NO15G00350.1, NO15G00350.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G00350.1
Unique Name	NO15G00350.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3875
Alignment location	chr15:114679..119209 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:114679..119209 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G00350.1 vs.
Match: EWM20797.1 (membrane protein [Nannochloropsis gaditana])

HSP 1 Score: 651.4 bits (1679), Expect = 3.900e-183
Identity = 349/575 (60.70%), Postives = 436/575 (75.83%), Query Frame = 0

Query:  269 VTSNNNGSRKGDCGREGQREGKRKETASLRGILQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPWTKKFSDVGDRRGKGGDSGGMEEEGRGRVEEGRTKEERGLQRTISVEELRNQYVFGTLSSFVLE--EELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGHRMAFWEADDSWVSMENCTGVSNSVKIPLFLTTVTCFNILMKGAPAQWLGMLCVATISYVTINIASTVGGMSPSSATVVTAFLVGIAGNLYAYATNSPALIPILSGVFLIVPGGISVKGVHAMINNDMSGGLAFGSGMMVVAVCISIGLFAASIVMYKPKVKLSNTVFF 842
            ++S+ +GS +   G EG  E + +   SL  ++ +  S+GTEDGD SD++R  S+     K +C+C    ++KV+       T+     G+R          E+E     EEG T ++      + VE++R QYV GTLSS  LE  E +   G ++  E  VIRKEDFLMKLAV+LLSYGCPIPRIE+SMQVLL+T+G+EGSF +LP++MFISFG   +SN+ETHIL VGGGLDVYKLRRVNHLVN I+E RI  LP AI KLDS+IAE  LY+WQ K+ACY IAS CVAPL+F GSL DGLL G VG FAG LWV++D SYI+GK+G+  SA L+SFL T+L+AH+P  C+LAIHFGPI YLLPGWSITS++IEL+TQ+++SGT RMMTALMNALL+GFGLDLGHRM FWE++ SW S ENC  VS   +IPLF+ TVTCFNILMK AP QWL ML VA I YVTIN+A TVG M+P S+TV+TAF+ G+AGNLYAYATNSPAL+PIL+GVFLIVPGG+SV+GV   +N+D++GGL FGSGMM+VAV ISIGLFA+S++MY+PK+K+SN VFF
Sbjct:  215 LSSDTHGSPRA--GEEGGAEEQPEAVGSLTRMVTQKFSKGTEDGDKSDFARFWSALAGFSKKMCACCGWGAKKVF-------TEGIKQFGER-----PYWEEEKEWAESPEEGETPDD-----DMDVEDVRAQYVLGTLSSTHLEGLEGVDRPGGKVGNEAAVIRKEDFLMKLAVSLLSYGCPIPRIEYSMQVLLQTMGMEGSFIILPNIMFISFGSPSASNTETHILPVGGGLDVYKLRRVNHLVNLILEQRIPSLPFAIKKLDSMIAEPPLYSWQVKLACYTIASGCVAPLFFSGSLIDGLLAGFVGIFAGGLWVMADVSYIVGKLGVFASAWLASFLATILAAHIPNTCSLAIHFGPIVYLLPGWSITSSIIELSTQSMISGTVRMMTALMNALLIGFGLDLGHRMTFWESNVSWTSTENCNPVSMWTQIPLFIATVTCFNILMKAAPVQWLSMLIVAAIGYVTINLAPTVGEMTPGSSTVLTAFVCGVAGNLYAYATNSPALVPILAGVFLIVPGGMSVRGVEKWLNDDLNGGLDFGSGMMLVAVSISIGLFASSVIMYRPKLKISNAVFF 770

The following BLAST results are available for this feature:

BLAST of NO15G00350.1 vs.

