NO15G00530, NO15G00530 (gene) Nannochloropsis oceanica

Overview
NameNO15G00530
Unique NameNO15G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2007
Alignment locationchr15:172832..174838 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein RecA
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:172832..174838 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008094DNA-dependent ATPase activity
GO:0003677DNA binding
GO:0003697single-stranded DNA binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR023400RecA_C
IPR020588RecA_ATP-bd
IPR020587RecA_monomer-monomer_interface
IPR003593AAA+_ATPase
IPR013765DNA_recomb/repair_RecA
Homology
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_092787662.1 (recombinase RecA [Rhodospira trueperi] >SDE86625.1 recombination protein RecA [Rhodospira trueperi])

HSP 1 Score: 273.9 bits (699), Expect = 1.100e-69
Identity = 150/335 (44.78%), Postives = 219/335 (65.37%), Query Frame = 0
Query:   45 EKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNRN--REERVLSQALRRLTRSAAKSKCLLVCLHH----------SGVHNKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAV 368
            +KQ AL A + +++R  G+G++MRLG ++ + + ESV STGS  LD ALGIGGLP+G +VE+ GP+ SGKTTLA+HV+A+AQKRGGTC FV+ E A DP+YAR++G+D++NL +SQPD  EQ L+I + LV+S A+  +V+DS+  L+  AE+E ++G+ +   + R++SQALR+LT S A+S  L++ ++           S     G   L   S+VRL   R   ++ +   VG + RVKVVKNKVA PF T E D+L+ +GI +LGE+LD+GV   +V+K  AWF              +  S  +GQGRE  R FL++ P +   +ENA+
Sbjct:   15 DKQKALDAAVSQIERSFGKGSIMRLGQRDRIVEIESV-STGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLAMHVVAQAQKRGGTCGFVDAEHAFDPSYARKLGIDLDNLLMSQPDAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTASVARSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKNKDETVGNQTRVKVVKNKVAPPFKTVEFDILYGEGISKLGEILDLGVRASIVEKSGAWF--------------SYNSQRIGQGRENARQFLRDNPAIAEEIENAI 334          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_097277033.1 (recombinase RecA [Caenispirillum bisanense] >SOD89096.1 RecA protein [Caenispirillum bisanense])

HSP 1 Score: 272.3 bits (695), Expect = 3.100e-69
Identity = 147/352 (41.76%), Postives = 223/352 (63.35%), Query Frame = 0
Query:   43 STEKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNRN--REERVLSQALRRLTRSAAKSKCLLVCLHHSGVH----------NKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAVGDRLKTMDSYMRTLP 383
            S +KQ AL A + +++R  G+G++M+LG ++ + D E+ ISTGS  LD ALGIGGLP+G +VE+ GP+ SGKTTLALHV+AEAQKRGG C FV+ E ALDP YAR++GVD+  L ISQPD  EQ L+I + LV+S A+  +V+DS+  L+  AE+E ++G+ +   + R++SQALR+LT S +KS CL++ ++   +             G   L   ++VRL   R  +++     VG + RVKVVKNKVA PF   + D+++ +G+ + GEL+D+GV  G+V+K  +WF              +  S  +GQGRE  + FL++ PE+ + +E  +      +  +M++ P
Sbjct:   13 SMDKQKALDAAVSQIERAFGKGSIMKLGQKDSVVDIEA-ISTGSLGLDLALGIGGLPKGRIVEIYGPESSGKTTLALHVVAEAQKRGGACAFVDAEHALDPVYARKLGVDLNELLISQPDAGEQALEICDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTGSVSKSNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLEIRRVGSIKDRDEVVGNQTRVKVVKNKVAPPFKVVDFDIMYGEGVSKTGELIDLGVKAGIVEKSGSWF--------------SHNSTRIGQGRENAKQFLRDNPEMATEIERTIRQNAGILGDHMQSGP 349          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_027285952.1 (recombinase RecA [Rubritepida flocculans])

