NO15G00350, NO15G00350 (gene) Nannochloropsis oceanica

Overview
NameNO15G00350
Unique NameNO15G00350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4531
Alignment locationchr15:114679..119209 +

Link to JBrowse

Properties
Property NameValue
DescriptionPheromone-regulated membrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:114679..119209 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010619DUF1212
IPR024528DUF3815
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO15G00350 vs. NCBI_GenBank
Match: EWM20797.1 (membrane protein [Nannochloropsis gaditana])

HSP 1 Score: 408.7 bits (1049), Expect = 3.600e-110
Identity = 236/393 (60.05%), Postives = 290/393 (73.79%), Query Frame = 0
Query:  282 GREGQREGKRKETASLRGILQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPWTKKFSDVGDRRGKGXXXXXXXXXXXXXXXXXXXXXXXXXQRTISVEELRNQYVFGTLSSFVLE--EELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLG 673
            G EG  E + +   SL  ++ +  S+GTEDGD SD++R  S+     K +C+C    ++KV+       T+     G+R               XXXXXXXXXXXXXX   + VE++R QYV GTLSS  LE  E +   G ++  E  VIRKEDFLMKLAV+LLSYGCPIPRIE+SMQVLL+T+G+EGSF +LP++MFISFG   +SN+ETHIL VGGGLDVYKLRRVNHLVN I+E RI  LP AI KLDS+IAE  LY+WQ K+ACY IAS CVAPL+F GSL DGLL G VG FAG LWV++D SYI+GK+G+  SA L+SFL T+L+AH+P  C+LAIHFGPI YLLPGWSITS++IEL+TQ+++SGT RMMTALMNALL+GFGLDLG
Sbjct:  226 GEEGGAEEQPEAVGSLTRMVTQKFSKGTEDGDKSDFARFWSALAGFSKKMCACCGWGAKKVF-------TEGIKQFGER----------PYWEEXXXXXXXXXXXXXXXXXMDVEDVRAQYVLGTLSSTHLEGLEGVDRPGGKVGNEAAVIRKEDFLMKLAVSLLSYGCPIPRIEYSMQVLLQTMGMEGSFIILPNIMFISFGSPSASNTETHILPVGGGLDVYKLRRVNHLVNLILEQRIPSLPFAIKKLDSMIAEPPLYSWQVKLACYTIASGCVAPLFFSGSLIDGLLAGFVGIFAGGLWVMADVSYIVGKLGVFASAWLASFLATILAAHIPNTCSLAIHFGPIVYLLPGWSITSSIIELSTQSMISGTVRMMTALMNALLIGFGLDLG 601          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: XP_005853873.1 (pheromone-regulated membrane protein [Nannochloropsis gaditana CCMP526] >EKU22486.1 pheromone-regulated membrane protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 392.9 bits (1008), Expect = 2.100e-105
Identity = 237/427 (55.50%), Postives = 291/427 (68.15%), Query Frame = 0
Query:  282 GREGQREGKRKETASLRGILQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPWTKKFSDVGDRRGKGXXXXXXXXXXXXXXXXXXXXXXXXXQRTISVEELRNQYVFGTLSSFVLE--EELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVI----------------------------------ELATQNVLSGTTRMMTALMNALLLGFGLDLG 673
            G EG  E + +   SL  ++ +  S+GTEDGD SD++R  S+     K +C+C    ++KV+       T+     G+R               XXXXXXXXXXXXXX   + VE++R QYV GTLSS  LE  E +   G ++  E  VIRKEDFLMKLAV+LLSYGCPIPRIE+SMQVLL+T+G+EGSF +LP++MFISFG   +SN+ETHIL VGGGLDVYKLRRVNHLVN I+E RI  LP AI KLDS+IAE  LY+WQ K+ACYAIAS CVAPL+F GSL DGLL G VG FAG LWV++D SYI+GK+G+  SA L+SFL T+L+AH+P  C+LAIHFGPI YLLPGWSITS++I                                  EL+TQ+++SGT RMMTALMNALL+GFGLDLG