BLAST of NO15G00350.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20797.1	3.900e-183	60.70	membrane protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G00350	NO15G00350	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00350.1	NO15G00350.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00350.1.cds1	NO15G00350.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00350.1.cds2	NO15G00350.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00350.1.cds3	NO15G00350.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00350.1.cds4	NO15G00350.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00350.1.cds5	NO15G00350.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:114679..119209+
coding sequence from alignment at chr15:114679..119209+

mRNA sequence

>NO15G00350.1 ID=NO15G00350.1|Name=NO15G00350.1|organism=Nannochloropsis oceanica|type=mRNA|length=3875bp
AACATGTGTATAAAAGTGACCAGTAATGGCTATTGTGTGCTATACATTTT
GTTGTCTCGTCGCCTTGTCATAGACATTACATTTTTTCGTCCCAGGCCGA
GAGAGGCCAATACATGCGATGGCGCAGCCAGCAAGCGCAACGCGTCCATG
GGCCACACGCACAGCCTCATTTCCTTTGAGATTTATGTCCCTTGTGAAGT
GTGTGATTACCCTTTTTTTGCACGTGTCATTTGCCCTATTCCTTGTTTAT
CCCTCTCCCCACTCATTTTAAAGACAGGGTCATGTCCGACAAACCATCTC
CACAGCCGCCTTCGCAGCAGCAGCAGAAGCAGCAGCAGAAGCAGCAGCAG
CAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACCACAACAACA
TCGACAACATCAACAACAACATCAAGATATCTCAATTCCGTCCCCAATGC
AGCAACAATCACCATCCCATACCCGGTCTGCTCTCCAATTAAATACTCTT
CAGGCTATCTTGGAAACGTCCGCCCTGGTTGAACCCGTCTTTACTGACAG
CCATTCTTTGGAAGAAGAAAACGTGAACCAAGCAAACTCGAGTGATACTC
CCACCCCGCTCGTCCTCGAAACAAGTCACCGAGCCACCCCCGCAACCGCC
CATCTTCGGCCTCCCGTCGCGCTTTCCAACCCGTCCTGGCAGCAGCCCAT
GCAGAACGACGCTCCACTCGAGCAGCACCAACAGCAGCAGCAGGCTTTAT
CAGCATCCACCACATCTAAACGCTTTGATTCGATGAATGCGACAACCTTT
CAGTGCGACCTTTCCAACCTGTCAAACTCAAACACCTCTTCTTTCTATGC
CTCGGATAGAGCTGCTCCTCCAATCTTGAGCAAAACCAGCAATATTTGCA
GCAGCAACACCCGCATCCGCCGCAACAGCAACAGCGATAGTCATGCTCGT
CCTCTTTCGAATACAATGAGTGGCAGCAATCGCGAGAAGAGCTCCGACTT
TTTCTCCTCTTCCGATGGCCTCCATCGTGATACTCATGCAGCAGCAGCAG
