NO15G00940, NO15G00940 (gene) Nannochloropsis oceanica

Overview
NameNO15G00940
Unique NameNO15G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1464
Alignment locationchr15:284496..285959 +

Link to JBrowse

Properties
Property NameValue
DescriptionTyrosine--tRNA ligase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:284496..285959 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006437tyrosyl-tRNA aminoacylation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0003723RNA binding
GO:0004831tyrosine-tRNA ligase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0003723RNA binding
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR024088Tyr-tRNA-ligase_bac-type
IPR002305aa-tRNA-synth_Ic
IPR002942S4_RNA-bd
IPR002307Tyr-tRNA-ligase
Homology
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BLAST of NO15G00940 vs. NCBI_GenBank
Match: EWM22497.1 (tyrosyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 762.7 bits (1968), Expect = 7.000e-217
Identity = 393/488 (80.53%), Postives = 430/488 (88.11%), Query Frame = 0 
Query:    1 MLFLAFARKTTTAWR--IPLSYSSSLSSTIRWATALSDKSLTPSRRTITILSSIPAPETDISAQGQVLPTSFKSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGEGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASFIKPEIMLSAGKKKHGIVELS 487
            M+FLA   K +T  +   PL   ++  S  R   +      +P R  +T LSS   P T  ++  Q +PT F+S+FLQTLS RGYIHQCTDFKALDEACAAG+PIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYE IQ NI SIS VFR+FL FG+G T+ALLVNND+WLS +RYLDFLRDYGQHFTINRMLNF+SVK+RL+RESPLSFLEFNYMILQAYDFLELSRR+ ARLQLGGSDQWGNIINGVELARKVDG+HLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEY+YWQFWRNTNDADVTRFLKLFTE+PL+KIEELARLEGA INEAKVILADEATKLLHGEECL EIHATVANLF+GG ++ T ALPRVVV K+ELGDAG+QVAELFVRL+++KSKAEARRLIKGGGARLNGE IK+ETFVVT  SF KPEIMLSAGKKKHG+VELS
Sbjct:   55 MVFLAIGSKASTIQQSSTPLCAFAARLSLQRPIVSHRINLRSPQRSRLTALSSNAEPAT--ASANQAIPTDFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDKPEIMLSAGKKKHGMVELS 540
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BLAST of NO15G00940 vs. NCBI_GenBank
Match: CBN77340.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 562.8 bits (1449), Expect = 1.100e-156
Identity = 278/447 (62.19%), Postives = 350/447 (78.30%), Query Frame = 0 
Query:   38 SLTPSRRTITILSSIPAPETDISAQGQVLPTSFKSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGEGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASFI-KPEIMLSAGKKKHGIV 484