HSP 1 Score: 270.8 bits (691), Expect = 9.100e-69
Identity = 148/335 (44.18%), Postives = 218/335 (65.07%), Query Frame = 0
Query:   45 EKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNRN--REERVLSQALRRLTRSAAKSKCLLVCLHHSGVH----------NKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAV 368
            EK  AL A + +++R  G+G++MR+G ++ + D E VISTGS  LD ALGIGGLP+G +VE+ GP+ SGKTTLALHVIAEAQK+GGTC F++ E ALDP YAR++GVDV+NL ISQPD  EQ L+I + LV+S A+  +V+DS+  L+  AE+E ++G+ +     R++SQALR+LT + ++S CLL+ L+   +             G   L   ++VR+   R  +++     +G + RVKVVKNK+A PF   E D+L+ +GI ++GEL+D+GV  G+V+K  AWF               +G+ + GQGRE  + FL++ P +  M+E  +
Sbjct:    2 EKGKALEAALSQIERAFGKGSIMRMGAKSQIEDIE-VISTGSLGLDLALGIGGLPKGRIVEIYGPESSGKTTLALHVIAEAQKKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAALVPKAELEGEMGDSHVGLHARLMSQALRKLTGTVSRSNCLLIFLNQIRLKIGVMFGNPETTTGGNALKFYASVRMEIRRVGSIKEREDTIGNQTRVKVVKNKMAPPFRQVEFDILYGEGISKVGELIDLGVKAGVVEKSGAWF-------------SCDGTRI-GQGRENAKQFLRDNPAMAEMIEKRI 321          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: PCJ75471.1 (recombinase RecA [Rhodobacteraceae bacterium])

HSP 1 Score: 270.8 bits (691), Expect = 9.100e-69
Identity = 148/335 (44.18%), Postives = 214/335 (63.88%), Query Frame = 0
Query:   45 EKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNR--NREERVLSQALRRLTRSAAKSKCLLVCLHH----------SGVHNKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAV 368
            +KQ AL + + +++R  G+G++M+LG  N + D ES  STGS  LD ALGIGGLPQG +VE+ GP+ SGKTTLALHV+AE+QK+GG C FV+ E ALDP+YA+++GVD++ L ISQPD  EQ L+I+E LV+S AV  VV+DS+  L   +E+E D+G+     + R++SQA+R+LT + ++S C+++ ++           S     G   L   ++VRL   R   L+     VG   RVKVVKNKVA PF   E D+++ +GI + GEL+D+GV LGLVDK  +WF              + G   +GQGRE  + FL++ PE+   +E+ +
Sbjct:   18 DKQKALESALSQIERNFGKGSVMKLGQDNAMMDIEST-STGSIGLDIALGIGGLPQGRIVEIYGPESSGKTTLALHVLAESQKKGGICAFVDAEHALDPSYAKKLGVDLDELLISQPDGGEQALEIVETLVRSGAVSVVVVDSVAALTPKSELEGDMGDHQVGAQARLMSQAMRKLTGAISRSNCMVIFINQIRMKIGVMFGSPETTSGGNALKFYASVRLDIRRIGALKDRDEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKRGELIDLGVKLGLVDKAGSWF--------------SYGDERIGQGRENAKTFLKDHPEMALEIEDKI 337          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: PIU07150.1 (recombinase RecA [Methylobacterium sp. CG09_land_8_20_14_0_10_71_15] >PIU15641.1 recombinase RecA [Methylobacterium sp. CG08_land_8_20_14_0_20_71_15])