CAGCAGCAGGGGATGAGGGCTTTTTCGTCCCCATTGTCACCAGCAACAAC
AACGGCAGTCGGAAAGGAGATTGTGGAAGAGAAGGACAAAGAGAAGGAAA
GAGAAAAGAGACAGCAAGTCTGCGTGGCATACTACAGCGGGGTCTTAGCC
GAGGGACAGAAGACGGGGATATGAGTGATTGGTCCCGGTGTTTGTCGAGT
TGTCAGAGGATGGGGAAAGTGCTCTGTAGTTGCGCACAGGCCTTCTCTAG
AAAGGTGTACATCGATGTCGCTCGGCCCTGGACGAAGAAGTTCAGTGACG
TGGGTGATCGACGGGGGAAGGGGGGGGATTCGGGAGGGATGGAGGAAGAA
GGGAGGGGGCGGGTTGAGGAGGGAAGGACGAAAGAGGAACGGGGATTGCA
GCGTACAATAAGTGTGGAGGAACTGAGAAATCAGTATGTATTCGGGACCT
TGTCATCCTTCGTTTTGGAGGAGGAGCTTGCGGAGGGAGGGAGGGAGTTG
GCGAGGGAGGTCAAGGTGATTCGGAAGGAAGACTTTCTGATGAAATTGGC
AGTGGCCTTGTTGTCGTACGGGTGTCCCATACCCAGGATTGAGCACAGCA
TGCAAGTCCTGCTAAAGACTCTGGGGTTGGAAGGCTCGTTCACTGTCCTC
CCGTCCATGATGTTCATTTCCTTTGGCGTAGCTATCTCCTCCAATTCAGA
GACGCATATTCTTCGGGTGGGGGGAGGGTTGGATGTCTACAAGCTGCGGC
GCGTGAATCATTTGGTGAACCAAATTGTGGAACACCGCATCCTGGACCTA
CCCCACGCAATAAGCAAGCTTGACAGTCTTATCGCCGAACAGTCCCTGTA
CAATTGGCAAACCAAAGTGGCCTGCTACGCCATTGCCTCAGCCTGTGTCG
CCCCTCTCTACTTCCATGGCTCCCTGACCGACGGACTTCTCACAGGAATA
GTAGGGTTCTTCGCCGGCTGTCTATGGGTGCTCTCGGATGCGTCCTATAT
CTTGGGGAAAATAGGCTTAATTACCTCGGCTATTTTATCTTCCTTCCTTG
GCACCGTTCTTTCCGCCCATGTTCCCGGGAGATGTGCGCTAGCTATCCAT
TTTGGTCCCATCACCTACCTTCTGCCTGGATGGAGCATTACCTCTGCGGT
TATCGAACTTGCCACGCAGAATGTCCTTTCAGGAACAACACGGATGATGA
CAGCGTTGATGAATGCGCTCCTATTGGGCTTCGGCCTCGACCTAGGCCAT
CGAATGGCTTTTTGGGAGGCGGATGACAGTTGGGTGTCCATGGAAAATTG
CACTGGTGTTTCCAACAGTGTCAAAATACCCCTGTTCCTCACAACCGTAA
CATGTTTTAATATCCTGATGAAAGGGGCGCCTGCCCAATGGCTGGGCATG
CTTTGTGTGGCCACCATCTCTTACGTGACTATCAACATCGCAAGTACCGT
GGGCGGAATGTCTCCGAGTAGTGCTACCGTGGTGACTGCGTTTTTGGTCG
GTATCGCTGGAAACCTGTATGCTTATGCAACCAACAGCCCGGCATTGATC
CCGATACTTTCGGGTGTCTTTTTGATTGTGCCGGGAGGGATCAGCGTGAA
AGGGGTGCATGCAATGATCAATAACGACATGAGCGGAGGCTTGGCATTTG
GGAGTGGGATGATGGTGGTGGCGGTCTGCATCTCCATTGGTTTGTTTGCA
GCCAGCATCGTCATGTATAAGCCCAAGGTGAAGTTGTCGAATACCGTCTT
CTTCTAGCATTTTCACCTCTGGTCATCCGGGCATGCATCCTTATTAAAGT
TGAAATGGGTTAAGGTAACGGCCACCAATTCATCTGCATGGCCTCTTGAG
TGGTTATGTTACAATTAGTGTATGAATAGATGCGCTCAGCTTAGCGGAGC