            S T   R + + S   A    + A+      S +S FLQTL  RG+ HQCT+ + LDE   AGE + AYLGFDATA SLHVGSLLQIMILRHLQK+GH+P+VL+GGGTTK+GDPSGKDEAR+L+    IQRNID +++VF +FL FG+GPT+A LVNN++WL+ + YLDFLR+YG HFTINRM+ +DSV++RLERE PL+FLEFNYM+LQAYDF EL RR+   LQ+GGSDQWGN++NGV+L R+V+   LF LTAPL+TTS+GKKMGK+A+GA+WL  E L EY+YWQFWRNT+DADV RFLKLFTE+ +D+I +L +L GA INEAK++LADE TKLLHGE CL EIH TV  +F+GG   S  ALPR  +  AE  +AGM V +LF+RLE++K+K+E RRLIKGGGA+LN + I DE FVV  ++F  K E+ LS+GKK+HGI+
Sbjct:   77 SRTRVGRLLAVESETVAVPASVMAEANE-AVSVESPFLQTLVERGFYHQCTNVEGLDEKLRAGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDEARQLLDDAAIQRNIDGLASVFSKFLTFGDGPTDAKLVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSAAGAIWLNAEKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEILKLEQLTGAGINEAKIVLADETTKLLHGEACLKEIHQTVKQVFAGGVGGSNAALPRAKIESAE-AEAGMAVVDLFIRLELAKTKSEVRRLIKGGGAKLNDQKIVDEGFVVDLSTFDGKDELKLSSGKKRHGII 521
[Close]
BLAST of NO15G00940 vs. NCBI_GenBank
Match: GAX28922.1 (tyrosyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 551.6 bits (1420), Expect = 2.500e-153
Identity = 278/421 (66.03%), Postives = 342/421 (81.24%), Query Frame = 0 
Query:   68 TSFKSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFG-EGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARL-NGEAIKDETFVVTAASF-IKPEIMLSAGKKKHGIVEL 486
            +  KS FLQTL  RG++HQCT    LD     G   AAYLGFDATA SLHVGSLLQIMILRHLQKSGHKP+VL+GGGTTKVGDP+GKDE+R ++T E IQ+NI+ IS+VF++FL FG E  T+A++VNNDDWLS ++YL FLRDYG HFTINRML+F+SVK RL RE+PLSFLEFNYMILQAYDFLEL RR+N  LQLGGSDQWGN+++G EL R+++G  LF LTAPLMTTSDGKKMGKTA+GAVWL    LSEY+YWQFWRNT D DV +FLKLFTE+PL++I EL +L+GA IN+AK++LADEAT LLHG+ECL  IH TV  +F+G G +STE+LPRVVV   +L + GM++A++FV L ++ +K EARRLI+GGGARL + + ++DE+ ++T A F    EI L AGKK+ G+VEL
Sbjct:   74 SKIKSPFLQTLRDRGFLHQCTGISELDAKLCEGTQ-AAYLGFDATADSLHVGSLLQIMILRHLQKSGHKPIVLVGGGTTKVGDPTGKDESRAMLTEEAIQKNIEGISSVFQKFLVFGDENRTDAMIVNNDDWLSELKYLQFLRDYGTHFTINRMLSFESVKQRLAREAPLSFLEFNYMILQAYDFLELYRRYNTILQLGGSDQWGNMVSGTELGRRIEGAQLFALTAPLMTTSDGKKMGKTANGAVWLNSSKLSEYDYWQFWRNTADDDVVKFLKLFTELPLEQIAELEKLQGADINKAKIVLADEATALLHGKECLPVIHETVKTMFAGSG-ESTESLPRVVVETTDL-EKGMRLADIFVDLGLASTKKEARRLIQGGGARLGDSKKVEDESAMLTLADFGDAKEITLRAGKKRAGVVEL 491
[Close]
BLAST of NO15G00940 vs. NCBI_GenBank
Match: GAX16083.1 (tyrosyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 550.4 bits (1417), Expect = 5.500e-153
Identity = 283/438 (64.61%), Postives = 348/438 (79.45%), Query Frame = 0 
Query:   50 SSIPAPETDISAQGQVLPTSFKSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGE-GPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARL-NGEAIKDETFVVTAASF-IKPEIMLSAGKKKHGIVE 485