Sbjct:  226 GEEGGAEEQPEAVGSLTRMVTQKFSKGTEDGDKSDFARFWSALAGFSKKMCACCGWGAKKVF-------TEGIKQFGER----------PYWEEXXXXXXXXXXXXXXXXXMDVEDVRAQYVLGTLSSTHLEGLEGVDRPGGKVGNEAAVIRKEDFLMKLAVSLLSYGCPIPRIEYSMQVLLQTMGMEGSFIILPNIMFISFGSPSASNTETHILPVGGGLDVYKLRRVNHLVNLILEQRIPSLPFAIKKLDSMIAEPPLYSWQVKLACYAIASGCVAPLFFSGSLIDGLLAGFVGIFAGGLWVMADVSYIVGKLGVFASAWLASFLATILAAHIPNTCSLAIHFGPIVYLLPGWSITSSIIGTSSSCSLVSLLLVQSSVVSSYATISLPFGCTPAELSTQSMISGTVRMMTALMNALLIGFGLDLG 635          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: ORX78797.1 (DUF1212-domain-containing protein, partial [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 157.5 bits (397), Expect = 1.500e-34
Identity = 91/276 (32.97%), Postives = 161/276 (58.33%), Query Frame = 0
Query:  399 RNQYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGKS 675
            R+ +    LS+  LEE++       A    ++ K+D+L  L+ A++++G P  R+E++M +    L +E SF  LP + FISFG A +  S+THIL++  G ++ KL R   +  Q++ +  + +  A   L+ ++ E   Y W  ++  +A+ S  + PL F+G+  D L++G +G   GCL +LS   +    +  IT++I+ SF+ T L +H       ++    +T LLPG S+T++VIEL ++N++SG  R++ AL +A +LGFGL++G +
Sbjct:  129 RSSFADDGLSAAALEEQML----ITANIADLLLKQDYLQVLSKAMVTFGSPAHRLEYNMSLASNALDIESSFAFLPGVAFISFGDADTHTSDTHILKIDRGYNMDKLERTYEISRQVI-YGEMHVEVAYELLEDMMEEPPTYAWWVQILNFAMCSFLICPLAFNGNWIDALISGALGLVVGCLNLLSTKIFNYSNVFEITASIICSFVATALHSHANFN---SVMLSGVTLLLPGLSLTTSVIELGSKNLISGVVRLVFALASAFMLGFGLNIGST 396          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: ORX91251.1 (DUF1212-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 155.6 bits (392), Expect = 5.500e-34
Identity = 91/265 (34.34%), Postives = 155/265 (58.49%), Query Frame = 0
Query:  408 SSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLG 673
            S+F LEE+L       A    ++ K+D+LM L+ A++ +G P  R+E++M +  K L +E SF  LP + FISFG A +  S+THIL+   G ++ KL R   +  Q++ +  L++  A   L+ ++ E  +Y W  ++  Y + S  + PL F+G   D L++G +G   G L +L+   +    +  IT+AI+ SF+   L +        ++    +T LLPG S+T++VIEL ++N++SG  R++ AL++A +LGFGL++G
Sbjct:  141 SAFALEEQL----NITANIADLLLKQDYLMVLSKAMVQFGSPAHRLEYNMSLASKALEIETSFAFLPGVAFISFGDADTHTSDTHILKADRGYNMDKLERSYEISRQVI-YGELEVEDAYELLEDMMDEPQIYPWWIQILNYCLCSFLICPLAFNGDWIDALISGALGLIVGLLSILASKIFNYSNVFEITAAIICSFISAALHSKANFN---SVMLSGVTLLLPGLSLTTSVIELGSKNLISGVVRLVFALVSAFMLGFGLNIG 397          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: KXS09546.1 (DUF1212-domain-containing protein [Gonapodya prolifera JEL478])

HSP 1 Score: 152.5 bits (384), Expect = 4.700e-33