ATAGGTTCACACCAGATAATGTCGTTTCTTTATGTTTAGTGATAAATTAA
CTAGAAAATTCTAGAGAAGTTGATGAGAAAGTGTTTACAAAAAAACATAA
AAAATAAAGTTCGCATTCGTGTGTGTCTAGTGGTAAATGAAATAGAAAGT
AAAATTTAGGGAATATGTCGGGAGGGTGAATATGAGAAAGAATATACGAA
TTACTCGATGTCAAGGCCACATTGCCATCGAGGAAGAAGAGAAGTTGACG
CAGGAGAAGAATTAAGGATAGTTGACGTAAGAATCACGTGTGATACACAT
TGTGTGCATTTACCGATTATTTCTCAAAAGCTAGCAACAAAAAAGGCGTA
AGGCCCGCAAAAAAAGTCTGTGAACTTGACCATAGAACGAGGGGAGTGTG
GGAGTCTATAATGTCTGTTGTCTTTGAGATATATATACATATACATATGG
CGATTATGTCAGCGACCACAGGCTATAGAATCCAGAATGTAAGACACCCA
CAAAGTTGAACATGCACGGGATTTCAAACGTACCTTATTTTTATTTTCCT
CCGTCCGCTGCTGCTGCATCTGCTGCTATTGCGGCTACTACTGAGTAGCA
CAAGGCCTTCAATAAGGTCTTCATTCTTTCGTTTCTTCGACTGTGAATTA
CTGGTCTGCTCCTGCTTTTCTGAACGAGACAGTATTTTATAACAAGTGGT
GCTATTTCACAGCTTCCCTCTGGGAACTGCGCATGAAGCAATGCTGCGGG
TCGGAAACGCCGGGATGTTCTGTCTTGTTTTGCTTTGGTCTTGTGTGTCT
CAAGAAAGGGGAGCTTGCGGGGCTTCATTTACTGATGCGCCCTGTAGTAT
ATATTATATTGTTTTGTGCGTGTGTGCACTCTTCGGCACCAAAGAATGAA
ATGGGTGAGTCCCATTCCATCAGCT

protein sequence of NO15G00350.1

>NO15G00350.1-protein ID=NO15G00350.1-protein|Name=NO15G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=842bp
MSDKPSPQPPSQQQQKQQQKQQQQQQQQQQQQQQQQPQQHRQHQQQHQDI
SIPSPMQQQSPSHTRSALQLNTLQAILETSALVEPVFTDSHSLEEENVNQ
ANSSDTPTPLVLETSHRATPATAHLRPPVALSNPSWQQPMQNDAPLEQHQ
QQQQALSASTTSKRFDSMNATTFQCDLSNLSNSNTSSFYASDRAAPPILS
KTSNICSSNTRIRRNSNSDSHARPLSNTMSGSNREKSSDFFSSSDGLHRD
THAAAAAAAGDEGFFVPIVTSNNNGSRKGDCGREGQREGKRKETASLRGI
LQRGLSRGTEDGDMSDWSRCLSSCQRMGKVLCSCAQAFSRKVYIDVARPW
TKKFSDVGDRRGKGGDSGGMEEEGRGRVEEGRTKEERGLQRTISVEELRN
QYVFGTLSSFVLEEELAEGGRELAREVKVIRKEDFLMKLAVALLSYGCPI
PRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAISSNSETHILRVGGGL
DVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAEQSLYNWQTKVACYA
IASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSDASYILGKIGLITSA
ILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSITSAVIELATQNVLS
GTTRMMTALMNALLLGFGLDLGHRMAFWEADDSWVSMENCTGVSNSVKIP
LFLTTVTCFNILMKGAPAQWLGMLCVATISYVTINIASTVGGMSPSSATV
VTAFLVGIAGNLYAYATNSPALIPILSGVFLIVPGGISVKGVHAMINNDM