            SSI A E D  ++        KS FLQTL  RG++HQCT    LD     G   AAYLGFDATA SLHVGSLLQIMILRHLQKSGHKP+VL+GGGTTKVGDP+GKDE+R ++T E IQ+NI+ IS+VF++FL FG+  PT+A+ VNNDDWLS ++YL FLRDYG HFTINRML+F+SVK RL RE+PLSFLEFNYMILQAYDFLEL RR+N  LQLGGSDQWGN+++G EL R+++G  LF LTAPLMTTSDGKKMGKTA+GAVWL    LSEY+YWQFWRNT D DV +FLKLFTE+PL++I EL +L+GA IN+AK++LADEAT LLHG+ECL  IH TV  +F+G G +STE+LPRVVV   +L + GM++A++FV L ++ +K EARRLI+GGGARL + + ++DE+ ++T A F    EI L AGKK+ G+VE
Sbjct:   63 SSIYAREADALSK-------IKSPFLQTLRDRGFLHQCTGITELDAKLCEGTQ-AAYLGFDATADSLHVGSLLQIMILRHLQKSGHKPIVLVGGGTTKVGDPTGKDESRAMLTEEAIQKNIEGISSVFQKFLVFGDTNPTDAVTVNNDDWLSELKYLQFLRDYGTHFTINRMLSFESVKQRLAREAPLSFLEFNYMILQAYDFLELYRRYNTILQLGGSDQWGNMVSGTELGRRIEGAQLFALTAPLMTTSDGKKMGKTANGAVWLNSSKLSEYDYWQFWRNTADDDVVKFLKLFTELPLEQIAELEKLQGADINKAKIVLADEATALLHGKECLPVIHETVKTMFAGSG-ESTESLPRVVVKATDL-EKGMRLADIFVDLGLASTKKEARRLIQGGGARLGDSKKLEDESAMLTLADFGDSKEITLRAGKKRAGVVE 490
[Close]
BLAST of NO15G00940 vs. NCBI_GenBank
Match: XP_002180188.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48379.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 548.9 bits (1413), Expect = 1.600e-152
Identity = 278/440 (63.18%), Postives = 342/440 (77.73%), Query Frame = 0 
Query:   52 IPAPETDISAQGQVLPT--SFKSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFG-EGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASF-IKPEIMLSAGKKKHGIVELSN 488
            +PA +TD S   Q   +  + +S FLQT+  RG++HQCT+ + LD     G P AAYLGFDATA SLHVGSLLQIMILRHLQ+SGH+P+VL+GGGT+KVGDP+GKDE+R L+T E+IQ+N D IS VF+QFL FG E PT+A++VNND+WLS I+YLDFLR YG HFTINRML+F+SVK RL RE+P SFLEFNYMILQAYDFLEL RR    LQLGGSDQWGN+I+G EL RK++   LF LTAPL+TTSDGKKMGKTA+GAVWL    LS Y+YWQFWRNT+DADV RFLKLFTE+PLDK+ EL +L+GA IN+AK++LADEAT LLHG + L  IH T+  +F+GGGSD TE+LPRV   K +L   G++  +L V+L+++ SK EARRLI+GGGARL    I DE  V+    F    E+ L AGKK+ G+VE+ +
Sbjct:   51 VPAADTDSSIYVQEAESLETLQSEFLQTMRDRGFLHQCTNIRDLDAKLCEG-PQAAYLGFDATADSLHVGSLLQIMILRHLQRSGHRPVVLIGGGTSKVGDPTGKDESRVLLTDEIIQQNTDGISKVFQQFLTFGDEKPTDAIMVNNDEWLSEIKYLDFLRTYGTHFTINRMLSFESVKQRLTREAPFSFLEFNYMILQAYDFLELYRRHKTILQLGGSDQWGNMISGTELGRKLESAQLFALTAPLITTSDGKKMGKTANGAVWLNAARLSSYDYWQFWRNTDDADVIRFLKLFTELPLDKVAELEKLQGAEINQAKIVLADEATALLHGSDSLEAIHKTIETMFAGGGSD-TESLPRVYASKTDLETNGVRFLDLLVKLKLANSKKEARRLIQGGGARLGETPIADENGVLILTDFGGATEVTLRAGKKRAGVVEIQD 488
[Close]
BLAST of NO15G00940 vs. NCBI_GenBank
Match: XP_005839755.1 (Tyrosyl-tRNA synthetase [Guillardia theta CCMP2712] >EKX52775.1 Tyrosyl-tRNA synthetase [Guillardia theta CCMP2712])

HSP 1 Score: 545.0 bits (1403), Expect = 2.300e-151
Identity = 268/440 (60.91%), Postives = 347/440 (78.86%), Query Frame = 0 
Query:   48 ILSSIPAPETDISAQGQVLPTSF--KSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGEGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASFIKPEIMLSAGKKKHGIVEL 486
