NO15G00620, NO15G00620 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00620 vs. NCBI_GenBank
Match: ORY39340.1 (hypothetical protein BCR33DRAFT_720170 [Rhizoclosmatium globosum]) HSP 1 Score: 153.3 bits (386), Expect = 1.700e-33 Identity = 80/275 (29.09%), Postives = 141/275 (51.27%), Query Frame = 0
Query: 65 DFRPPPRWLLRLLALPLAMLNPPDARHLEHVIGCLDRN--EKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDAIWPVLHLPLQRLLRPFGTHR-------------------PPTSLPVLLPFNTLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRLREEDRGRYIFGR 319
D++PP +R ++ PL L P +E VI + +N +K++ +GN + GLD + +YL TGI++R + D ++P+ ++ W GGV+ T +N +M+AG+P+L PGG EE K Y+L W +R GF L++KH Y ++P+ +G+ED + +PL+ G HR P LPV+ P+ + +K Y +FG + + ++ E+ + + +R V I +G++++ D RY++ R
Sbjct: 47 DYKPPSILFVRFVSAPLRWLLPLQDEGMEEVINIIKQNPKQKLIFIGNHLIYGLDVVFLVIHIYLETGIYLRGIADTFHFQIPIHKHLVQWFGGVKGTVENCTKLMEAGQPILILPGGAEEVVKDSRIPPYTLIWKDRTGFAKLSVKHGYKIVPYGIVGLEDMVVHAFSIPLKPFFAILGDHRSKDKVFNPAAHKTSIPPPVPDMRLPVIYPYLSFQKSYLVFGEIVDASEY--DLDDIESIYALRNRVRNEVETSIRKGRQIQFVDPQRYLWRR 319
BLAST of NO15G00620 vs. NCBI_GenBank
Match: XP_005789944.1 (hypothetical protein EMIHUDRAFT_225389 [Emiliania huxleyi CCMP1516] >EOD37515.1 hypothetical protein EMIHUDRAFT_225389 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 136.3 bits (342), Expect = 2.100e-28 Identity = 91/260 (35.00%), Postives = 128/260 (49.23%), Query Frame = 0
Query: 61 SNITDFRPPPRWLLRLLALPLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDAIWPVLHLPLQRLLRPFGTHRPPTSLPVLLPFN--TLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRLREEDRGRYIFGR 319
++I F+PPP L L P+ L PD LEHV L V N LLG++ FI LY G+F+R L D M +P +L G V TR+N + +M A + +L +PGG E K KYSL W +RLGF +AIKH Y L+P +++G ED + V LP+ G R SLP+ P + ++K Y+ FG P+ T +F G ++N + D R V I +E D R++ R
Sbjct: 120 ADIAAFQPPPARALAALMAPIEALIRPDITGLEHV-----TETPSLYVMNHSLLGVEMPSFIHALYSRKGVFLRGLADHMHFSLPH-GEVLRALGAVDGTRENVDVLMGARQXVLVYPGGAHEVLKHSATPKYSLLWKQRLGFARMAIKHGYPLVPCAAVGTEDMLSIVADLPV-------GFVRKELSLPLAAPPSPARIQKIYFWFGEPIPTAQFGGDWQNDAFAIEVRDRTRAAVESGIAILLEKQETDPDRFLMER 366
BLAST of NO15G00620 vs. NCBI_GenBank
Match: XP_016609254.1 (hypothetical protein SPPG_04306 [Spizellomyces punctatus DAOM BR117] >KND01215.1 hypothetical protein SPPG_04306 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 123.6 bits (309), Expect = 1.400e-24 Identity = 85/303 (28.05%), Postives = 146/303 (48.18%), Query Frame = 0
Query: 30 WIWHLLPFTDKTREGKKKRRSNGNYSISKNSSNITDFRPPPRWLLRLLALPLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDA--IWPVLHLPLQRLLRPFGTHRPPTSLPVLLPFNTLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRLREED-RGRYIFG---RAFEMLGWG 327