SGGLAFGSGMMVVAVCISIGLFAASIVMYKPKVKLSNTVFF*

mRNA from alignment at chr15:114679..119209+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G00350.1 ID=NO15G00350.1|Name=NO15G00350.1|organism=Nannochloropsis oceanica|type=mRNA|length=4531bp|location=Sequence derived from alignment at chr15:114679..119209+ (Nannochloropsis oceanica)
AACATGTGTATAAAAGTGACCAGTAATGGCTATTGTGTGCTATACATTTT
GTTGTCTCGTCGCCTTGTCATAGACATTACATTTTTTCGTCCCAGGCCGA
GAGAGGCCAATACATGCGATGGCGCAGCCAGCAAGCGCAACGCGTCCATG
GGCCACACGCACAGCCTCATTTCCTTTGAGATTTATGTCCCTTGTGAAGT
GTGTGATTACCCTTTTTTTGCACGTGTCATTTGCCCTATTCCTTGTTTAT
CCCTCTCCCCACTCATTTTAAAGACAGGGTCATGTCCGACAAACCATCTC
CACAGCCGCCTTCGCAGCAGCAGCAGAAGCAGCAGCAGAAGCAGCAGCAG
CAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACCACAACAACA
TCGACAACATCAACAACAACATCAAGATATCTCAATTCCGTCCCCAATGC
AGCAACAATCACCATCCCATACCCGGTCTGCTCTCCAATTAAATACTCTT
CAGGCTATCTTGGAAACGTCCGCCCTGGTTGAACCCGTCTTTACTGACAG
CCATTCTTTGGAAGAAGAAAACGTGAACCAAGCAAACTCGAGTGATACTC
CCACCCCGCTCGTCCTCGAAACAAGTCACCGAGCCACCCCCGCAACCGCC
CATCTTCGGCCTCCCGTCGCGCTTTCCAACCCGTCCTGGCAGCAGCCCAT
GCAGAACGACGCTCCACTCGAGCAGCACCAACAGCAGCAGCAGGCTTTAT
CAGCATCCACCACATCTAAACGCTTTGATTCGATGAATGCGACAACCTTT
CAGTGCGACCTTTCCAACCTGTCAAACTCAAACACCTCTTCTTTCTATGC
CTCGGATAGAGCTGCTCCTCCAATCTTGAGCAAAACCAGCAATATTTGCA
GCAGCAACACCCGCATCCGCCGCAACAGCAACAGCGATAGTCATGCTCGT
CCTCTTTCGAATACAATGAGTGGCAGCAATCGCGAGAAGAGCTCCGACTT
TTTCTCCTCTTCCGATGGCCTCCATCGTGATACTCATGCAGCAGCAGCAG
CAGCAGCAGGGGATGAGGGCTTTTTCGTCCCCATTGTCACCAGCAACAAC
AACGGCAGTCGGAAAGGAGATTGTGGAAGAGAAGGACAAAGAGAAGGAAA
GAGAAAAGAGACAGCAAGTCTGCGTGGCATACTACAGCGGGGTCTTAGCC
GAGGGACAGAAGACGGGGATATGAGTGATTGGTCCCGGTGTTTGTCGAGT
TGTCAGAGGATGGGGAAAGTGCTCTGTAGTTGCGCACAGGCCTTCTCTAG
AAAGGTGTACATCGATGTCGCTCGGCCCTGGACGAAGAAGTTCAGTGACG
TGGGTGATCGACGGGGGAAGGGGGGGGATTCGGGAGGGATGGAGGAAGAA
GGGAGGGGGCGGGTTGAGGAGGGAAGGACGAAAGAGGAACGGGGATTGCA
GCGTACAATAAGTGTGGAGGAACTGAGAAATCAGTATGTATTCGGGACCT
TGTCATCCTTCGTTTTGGAGGAGGAGCTTGCGGAGGGAGGGAGGGAGTTG