            +L+S+   + +     + L TSF  KS F++ +  RG++H CT+ +ALDE   + E + AYLGFDATA SLHVGSLLQIMILRHLQ+ GHKP+VL+GGGTTKVGDP+GKD++RK+++ + IQ N++ I  VF +FLKFG+GPT+ALLVNND+WLSSIRYLDFLR+YG  FTINRMLNF+SVK+RLERESPL+FLEFNYMILQAYDFLEL+RR+   LQLGGSDQWGN++NGVEL R+ + K +F +TAPL+TTSDGKKMGK+  GAVWL  ++L  Y+YWQFWRNT DADV RFLKLFTE+P++KIEEL++LEGA IN+AK ILADE T++LHGEE L  IH T + LF+ G S + + LP+V + K ++ D G+ + +LF++L  + SK E R+LI+GGG RLN E ++D   ++TA +    +  LS GKKKHG+V L
Sbjct:   58 MLASVAPSDVEKPILEEELITSFDGKSKFIKVMMERGFLHSCTNIEALDEKMTS-ETVKAYLGFDATAKSLHVGSLLQIMILRHLQQCGHKPIVLLGGGTTKVGDPTGKDQSRKMLSDQDIQDNVNGIKTVFEKFLKFGDGPTDALLVNNDEWLSSIRYLDFLREYGPLFTINRMLNFESVKLRLERESPLTFLEFNYMILQAYDFLELNRRYGCSLQLGGSDQWGNMVNGVELTRRANSKQVFAMTAPLITTSDGKKMGKSEGGAVWLNADMLPPYDYWQFWRNTQDADVVRFLKLFTELPMEKIEELSKLEGAAINDAKKILADECTRMLHGEEVLPSIHETASALFA-GKSGNLDDLPKVSISKEDV-DKGIPLIDLFLQLGFASSKNEIRKLIQGGGVRLNDEKVQDVNMMLTADALNNNQAKLSVGKKKHGLVVL 494
[Close]
BLAST of NO15G00940 vs. NCBI_GenBank
Match: XP_005839756.1 (tyrosyl-tRNA synthetase [Guillardia theta CCMP2712] >EKX52776.1 tyrosyl-tRNA synthetase [Guillardia theta CCMP2712])

HSP 1 Score: 545.0 bits (1403), Expect = 2.300e-151
Identity = 268/440 (60.91%), Postives = 347/440 (78.86%), Query Frame = 0 
Query:   48 ILSSIPAPETDISAQGQVLPTSF--KSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGEGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASFIKPEIMLSAGKKKHGIVEL 486
            +L+S+   + +     + L TSF  KS F++ +  RG++H CT+ +ALDE   + E + AYLGFDATA SLHVGSLLQIMILRHLQ+ GHKP+VL+GGGTTKVGDP+GKD++RK+++ + IQ N++ I  VF +FLKFG+GPT+ALLVNND+WLSSIRYLDFLR+YG  FTINRMLNF+SVK+RLERESPL+FLEFNYMILQAYDFLEL+RR+   LQLGGSDQWGN++NGVEL R+ + K +F +TAPL+TTSDGKKMGK+  GAVWL  ++L  Y+YWQFWRNT DADV RFLKLFTE+P++KIEEL++LEGA IN+AK ILADE T++LHGEE L  IH T + LF+ G S + + LP+V + K ++ D G+ + +LF++L  + SK E R+LI+GGG RLN E ++D   ++TA +    +  LS GKKKHG+V L
Sbjct:    1 MLASVAPSDVEKPILEEELITSFDGKSKFIKVMMERGFLHSCTNIEALDEKMTS-ETVKAYLGFDATAKSLHVGSLLQIMILRHLQQCGHKPIVLLGGGTTKVGDPTGKDQSRKMLSDQDIQDNVNGIKTVFEKFLKFGDGPTDALLVNNDEWLSSIRYLDFLREYGPLFTINRMLNFESVKLRLERESPLTFLEFNYMILQAYDFLELNRRYGCSLQLGGSDQWGNMVNGVELTRRANSKQVFAMTAPLITTSDGKKMGKSEGGAVWLNADMLPPYDYWQFWRNTQDADVVRFLKLFTELPMEKIEELSKLEGAAINDAKKILADECTRMLHGEEVLPSIHETASALFA-GKSGNLDDLPKVSISKEDV-DKGIPLIDLFLQLGFASSKNEIRKLIQGGGVRLNDEKVQDVNMMLTADALNNNQAKLSVGKKKHGLVVL 437
[Close]
BLAST of NO15G00940 vs. NCBI_GenBank
Match: CEM05568.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 529.3 bits (1362), Expect = 1.300e-146
Identity = 263/420 (62.62%), Postives = 332/420 (79.05%), Query Frame = 0 
