NO15G00760, NO15G00760 (gene) Nannochloropsis oceanica

Overview
NameNO15G00760
Unique NameNO15G00760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1346
Alignment locationchr15:240895..242240 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:240895..242240 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL148nonsL148Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00760.1NO15G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670417gene_4624Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00760.1NO15G00760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00760 ID=NO15G00760|Name=NO15G00760|organism=Nannochloropsis oceanica|type=gene|length=1346bp
ATGCAGCGTCACCAGGATGGGGCGCGTTCTCTCTTGAGCGGTTGGACCAG
CACCAGCACCATCACCAGCACCAGCACCAGCACCAGCAAATACTGTCGTC
GGATTTACCTTCTTGTGCTTCTGACAGCCCAAGCGgtagaactagcacca
gtgccatgagcaccactagcaccatgaccataccctccttagcaccacgt
caattctcacaccactaagacgagcaagactgctccatctccgtctcagC
CTCCTGCCACTCGCTCCAGCAGCACCACCAGGACCGATAGCAGTACCAGA
AAACGGAGTTACATTGCGCGCTCCCCACCCGCTTCGCCTTATATGCCCTC
CCTCAACCAAAACCTCTTTCCTCCTCCTCCTCCTCCTTCCCCTCCTACTC
CTACTCCTCCTCCTCCTCCTCCTTCCTCCTCCACAGCAGTAGCAGCAGCA
GCAGCGGTGGGGGCGGCAGCAGGAGAAAGATCATCATCAGCAGGATgtga
gcaagagcaataataacaacaacgttttgggtatggagggggaggagata
atggtgagaggaagagaaggggagtgtaaggaggaaaaagacttcagcac
gggtagcagggatagtaacagcaggacctttagcaaggtggggaagaagg
attggggatggaaagagcagacgaggctacaagccctccccatacctccc
tctccttaccccagCTTCAGCGTCCCGTGGGTTGTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCTTCTAATTCTTCTTCCTCCTCCTCC
TCCCCCTTGAGTCCCCTCTTCTCGCCTATGAGGCAAGGTCATGCTTACGC
CTCTCATCCCAACCGCCACGAGCGCGATATGGCCCGTGCTGGTACTGCGG
CTCCTGCTGTGGCTCCTGCTGCTGCTGCTCCTTTCTCAGTGAGAAGACAA
ACAAGTGTGCCTTTGAAATCATTTCCATCTCTCTTCTCTTCCTCTTATGC
GCTTCCTGGTTCTAATACTGCTGCTACTACTGCTGCTACTACTACTTCTG
CTCGGCTTTTCGCGAGACATAGGGAGTCGAATAGAGCGAGTACGCATGGG
AGGGTGGAAGACATCAAGGGGGAGGAGGGGGAGAAGGAGGATGACGAGAC
AGAGGATGATTATGAAGAGGCTCAAATGAAAACTTATCATGCTGACATGC
AACTCGGAAAATTGGAAGAGGGGGTAGGTAAAGCGTGGTGGGAGGAGGAG
GACGAGGGGGTCATTCCTTGCTGCGAGGGGCTATCATGCGGAACGGGCGA
GGTACTACCTGCATCTATTCCACAGCAACAAGTTGTTGGCGGTTGA
back to top

protein sequence of NO15G00760.1

>NO15G00760.1-protein ID=NO15G00760.1-protein|Name=NO15G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MQRHQDGARSLLSGWTSTSTITSTSTSTSKYCRRIYLLVLLTAQAPPATR
SSSTTRTDSSTRKRSYIARSPPASPYMPSLNQNLFPPPPPPSPPTPTPPP
PPPSSSTAVAAAAAVGAAAGERSSSAGSSASRGLSSSSSSSSSSSSSSSN
SSSSSSSPLSPLFSPMRQGHAYASHPNRHERDMARAGTAAPAVAPAAAAP
FSVRRQTSVPLKSFPSLFSSSYALPGSNTAATTAATTTSARLFARHRESN
RASTHGRVEDIKGEEGEKEDDETEDDYEEAQMKTYHADMQLGKLEEGVGK
AWWEEEDEGVIPCCEGLSCGTGEVLPASIPQQQVVGG*
back to top
Synonyms
Publications