W ++L+ F ++ R RR+ ++ PP ++LR LA + + P ++ V ++N ++L V N LL L+ ++ +YL TG R + D + ++P+ + +L G + + M G LL PGG E ++++ ++KYSLQW +R GF LA++H+YT++P S +G ED I + +P + + R SLP+ LP + E QY+ FG P+ + G +E+ + + R V IE+ R D R R++ R F+ L G
Sbjct: 27 WPFYLVVFLEQHRRATLARRAQ-------------TWQQPPDFILRPLARLVLTIFPVTVQNEAIVAQLTEQNSRILYVENHQLLALELATTLSTVYLLTGRLPRGIMDRVHLKIPLWADLLTALGAINGDPASVADAMAKGHNLLVLPGGHHEVYRKKSDRKYSLQWRKRAGFARLAVQHQYTIVPISGIGCEDMLHILTDVAIPDGFMSKVIRDERKGMSLPICLPV-SYEMQYFRFGRPIRCDKLNGNWEDVDKVWGIREKTRRAVEGGIEKLIAKRSSDGRKRWVASGLVRRFQKLATG 315
BLAST of NO15G00620 vs. NCBI_GenBank
Match: ORY49761.1 (hypothetical protein BCR33DRAFT_713374 [Rhizoclosmatium globosum]) HSP 1 Score: 123.2 bits (308), Expect = 1.900e-24 Identity = 90/309 (29.13%), Postives = 132/309 (42.72%), Query Frame = 0
Query: 62 NITDFRPPPRWLLRLLALPLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDAIWPVLHLPLQRLLRPFGTHR---------------------------------------------------PP---TSLPVLLPFNTLEKQ--YYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRLREEDRGRY 315
+I D+ PP + ++ + PL L P LE++ +N + LLVGN + +D F+T LY TG ++R + D ++P+V L G A +N MM+AG+PLL +PGG E FK Y+L W + GF LA KH YT+IPF+S+G ED + +P L G R PP T +P+ P+ TL Q Y +FG P+ + + E+ + DV R+ V IE GK L+ D R+
Sbjct: 78 DIRDYTPPNTLITKIFSAPLHYLFPMKCEGLENI----PQNGRFLLVGNHQNMIMDSSSFVTSLYFWTGFWIRPMTDRSHYKIPLVKHYLQSVGCFEANPENCAKMMEAGKPLLVYPGGSAEVFKDERIPPYTLVWKDNAGFAKLAAKHGYTIIPFASVGFEDCMKIWFSIPAYYLFSLLGDKRGKSEYEKYMASSXXXXXXXXXXXXXXXXXXXXXXXXMTDPAFKAYSKGYVPPPVADTRIPIYAPW-TLRPQANYVVFGKPIDASAYSP--VDKESVFELRDVTRSAVLQCIERGKELQTADPDRF 379
BLAST of NO15G00620 vs. NCBI_GenBank
Match: ORY49762.1 (hypothetical protein BCR33DRAFT_734548 [Rhizoclosmatium globosum]) HSP 1 Score: 122.5 bits (306), Expect = 3.200e-24 Identity = 74/228 (32.46%), Postives = 108/228 (47.37%), Query Frame = 0
Query: 123 TLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIED--AIW--------------------PVLHLPLQRLLRPFGTHR-----------PPTSLPVLLPFN-TLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRLREEDRGRYIF 317
T +Y +TGI++R D + R+P W GG+ TR+N ET+M+AG PLL +PGG E+ K KY L W + +GF +A KH YT+IPFSS+G ED IW VLH + P H+ P T +PV P+ + Y +FG P+ T F +++E+ DV+R V +E+ K ++ D R +
Sbjct: 8 TYIYWNTGIYLRPFVDKIHFRLPFNKHFFTWLGGIEGTRENCETLMKAGCPLLVYPGGASENLKDERIPKYLLLWKDHVGFAKMAAKHNYTIIPFSSVGFEDMFQIWFSIPSYYIFTLLGDSRAKKERVLHKQASKNTPPPTPHQTFSKGYKAPPFPDTRIPVYAPWTFRPQSNYCVFGTPIETTNFDA--DDSESVFALRDVVRDAVEKCVEQAKEMQVSDTERTFY 233
BLAST of NO15G00620 vs. NCBI_GenBank
Match: WP_052596667.1 (hypothetical protein [Aureispira sp. CCB-QB1]) HSP 1 Score: 121.7 bits (304), Expect = 5.400e-24 Identity = 84/270 (31.11%), Postives = 131/270 (48.52%), Query Frame = 0