HSP 1 Score: 270.8 bits (691), Expect = 9.100e-69
Identity = 143/341 (41.94%), Postives = 219/341 (64.22%), Query Frame = 0
Query:   39 FPFFSTEKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNR--NREERVLSQALRRLTRSAAKSKCLLV----------CLHHSGVHNKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAV 368
            FP    +K  A+ A + +++R  G+G++MRLG  + + + E+V STGS  LD ALG+GGLP+G ++E+ GP+ SGKTTLALH IAEAQK+GG C FV+ E ALDP YAR++GV++++L ISQPD  EQ L+I + LV+S A+  +V+DS+  L   AE+E ++G+     + R++SQALR+LT S ++SKC+++           ++ S     G   L   ++VRL   R  T++     +G ++RVKVVKNKVA PF   E D++F +G+ ++GEL+D+GV  G+V+K  AWF              +  S  +GQGRE  + FL++ P++ + +E A+
Sbjct:   11 FPGMDKDKSKAIDAALSQIERAFGKGSIMRLGKSDKVAEVETV-STGSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSQPGLQARLMSQALRKLTGSISRSKCMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRISTIKDRDEAIGNQVRVKVVKNKVAPPFKQVEFDIMFGEGVSKVGELIDLGVKAGIVEKSGAWF--------------SHSSQRLGQGRENAKGFLRDNPDIAAKIEGAI 336          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_056215830.1 (MULTISPECIES: recombinase RecA [Methylobacterium] >KQO66130.1 DNA recombination/repair protein RecA [Methylobacterium sp. Leaf89] >KQO73237.1 DNA recombination/repair protein RecA [Methylobacterium sp. Leaf88] >KQP68794.1 DNA recombination/repair protein RecA [Methylobacterium sp. Leaf111] >KQT81793.1 DNA recombination/repair protein RecA [Methylobacterium sp. Leaf465] >KQU26332.1 DNA recombination/repair protein RecA [Methylobacterium sp. Leaf94])

HSP 1 Score: 270.4 bits (690), Expect = 1.200e-68
Identity = 144/340 (42.35%), Postives = 217/340 (63.82%), Query Frame = 0
Query:   40 PFFSTEKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNR--NREERVLSQALRRLTRSAAKSKCLLV----------CLHHSGVHNKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAV 368
            P    +K  A+ A + +++R  G+G++MRLG  + + + E VISTGS  LD ALG+GGLP+G ++E+ GP+ SGKTTLALH IAEAQK+GG C FV+ E ALDP YAR++GV +++L ISQPD  EQ L+I + LV+S A+  +V+DS+  L   AE+E ++G+     + R++SQALR+LT S ++SKC+++           ++ S     G   L   ++VRL   R  TL+     +G ++RVKVVKNKVA PF   E D++F +G+ ++GEL+D+GV  G+V+K  AWF              +  S  +GQGRE ++ FL++ PE+   +E ++
Sbjct:   12 PMVDKDKAKAIDAALSQIERAFGKGSIMRLGKNDKVAEVE-VISTGSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVQLDDLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSQPGLQARLMSQALRKLTGSISRSKCMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRVSTLKDRDEAIGNQVRVKVVKNKVAPPFKQVEFDIMFGEGVSKVGELIDLGVKAGIVEKSGAWF--------------SYASQRLGQGRENSKGFLRDNPEIAGKIETSI 336          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_066762200.1 (recombinase RecA [Sphingobium sp. CCH11-B1])

HSP 1 Score: 270.4 bits (690), Expect = 1.200e-68
Identity = 151/350 (43.14%), Postives = 218/350 (62.29%), Query Frame = 0
Query:   45 EKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNRN--REERVLSQALRRLTRSAAKSKCLLVCLHHSGVH----------NKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAVGDRLKTMDSYMRTLP 383
            ++Q AL A + ++ R  G+G+ M+LG +  L      ISTGS  LD ALGIGGLP+G ++E+ GP+ SGKTTLALH IAEAQK GGT  FV+ E ALDP YAR++GVD++ L +SQPD  EQ L+I++ LV+S+A+  +V+DS+  L+  AE+E ++G+ +   + R++SQALR+LT S ++SKC+++ ++   +             G   L   ++VRL   R   ++     VG   RVKVVKNKVA PF   E D+++ +GI ++GELLDIGV  GLV+K  AWF              +  S+ +GQGRE  + FL+E PE+   LE A+  R + +   M T P
Sbjct:   17 DRQKALDAALAQIDRAFGKGSAMKLGSREKL--EIEAISTGSLGLDIALGIGGLPKGRIIEVYGPESSGKTTLALHAIAEAQKGGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDRDDIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGELLDIGVKAGLVEKSGAWF--------------SYDSVRIGQGRENAKTFLREHPEMADKLEKAIRGRTEAVAEGMMTGP 350          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_066927127.1 (recombinase RecA [Methylobacterium sp. CCH5-D2])

