jgi.p|Nanoce1779_2|670417, gene_4624 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670417
Unique Namegene_4624
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:226513..235100 +

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Properties
Property NameValue
TranscriptId670503
ProteinId670417
Product nameBestrophin, RFP-TM, chloride channel-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:226513..235100 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046941azetidine-2-carboxylic acid acetyltransferase activity
GO:0043849Ras palmitoyltransferase activity
GO:0043806keto acid formate lyase activity
GO:0043764UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase activity
GO:0043741L-2-aminoadipate N-acetyltransferase activity
GO:0032216glucosaminyl-phosphotidylinositol O-acyltransferase activity
GO:0019707protein-cysteine S-acyltransferase activity
GO:0019706protein-cysteine S-palmitoyltransferase activity
GO:0019705protein-cysteine S-myristoyltransferase activity
GO:0019186acyl-CoA N-acyltransferase activity
GO:0019107myristoyltransferase activity
GO:0019105N-palmitoyltransferase activity
GO:00187133-ketopimelyl-CoA thiolase activity
GO:00187123-hydroxybutyryl-CoA thiolase activity
GO:0018711benzoyl acetate-CoA thiolase activity
GO:0018031peptidyl-lysine N6-palmitoyltransferase activity
GO:0018030peptidyl-lysine N6-myristoyltransferase activity
GO:0016753O-sinapoyltransferase activity
GO:0016752sinapoyltransferase activity
GO:0016751S-succinyltransferase activity
GO:0016750O-succinyltransferase activity
GO:0016749N-succinyltransferase activity
GO:0016748succinyltransferase activity
GO:0016454C-palmitoyltransferase activity
GO:0016420malonyltransferase activity
GO:0016419S-malonyltransferase activity
GO:0016418S-acetyltransferase activity
GO:0016417S-acyltransferase activity
GO:0016416O-palmitoyltransferase activity
GO:0016415octanoyltransferase activity
GO:0016414O-octanoyltransferase activity
GO:0016413O-acetyltransferase activity
GO:0016412serine O-acyltransferase activity
GO:0016411acylglycerol O-acyltransferase activity
GO:0016410N-acyltransferase activity
GO:0016409palmitoyltransferase activity
GO:0016408C-acyltransferase activity
GO:0016407acetyltransferase activity
GO:0016406carnitine O-acyltransferase activity
GO:0008951palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity
GO:0008374O-acyltransferase activity
GO:0008080N-acetyltransferase activity
GO:0004147dihydrolipoamide branched chain acyltransferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00760NO15G00760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670417mRNA_4624-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670417mRNA_4624Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|670417

>mRNA_4624-protein ID=mRNA_4624-protein|Name=jgi.p|Nanoce1779_2|670417|organism=Nannochloropsis oceanica|type=polypeptide|length=1681bp
MLQPFSLLSLQLLQNQTRNLTTARMQYVKISRYTDASDVRHQDGARSLLS
GWTSTSIITSTSTSTSKYCRRIYLLVLLTAQAQQQQRWGRQQEKDHHQQD
VSKSNNNNNVLGMEGEEIMVRGREGECKEEKDFSTGSRGSNSRTFSKRDM
ARAGTAAPAVAPAAAAPFSVRRQTSVPLKSFPSLFSSSYALAGSNTAATT
AATTTSARLFARHRESNRASTHGRVEDIKGEEGEKEDDETEDDYEEAQMK
TYHADMQLGKLEEGVAAPGLTSSDANSSKKRPRHMENNTTPIICPPTVIQ
VFAKLVKTGHRGVCVLLSSRPDAALLALVQGWKSVGGKGKGVMVVADTDK
ATAGPLTGQLRPLAFTDLSSFPLSSSIPAKLGLCVVFRPQEHLSPSILAA
TANSLQGGGLLVLVLPEDGLDLLSLQSSLASSPIAGPLLSLALTLDQGRA
LLTFLDAASEKEMGGTVVMRGGRGRGKTCALGLGLAGAIAFGFSNVFLTA
ETPRKAQGIFRFVLKGFDVMGWKEKEEYEVVVQERQQPEGRREGGTDEIR
PSAAGSGWGREEGKGGGTTAILRINVFREHRQTVQYIYPDDGARLEQAEV
LAIDDAASLSPSLVGNLLGPYLTFVAIQEGGEGGAGPAAAKALMARIIAQ
AGSTAGEVAAAAAAEVRGSQTKKGERQVHEERWRKAAEAVSALGAGRRSV
VEVGMEEPVMWRGKDPVERWVGKMGGLGGREGGGLGLKFGTPAPWECDLF
YCEKATLLSGHAMTELLLERVMYVYGAWARKREGRRVWEVGREGDHLVVL
LGPEAEEQGEKAGLPDILAVIHLREVKGEGGKDGGEEKGWVDVVHVATHP
DVMRMGYGGRAVQLLARHLKGDIASSATTPAVDAAAAAEYGKEKTVTRVM
DSALQPRQILPPVLTSLEERGPFWARSSGSSSSSAPAIPPRMAVVRRVPT
SPSWWIVFWRRAGFRPIAMTAVPSKEEGEEEEGSEEGREASQAVTMALAL
WGGERRGGDEFLAQMEEFQSRVLRLLPSVYAGLGTFTALGLVGGQQQQQR
QQPEVEEDGEETAVATGATAATACPSLLTAEELSFLFTSHDRRRLHTYAS
SLGDPSIISDLLPLLCQLFFQNRLPSLPSSSSSSSSSSSSLPPLQAAILI
GLGMQRKELGALSLELGLPTHQVQAMFNKAVRRLSACLRGIEEGEVEEEM
AAMTAAAPAAARIGQGRMEAGKEAGRKMESLPMRLEEEMEIGAKEVKSRE
REGRREERREEGLLKSLDLMQYAVKGSTAEWEEVLKESKGALQTHGMVQL
KSLKKTGPSVLDQLEEGEAPGEKGGGKKKIKMGGGERGGAQEGRSTLFSS
LSAIPAPDHPPPPPPKRKESAVHFAHWLTTQAFLMTEIRPVLFLNMVFTA
LVAHAYKRGMTGAVDIHPHSLLAGPLGFFLTFRAEKGFDRCEDARKIWDG
VLDTSRDMARCAIGAESLLGSSGPPFPARRLMDLTCAYGILLEEFVTRKQ
RQLELEALLEKRDLEILRLGAANRPLAMTELISEEVVDEAKTSAVFRNSP
YFGRLLEHIDQLSHHVTQVQRLMKPSVPPFFYTHALRFLTLYVFTLPFAL
VDKLPGHALVPAVGILTWALFGLRELGIKAQYPFSSGVVNLKTLWKEVIY
DARVCLEETHQKAEKERAKDESAEGMEKGQ*
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Synonyms
Publications