Query: 67 RPPPRWLLRLLAL--PLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGL-DQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDA---IW---PVLHLPLQRLLRPFGTHR----PPTSLPVLLPFNTLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRLREEDRGRYIFGRAFEML 324
RP P+ + ++ L PL LN P + + + VL VGN LLG+ D + LY IF L D ++P + G V A+R + +M+ + L FPGG E+FK +GE Y L+W R GF +AI+H+ T++PFS++G E+ +W +L PL LL+ FG + P L P ++ YY FG P+ T+ +KG + EA + +++R V IE+ +R D + +F R +
Sbjct: 6 RPSPKEVKQMFQLFKPLFWLNDP----VFYDADLIPEEGPVLFVGNHTLLGIWDASIMWFKLYNDKDIFTYSLGDRAHFKIPFWRDLAGKFGMVEASRAHCTQLMKDKQYTLVFPGGAREAFKNKGE-AYRLKWNNRAGFAKMAIEHQCTIVPFSAVGAEECYELVWDSEEILSSPLGTLLKQFGARKDMIIPLVKGVGLTPLPKPQRFYYKFGQPILTEPYKGKANDKEAIQELKNIVRNSVEQGIEDLLEIRAHDPNKTLFKRILSQM 270
BLAST of NO15G00620 vs. NCBI_GenBank
Match: WP_075544710.1 (hypothetical protein [Mycobacterium kansasii] >KZS52906.1 hypothetical protein A4G26_19295 [Mycobacterium kansasii]) HSP 1 Score: 117.9 bits (294), Expect = 7.800e-23 Identity = 96/260 (36.92%), Postives = 123/260 (47.31%), Query Frame = 0
Query: 74 LRLLALPLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDAIWPVLH------LPLQRL-LRPFGT-HRPPTSLPV-LLPFNTLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRL----REEDRGRYIFGRAF 321
LRL+ PL +L P +E+V E+ LLVGN LGL + G VR L D +VP +L G V TR+ +M+ GE ++ FPGG E KR+ E +Y L W RLGF LAI+H Y ++PF+S+G E I VL P Q L + GT PP V L P E+QYY FG P+ T F G + A + +R R IEEG L RE D R + GR F
Sbjct: 22 LRLMK-PLRILIKPKVYGIENV-----PTERALLVGNHNTLGLVDAPLLAAELWERGRLVRSLGDHAHFKVPGWRDMLTRMGVVEGTRETASELMRRGELVMVFPGGAREVNKRKNE-QYKLVWKNRLGFARLAIQHGYPIVPFASVGAEHGIDIVLDTDSPLLAPSQFLAAKLLGTPDGPPLVRGVGLTPVPRPERQYYWFGEPIDTTEFAGHEADDNAARK----VRERAAAAIEEGIELMLAEREADPNRSLVGRLF 270
BLAST of NO15G00620 vs. NCBI_GenBank
Match: WP_063471549.1 (hypothetical protein [Mycobacterium kansasii] >KZS72255.1 hypothetical protein A4G29_00815 [Mycobacterium kansasii]) HSP 1 Score: 117.9 bits (294), Expect = 7.800e-23 Identity = 96/260 (36.92%), Postives = 123/260 (47.31%), Query Frame = 0
Query: 74 LRLLALPLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDAIWPVLH------LPLQRL-LRPFGT-HRPPTSLPV-LLPFNTLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRL----REEDRGRYIFGRAF 321
LRL+ PL +L P +E+V E+ LLVGN LGL + G VR L D +VP +L G V TR+ +M+ GE ++ FPGG E KR+ E +Y L W RLGF LAI+H Y ++PF+S+G E I VL P Q L + GT PP V L P E+QYY FG P+ T F G + A + +R R IEEG L RE D R + GR F
Sbjct: 22 LRLMK-PLRILIKPKVYGIENV-----PTERALLVGNHNTLGLVDAPLLAAELWERGRLVRSLGDHAHFKVPGWRDMLTRMGVVEGTRETASELMRRGELVMVFPGGAREVNKRKNE-QYKLVWKNRLGFARLAIQHGYPIVPFASVGAEHGIDIVLDTDSPLLAPSQFLAAKLLGTPDGPPLVRGVGLTPVPRPERQYYWFGEPIDTTEFAGHKADDNAARK----VRERAAAAIEEGIELMLAEREADPNRSLVGRLF 270
BLAST of NO15G00620 vs. NCBI_GenBank