Identity = 83/246 (33.74%), Postives = 142/246 (57.72%), Query Frame = 0
Query:  429 VIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGKS 675
            ++ K+ F+++L  AL SYGCP  R+EH M+     LG+E  F  LP+M+ ++FG   +  SETH LR G G DV++L +VN L   I ++   DLPH +S L  ++    L+   +K+  + + SA  APL+F GS  D  +   +G   G L +  +     G +   + A++   +  ++  +V G C LA+  G   +LLPG  IT  V+E+A++N++ G+ R+  A++ ++++G+GL +G +
Sbjct:   95 LLAKQSFVLRLGKALYSYGCPTYRLEHFMRKCCVELGIEAQFAYLPTMILVTFGDPETHTSETHFLRCGAGYDVWRLAQVNQLATTIPKYS-HDLPHLLSSLSLIVHAPPLWPVWSKLLSHTVCSALAAPLFFGGSWIDMGVCAALGALVGVLCMAGERWSRYGNLMEFSGALVVGLVAKIMERYVRGVCFLAMTMGGTVWLLPGLMITVGVMEVASRNLIIGSVRLFHAMLISVMIGYGLSIGSN 339          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: ORY05530.1 (DUF1212-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 150.2 bits (378), Expect = 2.300e-32
Identity = 88/276 (31.88%), Postives = 160/276 (57.97%), Query Frame = 0
Query:  399 RNQYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGKS 675
            R+ +    LS++ LEE++       A    ++ K+D+L  L+ A++++G P  R+E++M +    L ++ SF  LP + FISFG A +  S+THIL++  G ++ KL R   +  Q++ +  + +  A   L+ ++ E   Y W  ++  +A+ S  + PL F+G+  D L++G +G   G L +LS   +    +  IT++I+ SF+ T L +        ++    +T LLPG S+T++VIEL ++N++SG  R++ AL +A +LGFGL++G +
Sbjct:  127 RSSFADDGLSAYALEEQML----ITANIADLLLKQDYLQVLSKAMVTFGSPAHRLEYNMSLASNALDIDTSFAFLPGVAFISFGDADTHTSDTHILKIDRGYNMDKLERTYEISRQVI-YGEMHVEVAYELLEEMMEEPPTYAWWVQILNFAMCSFLICPLAFNGNWIDALISGALGLVVGSLNLLSTKIFNYSNVFEITASIICSFVATALHSKANFN---SVMLSGVTLLLPGLSLTTSVIELGSKNLISGVVRLVFALASAFMLGFGLNIGST 394          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: OAQ31443.1 (DUF1212-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 149.4 bits (376), Expect = 4.000e-32
Identity = 87/246 (35.37%), Postives = 147/246 (59.76%), Query Frame = 0
Query:  429 VIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGKS 675
            +++++DF+++LA +L+ YG P  R+E ++    KTL +      LP++M ISF    +  SETH+L+V  GLD+YK   V H V ++V H  + +  AI KLD++  E+ +      V  YA+A  C AP++F G+  D  ++  +G   G L  LS+       I  IT +++ +F+   L  H    CA AI F  I  +LPG++ITS+++EL++++++SG+ R+   ++ +LLLG+GL +G S
Sbjct:  326 ILQRQDFILRLAKSLIKYGAPSHRLEDAVDHAAKTLEINLQCIYLPNVMIISFTDYETHTSETHLLKVPAGLDMYKCALV-HQVQKMVTHSSMPVEEAIMKLDTINTEKDVNGRLFTVLAYAVAGFCTAPMFFKGNWIDASISFFMGAAVGLLVWLSEKVPSYAHICDITMSVVVAFVAEALRHH--NVCASAIKFAGIVIILPGYTITSSILELSSRHIISGSVRLFYGVVFSLLLGYGLTIGAS 568          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: KFH62284.1 (hypothetical protein MVEG_11495 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 141.4 bits (355), Expect = 1.100e-29
Identity = 87/277 (31.41%), Postives = 160/277 (57.76%), Query Frame = 0