Query:   68 TSFKSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGEGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAEL-GDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASFI-KPEIMLSAGKKKHGIVEL 486
            TS++S FL+TL  RG+I+Q TD + LDE  +  E ++AYLGFDATA SLHVGSL+QIMILRHLQ+ GHKP+VL+GGGTTKVGDPSGKDEAR +++ E I  NI SI+A+FR+FL FG+GPT+A+LVNNDDWLS + YL FLRD+G  F++N ML  +SVK RL+RE PLSFLEFNYMILQAYDFLEL RR+  RLQ+GGSDQWGNI+ GVEL  ++  + +FGLTAPL+TTSDGKKMGKTA GAVWL  + LS Y+YWQFWRNT+DAD  RFLKLFTE+P+D+I ELA+L+GA IN+AK++LADEAT LLHG   L  IH  VA++F+  G  ST++LPR+ V + +L    G+++ EL  +L+ +K+K++ARRLI GGGARLN   + D   V+    F    ++ LSAGKKKHGIV+L
Sbjct:   68 TSYRSKFLRTLHERGFIYQGTDLQHLDELMSQ-ETVSAYLGFDATADSLHVGSLVQIMILRHLQQCGHKPVVLLGGGTTKVGDPSGKDEARAMLSEEAIDSNIQSIAAIFRKFLSFGDGPTDAMLVNNDDWLSGLSYLCFLRDFGSCFSVNAMLRRESVKSRLDREQPLSFLEFNYMILQAYDFLELHRRYGVRLQMGGSDQWGNIVQGVELNARMGSEKVFGLTAPLITTSDGKKMGKTAEGAVWLTADKLSPYDYWQFWRNTDDADTIRFLKLFTEVPMDQIAELAQLQGADINQAKIVLADEATGLLHGRAALPAIHQAVASVFNTKGQGSTDSLPRLHVSEGQLASQEGVRLVELLQQLDFAKTKSDARRLILGGGARLNDAKVDDVNRVLVLGDFNGGSQVKLSAGKKKHGIVQL 486
[Close]
BLAST of NO15G00940 vs. NCBI_GenBank
Match: XP_002296620.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87316.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 525.4 bits (1352), Expect = 1.900e-145
Identity = 263/414 (63.53%), Postives = 331/414 (79.95%), Query Frame = 0 
Query:   81 RGYIHQCTDFKALD----EACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGE-GPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGS--DSTEALPRVVVGKAEL-GDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASF-IKPEIMLSAGKKKHGIVEL 486
            RG++ QCT+   LD    EA +  E ++AYLGFDATA SLHVGSLLQIMILRHLQ+SGH+P+VL+GGGT+KVGDP+GKDE+R ++  ++I++N D IS VF++FL FGE    EA++VNND+WLS ++YL FLRDYG HFTINRM++F+SVK RL RE+P SFLEFNYMILQAYDFLEL+RR+NA+LQLGGSDQWGN+I+G EL R+VDGK L+ LTAPL+TTSDGKKMGKTA GAVWL  + LSEY+YWQFWRNT+D DV RFLKLFTE+ L++IE++A  +GA IN+AKV+LADEAT LLHG ECL+ IH T+  +F GG S   STE L R+ V + EL    G++V +LFV+L ++ SK EARRL++GGGA+L  E I+DE  V+    F  K E+ L AGKK+ G+VEL
Sbjct:    4 RGFLFQCTNLSELDALLTEATSKNEAVSAYLGFDATADSLHVGSLLQIMILRHLQQSGHRPIVLIGGGTSKVGDPTGKDESRIMLNDDIIKKNTDGISQVFQKFLTFGEKSVEEAIMVNNDEWLSDLKYLQFLRDYGTHFTINRMMSFESVKQRLAREAPFSFLEFNYMILQAYDFLELNRRYNAQLQLGGSDQWGNMISGCELGRRVDGKQLYALTAPLITTSDGKKMGKTAGGAVWLNADKLSEYDYWQFWRNTSDEDVIRFLKLFTELSLEEIEKMAEWQGADINKAKVVLADEATALLHGRECLAAIHDTIDTMFKGGKSAEASTEGLARIFVSEDELNAKDGVKVIDLFVKLGLASSKKEARRLVQGGGAKLGEEKIEDEFAVIAKDDFDEKNELTLRAGKKRAGVVEL 417
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BLAST of NO15G00940 vs. NCBI_GenBank
Match: WP_097277100.1 (tyrosine--tRNA ligase [Caenispirillum bisanense] >SOD89328.1 tyrosyl-tRNA synthetase [Caenispirillum bisanense])