HSP 1 Score: 270.0 bits (689), Expect = 1.500e-68
Identity = 145/340 (42.65%), Postives = 217/340 (63.82%), Query Frame = 0
Query:   40 PFFSTEKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNR--NREERVLSQALRRLTRSAAKSKCLLV----------CLHHSGVHNKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAV 368
            P    +K  A+ A + +++R  G+G++MRLG    + + E+V STGS  LD ALG+GGLP+G ++E+ GP+ SGKTTLALH IAEAQK+GG C FV+ E ALDP YAR++GV++++L ISQPD  EQ L+I + LV+S A+  +V+DS+  L   AE+E ++G      + R++SQALR+LT S ++SKC+++           ++ S     G   L   ++VRL   R  TL+     +G ++RVKVVKNKVA PF   E D++F +GI ++GEL+D+GV  G+V+K  AWF              +  S  +GQGRE ++ FL++ PE+ + +E A+
Sbjct:   12 PSMDKDKSKAIDAALSQIERAFGKGSIMRLGKNQQVTEVETV-STGSLGLDIALGVGGLPRGRVIEVYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISRSKCMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRVSTLKDRDEAIGNQVRVKVVKNKVAPPFKQVEFDIMFGEGISKVGELIDLGVKAGIVEKSGAWF--------------SHNSQRLGQGRENSKGFLRDNPEVANKIEAAI 336          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_090019385.1 (recombinase RecA [Limimonas halophila] >SDF94569.1 RecA protein [Limimonas halophila])

HSP 1 Score: 270.0 bits (689), Expect = 1.500e-68
Identity = 154/348 (44.25%), Postives = 220/348 (63.22%), Query Frame = 0
Query:   43 STEKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNR--NREERVLSQALRRLTRSAAKSKCLLVCLHH----------SGVHNKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAVGDRLKTMDSYM 379
            ST+KQ AL + + +++R  G+G++MRLG++  + D+E V+STGS  LD ALGIGGLP+G +VE+ GP+ SGKTTLALHV+AE+QK+GGTC F++ E ALDP YAR+VG DVENL ISQPD  EQ L+I + LV+S A+  +V+DS+  L+  AE+E ++G      + R++SQALR+L  S A+S C+++ ++           S     G   L   S+VRL   R  +++      G + +VKVVKNK+A PF   E DV++ +GI + GE+LD+GV  G+V+K  AWF         G R        +GQGRE  + FL+E PE+   LE  V +    + S M
Sbjct:   14 STDKQKALDSALGQIERSFGKGSIMRLGERQSVVDAE-VVSTGSLGLDIALGIGGLPRGRVVEIYGPESSGKTTLALHVVAESQKQGGTCAFIDAEHALDPTYARKVGCDVENLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGESQPGMQARLMSQALRKLASSIARSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSIKDRDTVTGNQTKVKVVKNKMAPPFRQVEFDVMYGEGISKTGEVLDLGVQAGIVEKAGAWF------SYNGKR--------IGQGRENAKKFLKENPEIAQELEGKVRENAGLVASTM 346          
BLAST of NO15G00530 vs. NCBI_GenBank
Match: WP_055662542.1 (recombinase RecA [Jannaschia seosinensis] >CUH30800.1 Recombinase A [Jannaschia seosinensis])