Match: WP_075546729.1 (MULTISPECIES: hypothetical protein [Mycobacterium] >KZS84440.1 hypothetical protein A4G31_01075 [Mycobacterium kansasii] >ORB52641.1 hypothetical protein BST40_08925 [Mycobacterium persicum] >ORB88121.1 hypothetical protein B1T49_01095 [Mycobacterium kansasii] >ORB93400.1 hypothetical protein B1T44_01105 [Mycobacterium kansasii] >ORC00157.1 hypothetical protein B1T48_00955 [Mycobacterium kansasii] >ORC05479.1 hypothetical protein B4U45_01100 [Mycobacterium kansasii]) HSP 1 Score: 117.5 bits (293), Expect = 1.000e-22 Identity = 96/260 (36.92%), Postives = 123/260 (47.31%), Query Frame = 0
Query: 74 LRLLALPLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDAIWPVLH------LPLQRL-LRPFGT-HRPPTSLPV-LLPFNTLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRL----REEDRGRYIFGRAF 321
LRL+ PL +L P +E+V E+ LLVGN LGL + G VR L D ++P +L G V TR+ +M+ GE ++ FPGG E KRR E +Y L W RLGF LAI+H Y ++PF+S+G E I VL P Q L + GT PP V L P E+QYY FG P+ T F G + A + +R R IEEG L RE D R + GR F
Sbjct: 22 LRLMK-PLRILIKPKVYGIENV-----PTERALLVGNHNTLGLVDAPLLAAELWERGRLVRSLGDHAHFKIPGWRDMLTRMGVVEGTREIASELMRRGELVMVFPGGAREVNKRRNE-QYKLVWKNRLGFARLAIQHGYPIVPFASVGAEHGIDIVLDTDSPLLAPSQFLAAKLLGTPDGPPLVRGVGLTPVPRPERQYYWFGEPIDTTEFAGHEADDNAARK----VRERAAAAIEEGIELMLAEREADPNRSLVGRLF 270
BLAST of NO15G00620 vs. NCBI_GenBank
Match: WP_099225465.1 (hypothetical protein [Mycobacterium kansasii]) HSP 1 Score: 117.5 bits (293), Expect = 1.000e-22 Identity = 96/260 (36.92%), Postives = 123/260 (47.31%), Query Frame = 0
Query: 74 LRLLALPLAMLNPPDARHLEHVIGCLDRNEKVLLVGNQCLLGLDQFLFITLLYLHTGIFVRRLHDAMFGRVPMVSSILAWSGGVRATRKNTETMMQAGEPLLFFPGGLEESFKRRGEKKYSLQWGERLGFVMLAIKHEYTLIPFSSLGIEDAIWPVLH------LPLQRL-LRPFGT-HRPPTSLPV-LLPFNTLEKQYYLFGVPLSTKRFKGGYENTEACHQTFDVLRTRVYLLIEEGKRL----REEDRGRYIFGRAF 321
LRL+ PL +L P +E+V E+ LLVGN LGL + G VR L D ++P +L G V TR+ +M+ GE ++ FPGG E KRR E +Y L W RLGF LAI+H Y ++PF+S+G E I VL P Q L + GT PP V L P E+QYY FG P+ T F G + A + +R R IEEG L RE D R + GR F
Sbjct: 22 LRLMK-PLRILIKPKVYGIENV-----PTERALLVGNHNTLGLVDAPLLAAELWERGRLVRSLGDHAHFKIPGWRDMLTRMGVVEGTREIASELMRRGELVMVFPGGAREVNKRRNE-QYKLVWKNRLGFARLAIQHGYPIVPFASVGAEHGIDIVLDTDSPLLAPRQFLAAKLLGTPDGPPLVRGVGLTPVPRPERQYYWFGEPIDTTEFAGHEADDNAARK----VRERAAAAIEEGIELMLAEREADPNRSLVGRLF 270 The following BLAST results are available for this feature:
BLAST of NO15G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00620 ID=NO15G00620|Name=NO15G00620|organism=Nannochloropsis oceanica|type=gene|length=3129bpback to top protein sequence of NO15G00620.1 >NO15G00620.1-protein ID=NO15G00620.1-protein|Name=NO15G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=421bpback to top Synonyms
Publications
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