GCGAGGGAGGTCAAGGTGATTCGGAAGGAAGACTTTCTGATGAAATTGGC
AGTGGCCTTGTTGTCGTACGGGTGTCCCATACCCAGGATTGAGCACAGCA
TGCAAGGTAATAAACGCAAGAAGGAGGGGAGGAAAGGAGAGGGAGGGAAG
GAGAGGAAGGGAGGGAGGGAAGAAGGGGATGGGTTTATAGAGGGAAAATG
TTTAGAGGTATGCTGAGTTCCAAAATGCCTGGATTCAATTTCCCTCCCCC
CTCTTGTTTACATTTGACTTGTGAGAAATGCAAGGAAGATGCTTACAAGG
CCAACCCACGCATTCATACTTTCGTGTTCTTTACGCCCTCCCTTCCCTTC
CTTCTTCCCTCCCTCTGTGCAGTCCTGCTAAAGACTCTGGGGTTGGAAGG
CTCGTTCACTGTCCTCCCGTCCATGATGTTCATTTCCTTTGGCGTAGCTA
TCTCCTCCAATTCAGAGACGCATATTCTTCGGGTGGGGGGAGGGTTGGAT
GTCTACAAGCTGCGGCGCGTGAATCATTTGGGTAAGAAGGAAGGGACAGA
GAGATGGGAGAGAGAAAACGCCAATAAACTGGAAGGTAGCTGTTCATTCA
TAATATTATTTTTTTTAATTATCACTGCTGCATAGCCACCTGTGTGCGAG
CAATGCATGTAAAGGGATGGCGTACTCATTCATGTCTCCCGCCCTAATCT
CCCTTCAGTGAACCAAATTGTGGAACACCGCATCCTGGACCTACCCCACG
CAATAAGCAAGCTTGACAGTCTTATCGCCGAACAGTCCCTGTACAATTGG
CAAACCAAAGTGGCCTGCTACGCCATTGCCTCAGCCTGTGTCGCCCCTCT
CTACTTCCATGGCTCCCTGACCGACGGACTTCTCACAGGAATAGTAGGGT
TCTTCGCCGGCTGTCTATGGGTGCTCTCGGATGCGTCCTATATCTTGGGG
AAAATAGGCTTAATTACCTCGGCTATTTTATCTTCCTTCCTTGGCACCGT
TCTTTCCGCCCATGTTCCCGGGAGATGTGCGCTAGCTATCCATTTTGGTC
CCATCACCTACCTTCTGCCTGGATGGAGCATTACCTCTGCGGTTATCGGT
AAGTCTCAATTTCGATGTTCCTTTATTTCACATTTTTCGCTTGTGGAATG
CCTTGTAATCATTGGTATCAATTTTTCCATCTTTTCTTCTTCTACTCTTT
CATCAGAACTTGCCACGCAGAATGTCCTTTCAGGAACAACACGGATGATG
ACAGCGTTGATGAATGCGCTCCTATTGGGCTTCGGCCTCGACCTAGGTAA
GTCATCTGGTCAGATAAATCTGACCATGGCACTTTCTTAAAATTTAATCG
ATGCATTCATTTTTACATTTAAAGTCTCAATAAACACAAATCTGTATGTA
GGCCATCGAATGGCTTTTTGGGAGGCGGATGACAGTTGGGTGTCCATGGA
AAATTGCACTGGTGTTTCCAACAGTGTCAAAATACCCCTGTTCCTCACAA
CCGTAACATGTTTTAATATCCTGATGAAAGGGGCGCCTGCCCAATGGCTG
GGCATGCTTTGTGTGGCCACCATCTCTTACGTGACTATCAACATCGCAAG
TACCGTGGGCGGAATGTCTCCGAGTAGTGCTACCGTGGTGACTGCGTTTT
TGGTCGGTATCGCTGGAAACCTGTATGCTTATGCAACCAACAGCCCGGCA
TTGATCCCGATACTTTCGGGTGTCTTTTTGATTGTGCCGGGAGGGATCAG
CGTGAAAGGGGTGCATGCAATGATCAATAACGACATGAGCGGAGGCTTGG
CATTTGGGAGTGGGATGATGGTGGTGGCGGTCTGCATCTCCATTGGTTTG
TTTGCAGCCAGCATCGTCATGTATAAGCCCAAGGTGAAGTTGTCGAATAC
CGTCTTCTTCTAGCATTTTCACCTCTGGTCATCCGGGCATGCATCCTTAT