HSP 1 Score: 517.3 bits (1331), Expect = 5.100e-143
Identity = 256/414 (61.84%), Postives = 318/414 (76.81%), Query Frame = 0 
Query:   71 KSTFLQTLSTRGYIHQCTDFKALDEACAAGEPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGEGPTEALLVNNDDWLSSIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYDFLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDKIEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSDSTEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLNGEAIKDETFVVTAASFIKPEIMLSAGKKKHGIVE 485
            +S F++T+  RGY+HQCTD +ALD    AG  + AY+GFD TA SLHVGSL+QIM+LR LQ++GHKP+VLMGGGTT++GDPSG+DEAR+L+T E I  N+  I  VF ++L FG+GPT+A++VNN DWL+ ++Y+DFLRDYG+HF+INRML+FDSVK+RLERE  LSFLEFNYMILQAYDFLEL+R     LQ+GGSDQWGNI+NGVEL R+ D K +FGLT+PL+TT+ G KMGKTASGAVWL  E LS Y+YWQFWRNT DADV +FL+LFTE+PLD+I  L  L+GA IN+AK +LADE T+L HG E       T    F  GG+     LP V V +AEL +AG+ + +L VRLEM+ SK EARRLIK GGAR+N  A+ DE   VT A+     I LSAGKKKH +V+
Sbjct:    5 RSEFIRTVVERGYLHQCTDIEALDAKMQAG-IVPAYIGFDCTADSLHVGSLIQIMLLRRLQQAGHKPVVLMGGGTTRIGDPSGRDEARQLLTDEKIAENMAGIKKVFAKYLTFGDGPTDAVMVNNADWLNGLQYIDFLRDYGRHFSINRMLSFDSVKLRLEREHSLSFLEFNYMILQAYDFLELNRSRGVGLQMGGSDQWGNIVNGVELTRRCDAKEVFGLTSPLLTTASGAKMGKTASGAVWLNAERLSAYDYWQFWRNTEDADVGKFLRLFTELPLDEIARLEGLQGAEINDAKKVLADEVTRLCHGTEAAEAARRTAEETFEKGGAGGD--LPTVEVPRAEL-EAGVALVDLLVRLEMTASKGEARRLIKQGGARVNDAAVTDEAHTVTLAALDGDHIKLSAGKKKHALVK 414
The following BLAST results are available for this feature:
BLAST of NO15G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22497.17.000e-21780.53tyrosyl-trna synthetase [Nannochloropsis gaditana][more]
CBN77340.11.100e-15662.19conserved unknown protein [Ectocarpus siliculosus][more]
GAX28922.12.500e-15366.03tyrosyl-tRNA synthetase [Fistulifera solaris][more]
GAX16083.15.500e-15364.61tyrosyl-tRNA synthetase [Fistulifera solaris][more]
XP_002180188.11.600e-15263.18predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_005839755.12.300e-15160.91Tyrosyl-tRNA synthetase [Guillardia theta CCMP2712... [more]
XP_005839756.12.300e-15160.91tyrosyl-tRNA synthetase [Guillardia theta CCMP2712... [more]
CEM05568.11.300e-14662.62unnamed protein product [Vitrella brassicaformis C... [more]
XP_002296620.11.900e-14563.53predicted protein [Thalassiosira pseudonana CCMP13... [more]