HSP 1 Score: 269.6 bits (688), Expect = 2.000e-68
Identity = 149/337 (44.21%), Postives = 216/337 (64.09%), Query Frame = 0
Query:   43 STEKQIALSATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQGHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVGVDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERDVGNRN--REERVLSQALRRLTRSAAKSKCLLVCLHH----------SGVHNKGAKVLHLRSAVRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDRLGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTRFFLQERPELVSMLENAV 368
            S +KQ AL + + +++R+ G+G++M+LG  NPL + ES  STGS  LD ALGIGGLP+G ++E+ GP+ SGKTTL LHV+AE QK+GG C FV+ E ALDP YAR++GVD++ L ISQPD  EQ L+I + LV+S AV+ VV+DS+  L   +E+E D+G+ +     R++SQA+R+LT S A+SKC+++ ++           S     G   L   S+VRL   R  +++     VG   RVKVVKNKVA PF   E D+++ +GI ++GELLD+GV  G+VDK  AWF              + G   +GQGRE ++ FL++ P +   +E+ +
Sbjct:   14 SADKQKALDSALAQIERQFGKGSIMKLGGDNPLPEIEST-STGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGEQALEITDTLVRSGAVNLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSIARSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSIKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGVVDKSGAWF--------------SYGDERIGQGRENSKQFLRDNPNVALEIEDKI 335          
The following BLAST results are available for this feature:
BLAST of NO15G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_092787662.11.100e-6944.78recombinase RecA [Rhodospira trueperi] >SDE86625.1... [more]
WP_097277033.13.100e-6941.76recombinase RecA [Caenispirillum bisanense] >SOD89... [more]
WP_027285952.19.100e-6944.18recombinase RecA [Rubritepida flocculans][more]
PCJ75471.19.100e-6944.18recombinase RecA [Rhodobacteraceae bacterium][more]
PIU07150.19.100e-6941.94recombinase RecA [Methylobacterium sp. CG09_land_8... [more]
WP_056215830.11.200e-6842.35MULTISPECIES: recombinase RecA [Methylobacterium] ... [more]
WP_066762200.11.200e-6843.14recombinase RecA [Sphingobium sp. CCH11-B1][more]
WP_066927127.11.500e-6842.65recombinase RecA [Methylobacterium sp. CCH5-D2][more]
WP_090019385.11.500e-6844.25recombinase RecA [Limimonas halophila] >SDF94569.1... [more]
WP_055662542.12.000e-6844.21recombinase RecA [Jannaschia seosinensis] >CUH3080... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR040ngnoR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001563NSK001563Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00530.1NO15G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100416g2gene6916Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00530.1NO15G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00530 ID=NO15G00530|Name=NO15G00530|organism=Nannochloropsis oceanica|type=gene|length=2007bp
CTCTTGCTTACAACCTTGCTAATTCAGGAGCATATGCACATCAAAACTAC
AGGTTTTTTTACGTTTTGGGCGGGGTTGCGTCGTGGTTCCTATTTGTTCA
TTAGAAGCTTACCGGCGCGCCTCCTCATCACCAGCCTCCTCCCCCAGTCG
AGAAGCCTCCTTACACGACACGGAACGTGAAAAAGCCACCAAAAAATGTT
GCGGAGGCAAGCCCTCTTCCTAAATCGCACTTGCACATCCCTTATATACC
ATAGCAGTAGGCGTGCTCTTGCCTCCAGCGCCAGTGATGCTTCGTCGCCC
TCCTCCGCATTTCCCTTTTTTTCGACGGAAAAACAAATCGCCTTGTCCGC
TACTATCAAGCGCCTCAAACGAAAGCATGGCCAAGGGGCTCTCATGAGGC
TTGGGGACCAAAATCCTCTCTTTGATAGCGAATCTGTCATTTCCACTGGC
TCTCGAGCCCTTGACCACGCGTTAGGCATCGGTGGGCTGCCTCAGGGCCA
CCTCGTAGAGATGTCTGGCCCGCAGCACTCAGGCAAGACTACCCTTGCAC
TACACGTCATTGCTGAAGCACAAAAACGTGGCGGAACCTGTGTGTTCGTT
AATACCGAACAGGCCTTGGACCCTGCATATGCGCGGCGGGTAGGGGTGGA
CGTCGAGAACCTCTTCATCTCTCAACCGGATGATAGCGAGCAAGGTTTGG
ACATTATCGAACAACTCGTCAAGTCCCATGCAGTGCACTGCGTTGTTATG
GATAGTCTCACTACATTATTGCTGGATGCAGAGGTAGAGAGGGACGTGGG
CAACAGAAATCGAGAAGAAAGGGTGCTCAGTCAGGCCTTACGGAGGCTTA
CGCGCTCAGCAGCAAAGTCGAAATGCCTCCTTGTCTGCCTCCACCATAGC
GGGGTCCACAACAAAGGCGCAAAAGTCCTGCATTTGCGGAGTGCCGTGCG
GCTGGCATTTGTGCGGGGACAGACGCTCCGGGGCGAGACTCATGATGTCG
GATATCGGATACGAGTTAAGGTAGTTAAGAATAAGGTCGCGCGTCCTTTT
GGCACTTCAGAAATCGACGTGCTGTTCGACAAGGGCATAGACCGATTAGG
TGAGCTGCTAGACATAGGAGTGGCCCTAGGACTGGTGGATAAGAAGAAGG
CGTGGTTTGTGCTGAAGGATCTGGCAGGGGGGAAGGGCGGGAGGATGGGA
GCGGAGGGATCGTTGGTCATGGGACAAGGACGGGAAAAGACAAGATTTTT
TTTGCAGGAGCGTCCGGAGTTAGTGTCAATGTTGGAAAATGCTGTTGGGG
ACAGGCTGAAGACGATGGACTCGTACATGAGGACTTTGCCGGCATCGAAG
AGTCGCATTCGTGAAGAGGAGGAGGAGGAAGAAGAAGAGAGGGAGGTTGA
GGTGAGAAATTTGGCAGAAGCGACGGCAGATGCCGAGGCTGTGATGAACC
AGGTAGAGCAAGAAAGGGAGGGGGCATACGCATACCCATTCGAGCAGAAA
TCGGAAAGGGGTCTCCTTTATCGCGCTGGAGGGAAAGACAGCGCTAACGC
ACAGGACCCCTATGTTATCGCTCCGGCGGAGGAAAGATGGAATACTAATG
GACCGACAAGGATGATGGACACTATTGAACATTTTGGCGCAGGTGCGGGC
GGAGAGGGTGTTGATTTAGAAATAGATTACCTGACGGGCGAGGTGAAGAA
TACCAAGGCAGCAGCAGCAGTGGAAGCAGCAGCAGCAGCAGCAGCAGCGG
CGGGGCAGAAGAGGCGCGGAGAAGGGAGCTCGTGAAGCAGTGGATGGAAA
GACAAGGAAATCGAAAACCCTTTTAAAACCTCCTCCACGCTCACAAGTGT
TAGGCGAGTGTGCGTCATTGCATAAACGTAATGTAAAGAAGAGACGAAGA
CCTGGGAAATAACTACAGACTAATGTTTACAACGCGCGGAGGGATGCAAG
GCGGCAAAAGTGATTATTCATGACAACGACAAGAATGAAAACGTGACGAT
GATTGAA
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protein sequence of NO15G00530.1