TAAAGTTGAAATGGGTTAAGGTAACGGCCACCAATTCATCTGCATGGCCT
CTTGAGTGGTTATGTTACAATTAGTGTATGAATAGATGCGCTCAGCTTAG
CGGAGCATAGGTTCACACCAGATAATGTCGTTTCTTTATGTTTAGTGATA
AATTAACTAGAAAATTCTAGAGAAGTTGATGAGAAAGTGTTTACAAAAAA
ACATAAAAAATAAAGTTCGCATTCGTGTGTGTCTAGTGGTAAATGAAATA
GAAAGTAAAATTTAGGGAATATGTCGGGAGGGTGAATATGAGAAAGAATA
TACGAATTACTCGATGTCAAGGCCACATTGCCATCGAGGAAGAAGAGAAG
TTGACGCAGGAGAAGAATTAAGGATAGTTGACGTAAGAATCACGTGTGAT
ACACATTGTGTGCATTTACCGATTATTTCTCAAAAGCTAGCAACAAAAAA
GGCGTAAGGCCCGCAAAAAAAGTCTGTGAACTTGACCATAGAACGAGGGG
AGTGTGGGAGTCTATAATGTCTGTTGTCTTTGAGATATATATACATATAC
ATATGGCGATTATGTCAGCGACCACAGGCTATAGAATCCAGAATGTAAGA
CACCCACAAAGTTGAACATGCACGGGATTTCAAACGTACCTTATTTTTAT
TTTCCTCCGTCCGCTGCTGCTGCATCTGCTGCTATTGCGGCTACTACTGA
GTAGCACAAGGCCTTCAATAAGGTCTTCATTCTTTCGTTTCTTCGACTGT
GAATTACTGGTCTGCTCCTGCTTTTCTGAACGAGACAGTATTTTATAACA
AGTGGTGCTATTTCACAGCTTCCCTCTGGGAACTGCGCATGAAGCAATGC
TGCGGGTCGGAAACGCCGGGATGTTCTGTCTTGTTTTGCTTTGGTCTTGT
GTGTCTCAAGAAAGGGGAGCTTGCGGGGCTTCATTTACTGATGCGCCCTG
TAGTATATATTATATTGTTTTGTGCGTGTGTGCACTCTTCGGCACCAAAG
AATGAAATGGGTGAGTCCCATTCCATCAGCT

Coding sequence (CDS) from alignment at chr15:114679..119209+

>NO15G00350.1 ID=NO15G00350.1|Name=NO15G00350.1|organism=Nannochloropsis oceanica|type=CDS|length=2526bp|location=Sequence derived from alignment at chr15:114679..119209+ (Nannochloropsis oceanica)
ATGTCCGACAAACCATCTCCACAGCCGCCTTCGCAGCAGCAGCAGAAGCA
GCAGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAAC
AACAACAACCACAACAACATCGACAACATCAACAACAACATCAAGATATC
TCAATTCCGTCCCCAATGCAGCAACAATCACCATCCCATACCCGGTCTGC
TCTCCAATTAAATACTCTTCAGGCTATCTTGGAAACGTCCGCCCTGGTTG
AACCCGTCTTTACTGACAGCCATTCTTTGGAAGAAGAAAACGTGAACCAA
GCAAACTCGAGTGATACTCCCACCCCGCTCGTCCTCGAAACAAGTCACCG
AGCCACCCCCGCAACCGCCCATCTTCGGCCTCCCGTCGCGCTTTCCAACC
CGTCCTGGCAGCAGCCCATGCAGAACGACGCTCCACTCGAGCAGCACCAA
CAGCAGCAGCAGGCTTTATCAGCATCCACCACATCTAAACGCTTTGATTC
GATGAATGCGACAACCTTTCAGTGCGACCTTTCCAACCTGTCAAACTCAA
ACACCTCTTCTTTCTATGCCTCGGATAGAGCTGCTCCTCCAATCTTGAGC