Query:  398 LRNQYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGKS 675
            L  + + GTLSS   EE++    R       +++++D++++LA A++ +G P  R+E ++    +TL L      LP++M ++F    +  SETH+L+V  GLD+YK  +V H + ++V H  + +  AI KLD++  E+ +      +  YA+AS C AP++F G   D  +  ++G   G +  LS+       I  IT +++ +F+   L  +V   C  ++ F  I  LLPG++IT +++EL++++++SG+ R+  A++ +LLL +GL +G S
Sbjct:  486 LSPESIMGTLSS---EEKM----RITFAVADILQRQDYVLRLARAMIKFGAPSHRLEDAVDHTARTLELNLQCVYLPNVMIVAFTDYETHTSETHLLKVSAGLDMYKFAQV-HQILKMVTHSSMPVEEAIMKLDAINTEKDVIPRWANLLSYAVASFCTAPMFFKGGWVDAGVAFLLGGAVGLMSWLSEKVPSYAHICEITMSVVVAFISEALHVYV---CRSSVKFAGIVMLLPGYTITCSILELSSRHMISGSVRLFYAIIFSLLLSYGLTIGSS 751          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: OAQ25660.1 (DUF1212-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 141.4 bits (355), Expect = 1.100e-29
Identity = 85/275 (30.91%), Postives = 160/275 (58.18%), Query Frame = 0
Query:  400 NQYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGKS 675
            N     TL S   EE++    R       +++++D++++LA A++ +G P  R+E ++    +TL L      +P++M ++F    +  SETH+L+V  GL++YK  +V H + ++V H  + +  AI KLD++  E+ L+     +  YA+ASAC AP++F G   D  ++ ++G   G +  LS+       I  IT +++ +F+   L  +V   C  ++ +  I  LLPG++IT +++EL++++++SG+ R+  A++ +LLLG+GL +G S
Sbjct:  522 NMSASSTLHSLSTEEKM----RITFAVADILQRQDYVLRLARAMIKFGAPSHRLEDAVDHTARTLELNLQCVYMPNVMIVAFTDYETHTSETHLLKVSAGLNMYKFAQV-HQILKMVTHSAMPVEEAIMKLDAINTEKDLWPRWLIILSYALASACTAPMFFKGGWVDAGVSFLIGGTVGMMAWLSEKVPSYAHICEITMSVVVAFVAEALHDNV---CRSSVKWAGIVMLLPGYTITCSILELSSRHMISGSVRLFYAIIFSLLLGYGLTIGAS 788          
BLAST of NO15G00350 vs. NCBI_GenBank
Match: KFH66814.1 (hypothetical protein MVEG_07339 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 140.6 bits (353), Expect = 1.800e-29
Identity = 84/244 (34.43%), Postives = 135/244 (55.33%), Query Frame = 0
Query:  429 VIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLG 673
            ++ ++ FL+ +A AL+ YG P  RIE +  +L + + ++ SF +LP +M ISF    +  S+T  LR   G+D+YKL +V  +   ++      +  A  +L+ +  E+  Y     V  +  ++A VAPL FHGS  D  L G+ G   G L V++    + G +  +TS+I+  F+G   +  V   C  A+    +  LLPG  +T +++ELA++N++SG  RM  ALM A  LGFGL LG
Sbjct:  449 ILSRQSFLITIAKALILYGAPTHRIEETCALLARKMEVDASFALLPGLMTISFSDPETHTSDTRHLRCTQGMDMYKLSKVYTIALDVLHGG--GIERANKELEKVTVEKGYYPVWVTVLAWTTSAAFVAPLAFHGSWLDTALAGLCGLIVGLLGVVAAKLPVYGNVFEVTSSIVVGFIGKAFAERV---CFSAVTLAGVVILLPGLLLTQSIMELASRNIVSGAVRMFYALMYAFFLGFGLSLG 687          
The following BLAST results are available for this feature:
BLAST of NO15G00350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20797.13.600e-11060.05membrane protein [Nannochloropsis gaditana][more]