>NO15G00530.1-protein ID=NO15G00530.1-protein|Name=NO15G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=530bp
MLRRQALFLNRTCTSLIYHSSRRALASSASDASSPSSAFPFFSTEKQIAL
SATIKRLKRKHGQGALMRLGDQNPLFDSESVISTGSRALDHALGIGGLPQ
GHLVEMSGPQHSGKTTLALHVIAEAQKRGGTCVFVNTEQALDPAYARRVG
VDVENLFISQPDDSEQGLDIIEQLVKSHAVHCVVMDSLTTLLLDAEVERD
VGNRNREERVLSQALRRLTRSAAKSKCLLVCLHHSGVHNKGAKVLHLRSA
VRLAFVRGQTLRGETHDVGYRIRVKVVKNKVARPFGTSEIDVLFDKGIDR
LGELLDIGVALGLVDKKKAWFVLKDLAGGKGGRMGAEGSLVMGQGREKTR
FFLQERPELVSMLENAVGDRLKTMDSYMRTLPASKSRIREEEEEEEEERE
VEVRNLAEATADAEAVMNQVEQEREGAYAYPFEQKSERGLLYRAGGKDSA
NAQDPYVIAPAEERWNTNGPTRMMDTIEHFGAGAGGEGVDLEIDYLTGEV
KNTKAAAAVEAAAAAAAAAGQKRRGEGSS*
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Synonyms
Publications