AAAACCAGCAATATTTGCAGCAGCAACACCCGCATCCGCCGCAACAGCAA
CAGCGATAGTCATGCTCGTCCTCTTTCGAATACAATGAGTGGCAGCAATC
GCGAGAAGAGCTCCGACTTTTTCTCCTCTTCCGATGGCCTCCATCGTGAT
ACTCATGCAGCAGCAGCAGCAGCAGCAGGGGATGAGGGCTTTTTCGTCCC
CATTGTCACCAGCAACAACAACGGCAGTCGGAAAGGAGATTGTGGAAGAG
AAGGACAAAGAGAAGGAAAGAGAAAAGAGACAGCAAGTCTGCGTGGCATA
CTACAGCGGGGTCTTAGCCGAGGGACAGAAGACGGGGATATGAGTGATTG
GTCCCGGTGTTTGTCGAGTTGTCAGAGGATGGGGAAAGTGCTCTGTAGTT
GCGCACAGGCCTTCTCTAGAAAGGTGTACATCGATGTCGCTCGGCCCTGG
ACGAAGAAGTTCAGTGACGTGGGTGATCGACGGGGGAAGGGGGGGGATTC
GGGAGGGATGGAGGAAGAAGGGAGGGGGCGGGTTGAGGAGGGAAGGACGA
AAGAGGAACGGGGATTGCAGCGTACAATAAGTGTGGAGGAACTGAGAAAT
CAGTATGTATTCGGGACCTTGTCATCCTTCGTTTTGGAGGAGGAGCTTGC
GGAGGGAGGGAGGGAGTTGGCGAGGGAGGTCAAGGTGATTCGGAAGGAAG
ACTTTCTGATGAAATTGGCAGTGGCCTTGTTGTCGTACGGGTGTCCCATA
CCCAGGATTGAGCACAGCATGCAAGTCCTGCTAAAGACTCTGGGGTTGGA
AGGCTCGTTCACTGTCCTCCCGTCCATGATGTTCATTTCCTTTGGCGTAG
CTATCTCCTCCAATTCAGAGACGCATATTCTTCGGGTGGGGGGAGGGTTG
GATGTCTACAAGCTGCGGCGCGTGAATCATTTGGTGAACCAAATTGTGGA
ACACCGCATCCTGGACCTACCCCACGCAATAAGCAAGCTTGACAGTCTTA
TCGCCGAACAGTCCCTGTACAATTGGCAAACCAAAGTGGCCTGCTACGCC
ATTGCCTCAGCCTGTGTCGCCCCTCTCTACTTCCATGGCTCCCTGACCGA
CGGACTTCTCACAGGAATAGTAGGGTTCTTCGCCGGCTGTCTATGGGTGC
TCTCGGATGCGTCCTATATCTTGGGGAAAATAGGCTTAATTACCTCGGCT
ATTTTATCTTCCTTCCTTGGCACCGTTCTTTCCGCCCATGTTCCCGGGAG
ATGTGCGCTAGCTATCCATTTTGGTCCCATCACCTACCTTCTGCCTGGAT
GGAGCATTACCTCTGCGGTTATCGAACTTGCCACGCAGAATGTCCTTTCA
GGAACAACACGGATGATGACAGCGTTGATGAATGCGCTCCTATTGGGCTT
CGGCCTCGACCTAGGCCATCGAATGGCTTTTTGGGAGGCGGATGACAGTT
GGGTGTCCATGGAAAATTGCACTGGTGTTTCCAACAGTGTCAAAATACCC
CTGTTCCTCACAACCGTAACATGTTTTAATATCCTGATGAAAGGGGCGCC
TGCCCAATGGCTGGGCATGCTTTGTGTGGCCACCATCTCTTACGTGACTA
TCAACATCGCAAGTACCGTGGGCGGAATGTCTCCGAGTAGTGCTACCGTG
GTGACTGCGTTTTTGGTCGGTATCGCTGGAAACCTGTATGCTTATGCAAC
CAACAGCCCGGCATTGATCCCGATACTTTCGGGTGTCTTTTTGATTGTGC
CGGGAGGGATCAGCGTGAAAGGGGTGCATGCAATGATCAATAACGACATG
AGCGGAGGCTTGGCATTTGGGAGTGGGATGATGGTGGTGGCGGTCTGCAT
CTCCATTGGTTTGTTTGCAGCCAGCATCGTCATGTATAAGCCCAAGGTGA
AGTTGTCGAATACCGTCTTCTTCTAG

Synonyms

Publications