XP_005853873.12.100e-10555.50pheromone-regulated membrane protein [Nannochlorop... [more]
ORX78797.11.500e-3432.97DUF1212-domain-containing protein, partial [Basidi... [more]
ORX91251.15.500e-3434.34DUF1212-domain-containing protein [Basidiobolus me... [more]
KXS09546.14.700e-3333.74DUF1212-domain-containing protein [Gonapodya proli... [more]
ORY05530.12.300e-3231.88DUF1212-domain-containing protein [Basidiobolus me... [more]
OAQ31443.14.000e-3235.37DUF1212-domain-containing protein [Mortierella elo... [more]
KFH62284.11.100e-2931.41hypothetical protein MVEG_11495 [Mortierella verti... [more]
OAQ25660.11.100e-2930.91DUF1212-domain-containing protein [Mortierella elo... [more]
KFH66814.11.800e-2934.43hypothetical protein MVEG_07339 [Mortierella verti... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR095ngnoR095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001580NSK001580Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|436444gene_4586Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100342g4gene9616Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00350.1NO15G00350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G00350.2NO15G00350.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G00350.3NO15G00350.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G00350.4NO15G00350.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00350.1NO15G00350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G00350.2NO15G00350.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G00350.3NO15G00350.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G00350.4NO15G00350.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00350 ID=NO15G00350|Name=NO15G00350|organism=Nannochloropsis oceanica|type=gene|length=4531bp
AACATGTGTATAAAAGTGACCAGTAATGGCTATTGTGTGCTATACATTTT
GTTGTCTCGTCGCCTTGTCATAGACATTACATTTTTTCGTCCCAGGCCGA
GAGAGGCCAATACATGCGATGGCGCAGCCAGCAAGCGCAACGCGTCCATG
GGCCACACGCACAGCCTCATTTCCTTTGAGATTTATGTCCCTTGTGAAGT
GTGTGATTACCCTTTTTTTGCACGTGTCATTTGCCCTATTCCTTGTTTAT
CCCTCTCCCCACTCATTTTAAAGACAGGGTCATGTCCGACAAACCATCTC
CACAGCCGCCTTCGCAGCAGCAGCAGAAGCAGCAGCAGAAGCAGCAGCAG
CAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACCACAACAACA
TCGACAACATCAACAACAACATCAAGATATCTCAATTCCGTCCCCAATGC
AGCAACAATCACCATCCCATACCCGGTCTGCTCTCCAATTAAATACTCTT
CAGGCTATCTTGGAAACGTCCGCCCTGGTTGAACCCGTCTTTACTGACAG
CCATTCTTTGGAAGAAGAAAACGTGAACCAAGCAAACTCGAGTGATACTC
CCACCCCGCTCGTCCTCGAAACAAGTCACCGAGCCACCCCCGCAACCGCC
CATCTTCGGCCTCCCGTCGCGCTTTCCAACCCGTCCTGGCAGCAGCCCAT
GCAGAACGACGCTCCACTCGAGCAGCACCAACAGCAGCAGCAGGCTTTAT
CAGCATCCACCACATCTAAACGCTTTGATTCGATGAATGCGACAACCTTT
CAGTGCGACCTTTCCAACCTGTCAAACTCAAACACCTCTTCTTTCTATGC