WP_097277100.15.100e-14361.84tyrosine--tRNA ligase [Caenispirillum bisanense] >... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL148nonsL148Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001513NSK001513Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00940.1NO15G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587304gene_4639Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g15gene7945Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00940.1NO15G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00940 ID=NO15G00940|Name=NO15G00940|organism=Nannochloropsis oceanica|type=gene|length=1464bp
ATGCTCTTTCTCGCCTTTGCCCGCAAGACTACGACTGCCTGGCGAATCCC
CTTATCCTACTCATCTTCCCTGTCCAGCACTATCCGTTGGGCAACCGCCT
TGTCCGACAAATCTCTTACACCCTCAAGACGCACTATTACAATCCTAAGC
AGCATTCCCGCCCCCGAGACGGATATCTCCGCCCAAGGCCAAGTATTACC
GACAAGTTTCAAATCCACGTTCCTCCAAACACTGAGTACGCGAGGCTACA
TCCATCAGTGCACGGATTTCAAAGCCTTGGACGAGGCGTGTGCGGCAGGG
GAACCTATCGCGGCTTACCTAGGATTTGATGCCACTGCCCCCAGCCTTCA
CGTGGGCAGCTTGCTTCAAATCATGATCCTACGACATCTGCAGAAATCGG
GGCATAAACCCTTGGTTCTCATGGGAGGGGGAACGACCAAGGTGGGGGAC
CCATCCGGGAAGGACGAGGCGAGGAAGCTGATGACCTATGAGGTGATTCA
GAGAAATATCGACTCCATCTCTGCGGTCTTTCGCCAATTTTTGAAGTTTG
GGGAGGGGCCGACGGAGGCACTGTTGGTGAACAACGACGATTGGCTGTCA
TCGATTCGGTATCTTGACTTTTTGAGGGACTACGGACAGCACTTCACGAT
CAATCGGATGTTGAATTTTGATAGTGTAAAGGTGAGGTTGGAGAGGGAGA
GTCCTCTGTCTTTCCTCGAGTTCAATTACATGATCTTGCAGGCGTACGAC
TTTTTGGAATTGTCAAGACGATTCAATGCTAGATTGCAGTTAGGCGGGTC
AGACCAGTGGGGAAACATCATTAATGGGGTGGAGCTGGCGAGGAAGGTGG
ATGGGAAGCATTTGTTTGGGCTGACGGCCCCCTTGATGACCACGTCGGAT
GGGAAGAAGATGGGGAAGACCGCGAGCGGAGCAGTCTGGCTGAAGAAAGA
GTTGTTGAGTGAGTATGAGTATTGGCAGTTTTGGCGGAACACGAACGACG
CGGACGTGACGCGTTTTCTGAAATTGTTTACCGAGATGCCTTTAGACAAG
ATTGAGGAGCTTGCACGATTGGAGGGAGCCAGGATCAATGAAGCAAAGGT
GATTCTGGCGGACGAGGCGACCAAATTGCTGCATGGAGAGGAATGTTTGT
CTGAGATTCATGCAACAGTCGCCAATTTATTCTCAGGCGGTGGCTCGGAT
AGCACGGAGGCCTTGCCGCGGGTGGTGGTGGGAAAGGCCGAGCTGGGCGA
CGCAGGCATGCAAGTGGCGGAATTATTTGTGCGTCTTGAGATGTCCAAGT
CCAAAGCGGAGGCCCGAAGGCTTATTAAGGGAGGAGGGGCACGGTTGAAT
GGGGAGGCGATCAAGGATGAGACCTTTGTAGTGACAGCAGCCAGCTTTAT
CAAGCCGGAAATTATGCTGAGCGCGGGCAAGAAAAAGCATGGGATTGTGG
AGCTCAGTAATTGA
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protein sequence of NO15G00940.1

>NO15G00940.1-protein ID=NO15G00940.1-protein|Name=NO15G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=488bp
MLFLAFARKTTTAWRIPLSYSSSLSSTIRWATALSDKSLTPSRRTITILS
SIPAPETDISAQGQVLPTSFKSTFLQTLSTRGYIHQCTDFKALDEACAAG
EPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGD
PSGKDEARKLMTYEVIQRNIDSISAVFRQFLKFGEGPTEALLVNNDDWLS
SIRYLDFLRDYGQHFTINRMLNFDSVKVRLERESPLSFLEFNYMILQAYD
FLELSRRFNARLQLGGSDQWGNIINGVELARKVDGKHLFGLTAPLMTTSD
GKKMGKTASGAVWLKKELLSEYEYWQFWRNTNDADVTRFLKLFTEMPLDK
IEELARLEGARINEAKVILADEATKLLHGEECLSEIHATVANLFSGGGSD
STEALPRVVVGKAELGDAGMQVAELFVRLEMSKSKAEARRLIKGGGARLN
GEAIKDETFVVTAASFIKPEIMLSAGKKKHGIVELSN*
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Synonyms
Publications