ + +   D VIE    CL  + G D     QWILGDVF+RK+Y+ +DY+N++VGLA
Sbjct:   75 STSYKADGSDFHIQYGSGDVQGYFSVDTVTLADDIVITDQKFAEVSNAGGLGVGYIMGQFDGILGLGFEGLSLGGAKTVFKNAIDQ--KVVAQPVFAFSLGDNAD--GELTLGGYDDSKFKGDITWIPLSEPK-YWQIDIEDITAGSYSSGTTN--GIVDSGTSLITGPSTSIIKIALSVGAMPNIMGQYTIDCAKVPNLPDLEFKINGQVWKVPGKDLVIESAGTCLFAMMGMDIPTGPQWILGDVFMRKFYTIFDYENQKVGLA 333          
The following BLAST results are available for this feature:
BLAST of NO15G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22434.11.700e-11653.67lysosomal aspartic protease [Nannochloropsis gadit... [more]
EWM22250.13.200e-6247.60aspartic protease [Nannochloropsis gaditana][more]
CBJ29800.18.200e-5844.85aspartyl protease [Ectocarpus siliculosus][more]
XP_005853900.14.500e-5647.98cathepsin D [Nannochloropsis gaditana CCMP526] >EK... [more]
CEL99302.12.200e-5543.17unnamed protein product [Vitrella brassicaformis C... [more]
XP_009535957.11.000e-5244.93hypothetical protein PHYSODRAFT_352787 [Phytophtho... [more]
OLP88390.11.800e-5243.43Lysosomal aspartic protease [Symbiodinium microadr... [more]
XP_002184476.15.100e-5241.09predicted protein, partial [Phaeodactylum tricornu... [more]
XP_013244720.16.700e-5240.22putative PEP4-aspartyl protease [Tilletiaria anoma... [more]
XP_002292244.17.400e-5142.11predicted protein [Thalassiosira pseudonana CCMP13... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL148nonsL148Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001503NSK001503Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01050.1NO15G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01050.1NO15G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01050 ID=NO15G01050|Name=NO15G01050|organism=Nannochloropsis oceanica|type=gene|length=1178bp
ATGCAGGAGGGTCGTAACAAGCAGCTTTTGCTGCTCCTGGCGACAATCAC
ATCATCTATAGGGGCCACTGCCATTGCGATGGCCGAGAGAGATTCTCCTC
CCACCCTTGAGCCAACCCTAATGCGCATCCCCCTGGCCAAGGTGGCTCTG
CCTCCCCGCGGTGTCCATCACCGGCAACGTGGCCTGGCAGAAAAGGGGGA
GATCATCTTGAGAGATGTCTACCAGGATGTAGCCTACACAGgtgtgattg
gtattgggaccccccccgtgagttcaccgtcatcttcgatacgggcagca
gcgacctgtgggtgccctcggccctgtgcaaagtatgtggccaccgcaat
aagtataattcagACTCCTCATCGACCTTCAAGAGGGATGGGGGTCGCTT
TGAGATCACATACATGGGAGGCCCTGTCTCCGGCTACCTGGCTGAGGACA
CGGTCACCTTAGGTGGTTATGCCGTAAGGAATCAGACGTTTGCCCAGATC
ACCAACCCCTTGGGCCTGGGGACTAGCTACTTGGGAGGGGGATACGACGG
CGTTTTGGGATTGGGATTTGACGAGATTTCAGTGGCCAATACTATAACAC
CTTTTCATAATTTGATCCAGCAGCAGGGCAAGGCGCTGCCCGAGCCGGTG
TTTGCTTTTTATTTGGGAGGGGAGGGAGCGGGGCTGGGCGAGCTGACGGT
GGGCGGCACCGACCCAAGTCATTACTTAGGACAATTGCATTGGGTGCCCT
TAGAGGAACCGCCGGGGTACTGGGCTGTTGGGTTGGATAGGGTGCATCTG
GGAGCACAGGATTCTCAGAGCAAGGCACACCTGGCAGTGATGGACTCGGG
CGCATCCCTTATTATTGGGCCGAAGCGGGACGTGGATGCCATAGCCGAGG
GACTCGGGGCAACGGCCACGAATCGAATTTATACGGTGGATTGTGGAAAG
AGGAAAACGATGCCGACAATAGAGTTTGTGGTCGATGGGCAGCCCTATGC
TTTAAATGCGGACGATTACGTGATAGAGGATGGGCCTTTGTGCCTATTGG
GGCTGCAGGGCGACGAGCACATGAGCGCTCAGTGGATACTGGGGGATGTA
TTTTTGCGAAAGTATTACTCGGCCTATGATTATAAGAATAAGCGGGTTGG
TTTGGCGTTGGCTACTAAGGGCTCTTAA
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protein sequence of NO15G01050.1

>NO15G01050.1-protein ID=NO15G01050.1-protein|Name=NO15G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MQEGRNKQLLLLLATITSSIGATAIAMAERDSPPTLEPTLMRIPLAKVAL
PPRGVHHRQRGLAEKGEIILRDVYQDVAYTDSSSTFKRDGGRFEITYMGG
PVSGYLAEDTVTLGGYAVRNQTFAQITNPLGLGTSYLGGGYDGVLGLGFD
EISVANTITPFHNLIQQQGKALPEPVFAFYLGGEGAGLGELTVGGTDPSH
YLGQLHWVPLEEPPGYWAVGLDRVHLGAQDSQSKAHLAVMDSGASLIIGP
KRDVDAIAEGLGATATNRIYTVDCGKRKTMPTIEFVVDGQPYALNADDYV
IEDGPLCLLGLQGDEHMSAQWILGDVFLRKYYSAYDYKNKRVGLALATKG
S*
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