CTCGGATAGAGCTGCTCCTCCAATCTTGAGCAAAACCAGCAATATTTGCA
GCAGCAACACCCGCATCCGCCGCAACAGCAACAGCGATAGTCATGCTCGT
CCTCTTTCGAATACAATGAGTGGCAGCAATCGCGAGAAGAGCTCCGACTT
TTTCTCCTCTTCCGATGGCCTCCATCGTGATACTCATGCAGCAGCAGCAG
CAGCAGCAGGGGATGAGGGCTTTTTCGTCCCCATTGTCACCAGCAACAAC
AACGGCAGTCGGAAAGGAGATTGTGGAAGAGAAGGACAAAGAGAAGGAAA
GAGAAAAGAGACAGCAAGTCTGCGTGGCATACTACAGCGGGGTCTTAGCC
GAGGGACAGAAGACGGGGATATGAGTGATTGGTCCCGGTGTTTGTCGAGT
TGTCAGAGGATGGGGAAAGTGCTCTGTAGTTGCGCACAGGCCTTCTCTAG
AAAGGTGTACATCGATGTCGCTCGGCCCTGGACGAAGAAGTTCAGTGACG
TGGGTGATCGACGGGGGAAGGGGGGGGATTCGGGAGGGATGGAGGAAGAA
GGGAGGGGGCGGGTTGAGGAGGGAAGGACGAAAGAGGAACGGGGATTGCA
GCGTACAATAAGTGTGGAGGAACTGAGAAATCAGTATGTATTCGGGACCT
TGTCATCCTTCGTTTTGGAGGAGGAGCTTGCGGAGGGAGGGAGGGAGTTG
GCGAGGGAGGTCAAGGTGATTCGGAAGGAAGACTTTCTGATGAAATTGGC
AGTGGCCTTGTTGTCGTACGGGTGTCCCATACCCAGGATTGAGCACAGCA
TGCAAGgtaataaacgcaagaaggaggggaggaaaggagagggagggaag
gagaggaagggagggagggaagaaggggatgggtttatagagggaaaatg
tttagaggtatgctgagttccaaaatgcctggattcaatttccctccccc
ctcttgtttacatttgacttgtgagaaatgcaaggaagatgcttacaagg
ccaacccacgcattcatactttcgtgttctttacgccctcccttcccttc
cttcttccctccctctgtgcagTCCTGCTAAAGACTCTGGGGTTGGAAGG
CTCGTTCACTGTCCTCCCGTCCATGATGTTCATTTCCTTTGGCGTAGCTA
TCTCCTCCAATTCAGAGACGCATATTCTTCGGGTGGGGGGAGGGTTGGAT
GTCTACAAGCTGCGGCGCGTGAATCATTTGGgtaagaaggaagggacaga
gagatgggagagagaaaacgccaataaactggaaggtagctgttcattca
taatattattttttttaattatcactgctgcatagccacctgtgtgcgag
caatgcatgtaaagggatggcgtactcattcatgtctcccgccctaatct
cccttcagTGAACCAAATTGTGGAACACCGCATCCTGGACCTACCCCACG
CAATAAGCAAGCTTGACAGTCTTATCGCCGAACAGTCCCTGTACAATTGG
CAAACCAAAGTGGCCTGCTACGCCATTGCCTCAGCCTGTGTCGCCCCTCT
CTACTTCCATGGCTCCCTGACCGACGGACTTCTCACAGGAATAGTAGGGT
TCTTCGCCGGCTGTCTATGGGTGCTCTCGGATGCGTCCTATATCTTGGGG
AAAATAGGCTTAATTACCTCGGCTATTTTATCTTCCTTCCTTGGCACCGT
TCTTTCCGCCCATGTTCCCGGGAGATGTGCGCTAGCTATCCATTTTGGTC
CCATCACCTACCTTCTGCCTGGATGGAGCATTACCTCTGCGGTTATCGgt
aagtctcaatttcgatgttcctttatttcacatttttcgcttgtggaatg
ccttgtaatcattggtatcaatttttccatcttttcttcttctactcttt
catcagAACTTGCCACGCAGAATGTCCTTTCAGGAACAACACGGATGATG
ACAGCGTTGATGAATGCGCTCCTATTGGGCTTCGGCCTCGACCTAGgtaa
gtcatctggtcagataaatctgaccatggcactttcttaaaatttaatcg
atgcattcatttttacatttaaagTCTCAATAAACACAAATCTGTATGTA
GGCCATCGAATGGCTTTTTGGGAGGCGGATGACAGTTGGGTGTCCATGGA
AAATTGCACTGGTGTTTCCAACAGTGTCAAAATACCCCTGTTCCTCACAA
CCGTAACATGTTTTAATATCCTGATGAAAGGGGCGCCTGCCCAATGGCTG
GGCATGCTTTGTGTGGCCACCATCTCTTACGTGACTATCAACATCGCAAG
TACCGTGGGCGGAATGTCTCCGAGTAGTGCTACCGTGGTGACTGCGTTTT
TGGTCGGTATCGCTGGAAACCTGTATGCTTATGCAACCAACAGCCCGGCA
TTGATCCCGATACTTTCGGGTGTCTTTTTGATTGTGCCGGGAGGGATCAG
CGTGAAAGGGGTGCATGCAATGATCAATAACGACATGAGCGGAGGCTTGG
CATTTGGGAGTGGGATGATGGTGGTGGCGGTCTGCATCTCCATTGGTTTG
TTTGCAGCCAGCATCGTCATGTATAAGCCCAAGGTGAAGTTGTCGAATAC
CGTCTTCTTCTAGCATTTTCACCTCTGGTCATCCGGGCATGCATCCTTAT
TAAAGTTGAAATGGGTTAAGGTAACGGCCACCAATTCATCTGCATGGCCT
CTTGAGTGGTTATGTTACAATTAGTGTATGAATAGATGCGCTCAGCTTAG
CGGAGCATAGGTTCACACCAGATAATGTCGTTTCTTTATGTTTAGTGATA
AATTAACTAGAAAATTCTAGAGAAGTTGATGAGAAAGTGTTTACAAAAAA
ACATAAAAAATAAAGTTCGCATTCGTGTGTGTCTAGTGGTAAATGAAATA
GAAAGTAAAATTTAGGGAATATGTCGGGAGGGTGAATATGAGAAAGAATA
TACGAATTACTCGATGTCAAGGCCACATTGCCATCGAGGAAGAAGAGAAG
TTGACGCAGGAGAAGAATTAAGGATAGTTGACGTAAGAATCACGTGTGAT
ACACATTGTGTGCATTTACCGATTATTTCTCAAAAGCTAGCAACAAAAAA
GGCGTAAGGCCCGCAAAAAAAGTCTGTGAACTTGACCATAGAACGAGGGG
AGTGTGGGAGTCTATAATGTCTGTTGTCTTTGAGATATATATACATATAC
ATATGGCGATTATGTCAGCGACCACAGGCTATAGAATCCAGAATGTAAGA
CACCCACAAAGTTGAACATGCACGGGATTTCAAACGTACCTTATTTTTAT
TTTCCTCCGTCCGCTGCTGCTGCATCTGCTGCTATTGCGGCTACTACTGA
GTAGCACAAGGCCTTCAATAAGGTCTTCATTCTTTCGTTTCTTCGACTGT
GAATTACTGGTCTGCTCCTGCTTTTCTGAACGAGACAGTATTTTATAACA
AGTGGTGCTATTTCACAGCTTCCCTCTGGGAACTGCGCATGAAGCAATGC
TGCGGGTCGGAAACGCCGGGATGTTCTGTCTTGTTTTGCTTTGGTCTTGT
GTGTCTCAAGAAAGGGGAGCTTGCGGGGCTTCATTTACTGATGCGCCCTG
TAGTATATATTATATTGTTTTGTGCGTGTGTGCACTCTTCGGCACCAAAG
AATGAAATGGGTGAGTCCCATTCCATCAGCT
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protein sequence of NO15G00350.1

>NO15G00350.1-protein ID=NO15G00350.1-protein|Name=NO15G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=842bp
MSDKPSPQPPSQQQQKQQQKQQQQQQQQQQQQQQQQPQQHRQHQQQHQDI
SIPSPMQQQSPSHTRSALQLNTLQAILETSALVEPVFTDSHSLEEENVNQ
ANSSDTPTPLVLETSHRATPATAHLRPPVALSNPSWQQPMQNDAPLEQHQ
QQQQALSASTTSKRFDSMNATTFQCDLSNLSNSNTSSFYASDRAAPPILS
KTSNICSSNTRIRRNSNSDSHARPLSNTMSGSNREKSSDFFSSSDGLHRD
THAAAAAAAGDEGFFVPIVTSNNNGSRKGDCGREGQREGKRKETASLRGI
LQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPW
TKKFSDVGDRRGKGGDSGGMEEEGRGRVEEGRTKEERGLQRTISVEELRN
QYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPI
PRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGL
DVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYA
IASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSA
ILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLS
GTTRMMTALMNALLLGFGLDLGHRMAFWEADDSWVSMENCTGVSNSVKIP
LFLTTVTCFNILMKGAPAQWLGMLCVATISYVTINIASTVGGMSPSSATV
VTAFLVGIAGNLYAYATNSPALIPILSGVFLIVPGGISVKGVHAMINNDM
SGGLAFGSGMMVVAVCISIGLFAASIVMYKPKVKLSNTVFF*
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protein sequence of NO15G00350.2

>NO15G00350.2-protein ID=NO15G00350.2-protein|Name=NO15G00350.2|organism=Nannochloropsis oceanica|type=polypeptide|length=851bp
MSDKPSPQPPSQQQQKQQQKQQQQQQQQQQQQQQQQPQQHRQHQQQHQDI
SIPSPMQQQSPSHTRSALQLNTLQAILETSALVEPVFTDSHSLEEENVNQ
ANSSDTPTPLVLETSHRATPATAHLRPPVALSNPSWQQPMQNDAPLEQHQ
QQQQALSASTTSKRFDSMNATTFQCDLSNLSNSNTSSFYASDRAAPPILS
KTSNICSSNTRIRRNSNSDSHARPLSNTMSGSNREKSSDFFSSSDGLHRD
THAAAAAAAGDEGFFVPIVTSNNNGSRKGDCGREGQREGKRKETASLRGI
LQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPW
TKKFSDVGDRRGKGGDSGGMEEEGRGRVEEGRTKEERGLQRTISVEELRN
QYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPI
PRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGL
DVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYA
IASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSA
ILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLS
GTTRMMTALMNALLLGFGLDLVSINTNLYVGHRMAFWEADDSWVSMENCT
GVSNSVKIPLFLTTVTCFNILMKGAPAQWLGMLCVATISYVTINIASTVG
GMSPSSATVVTAFLVGIAGNLYAYATNSPALIPILSGVFLIVPGGISVKG
VHAMINNDMSGGLAFGSGMMVVAVCISIGLFAASIVMYKPKVKLSNTVFF
*
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protein sequence of NO15G00350.3

>NO15G00350.3-protein ID=NO15G00350.3-protein|Name=NO15G00350.3|organism=Nannochloropsis oceanica|type=polypeptide|length=686bp
MSDKPSPQPPSQQQQKQQQKQQQQQQQQQQQQQQQQPQQHRQHQQQHQDI
SIPSPMQQQSPSHTRSALQLNTLQAILETSALVEPVFTDSHSLEEENVNQ
ANSSDTPTPLVLETSHRATPATAHLRPPVALSNPSWQQPMQNDAPLEQHQ
QQQQALSASTTSKRFDSMNATTFQCDLSNLSNSNTSSFYASDRAAPPILS
KTSNICSSNTRIRRNSNSDSHARPLSNTMSGSNREKSSDFFSSSDGLHRD
THAAAAAAAGDEGFFVPIVTSNNNGSRKGDCGREGQREGKRKETASLRGI
LQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPW
TKKFSDVGDRRGKGGDSGGMEEEGRGRVEEGRTKEERGLQRTISVEELRN
QYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPI
PRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGL
DVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYA
IASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSA
ILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLS
GTTRMMTALMNALLLGFGLDLGKSSGQINLTMALS*
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protein sequence of NO15G00350.4

>NO15G00350.4-protein ID=NO15G00350.4-protein|Name=NO15G00350.4|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MSDKPSPQPPSQQQQKQQQKQQQQQQQQQQQQQQQQPQQHRQHQQQHQDI
SIPSPMQQQSPSHTRSALQLNTLQAILETSALVEPVFTDSHSLEEENVNQ
ANSSDTPTPLVLETSHRATPATAHLRPPVALSNPSWQQPMQNDAPLEQHQ
QQQQALSASTTSKRFDSMNATTFQCDLSNLSNSNTSSFYASDRAAPPILS
KTSNICSSNTRIRRNSNSDSHARPLSNTMSGSNREKSSDFFSSSDGLHRD
THAAAAAAAGDEGFFVPIVTSNNNGSRKGDCGREGQREGKRKETASLRGI
LQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPW
TKKFSDVGDRRGKGGDSGGMEEEGRGRVEEGRTKEERGLQRTISVEELRN
QYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPI
PRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGL
DVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYA
IASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSA
ILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIGKSQFRCSF
ISHFSLVECLVIIGINFSIFSSSTLSSELATQNVLSGTTRMMTALMNALL
LGFGLDLGKSSGQINLTMALS*
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