NO15G00210, NO15G00210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00210 vs. NCBI_GenBank
Match: EWM20813.1 (small nuclear ribonucleoprotein [Nannochloropsis gaditana]) HSP 1 Score: 174.9 bits (442), Expect = 2.000e-40 Identity = 83/94 (88.30%), Postives = 92/94 (97.87%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDMLKRAPMFKRIKV 95 MSVTGKGGVGIPIILLHDAEGGI+TVETRTGELYRGLLDEAEDNMNLI+RD TKTNVHGKES+V+L+YIKG+ VN++ILPDMLK+APMFKRIKV Sbjct: 1 MSVTGKGGVGIPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILRDVTKTNVHGKESKVELIYIKGSQVNFMILPDMLKKAPMFKRIKV 94
BLAST of NO15G00210 vs. NCBI_GenBank
Match: XP_008893681.1 (hypothetical protein PPTG_02041 [Phytophthora parasitica INRA-310] >ETI44658.1 hypothetical protein F443_10649 [Phytophthora parasitica P1569] >ETK84643.1 hypothetical protein L915_10409 [Phytophthora parasitica] >ETL38079.1 hypothetical protein L916_10303 [Phytophthora parasitica] >ETL91182.1 hypothetical protein L917_10241 [Phytophthora parasitica] >ETM44509.1 hypothetical protein L914_10271 [Phytophthora parasitica] >ETN21977.1 hypothetical protein PPTG_02041 [Phytophthora parasitica INRA-310] >ETO73308.1 hypothetical protein F444_10749 [Phytophthora parasitica P1976] >ETP14468.1 hypothetical protein F441_10589 [Phytophthora parasitica CJ01A1] >ETP42549.1 hypothetical protein F442_10549 [Phytophthora parasitica P10297]) HSP 1 Score: 159.5 bits (402), Expect = 8.500e-36 Identity = 73/127 (57.48%), Postives = 99/127 (77.95%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDMLKRAPMFKRIKVWKKYHGNVPELGAG------VRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG IV++E +TGE YRGLLDE EDNMN +M+D+ +T+++G S+V+ VY++G+ + +I+ PDMLK APMFKR+K+WKK+ G +P LG G RGQAA I++K+Q Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRTDINGNTSQVEQVYLRGSQILFIVFPDMLKHAPMFKRVKMWKKHKGAIPTLGQGGVGGGAPRGQAAAIIRKAQ 127
BLAST of NO15G00210 vs. NCBI_GenBank
Match: CCA17104.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 152.1 bits (383), Expect = 1.400e-33 Identity = 67/127 (52.76%), Postives = 99/127 (77.95%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDMLKRAPMFKRIKVWKKYHGNVPEL------GAGVRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG V++E ++GE+YRG L+E EDNMN +++++ +T+++G + V+LVY++G+ + +I+ PDMLK APMFKR+K+WKK+ G +P L GAG RGQAA I++K++ Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTTVSIEMKSGEIYRGYLEETEDNMNCVLKEAMRTDINGNTTHVELVYVRGSQILFIVFPDMLKHAPMFKRVKLWKKHKGVIPSLGQGGPGGAGPRGQAAAIIRKAK 127
BLAST of NO15G00210 vs. NCBI_GenBank
Match: XP_002899088.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY62452.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 151.0 bits (380), Expect = 3.000e-33 Identity = 72/137 (52.55%), Postives = 100/137 (72.99%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDM----------LKRAPMFKRIKVWKKYHGNVPELGAG------VRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG IV++E +TGE YRGLLDE EDNMN +M+D+ +T+++G S+V+ VY++G+ + +I+ PD+ LK APMFKR+K+WKK+ G++P LG G RGQAA I++K+Q Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRTDINGNTSQVEQVYLRGSQILFIVFPDIYPLQPDIAVTLKHAPMFKRVKMWKKHKGSIPTLGQGGVGGGAPRGQAAAIIRKAQ 137
BLAST of NO15G00210 vs. NCBI_GenBank
Match: OQR90133.1 (hypothetical protein THRCLA_22585 [Thraustotheca clavata]) HSP 1 Score: 148.7 bits (374), Expect = 1.500e-32 Identity = 68/132 (51.52%), Postives = 95/132 (71.97%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDMLKRAPMFKRIKVWKKYHGNVPEL----------GAGVRGQAAVIMQKSQA 123 M+VTGK GVGIP ILLHD EG IVTVE + G+LYRG LDE EDNMN +++D+ +T++ G+++ D VY++G+ + +II PDMLK AP FKR+K+WKK+ G++P L G+G RG A +++K A Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVTVELKNGDLYRGFLDETEDNMNCVLKDAYRTDIRGQQTHCDQVYLRGSQILFIIFPDMLKHAPFFKRVKLWKKHKGSIPALGLGGGSHIGIGSGQRGAAGAMLRKPPA 132
BLAST of NO15G00210 vs. NCBI_GenBank
Match: XP_012202385.1 (hypothetical protein SPRG_07720 [Saprolegnia parasitica CBS 223.65] >KDO27008.1 hypothetical protein SPRG_07720 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 147.9 bits (372), Expect = 2.600e-32 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDMLKRAPMFKRIKVWKKYHGNVPELGAGVRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG IVTVE + G+LYRG LDE EDNMN +++D+ +T++ G +S D VY++G+ + +II PDMLK AP FKR+K+WKK+ G++P LG G G A + + SQ Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVTVELKNGDLYRGFLDETEDNMNCVLKDAYRTDIRGMQSHCDQVYLRGSQILFIIFPDMLKHAPFFKRVKLWKKHKGSIPALGLG--GGAHIGLGNSQ 119
BLAST of NO15G00210 vs. NCBI_GenBank
Match: XP_024586207.1 (40s ribosomal protein s16 [Plasmopara halstedii] >CEG49838.1 40s ribosomal protein s16 [Plasmopara halstedii]) HSP 1 Score: 147.5 bits (371), Expect = 3.300e-32 Identity = 71/138 (51.45%), Postives = 98/138 (71.01%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDM-----------LKRAPMFKRIKVWKKYHGNVPELGAG------VRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG IV++E +TGE YRGLLDE EDNMN +M+++ +T+++G S V+ VY++G+ + +I+ PD+ LK APMFKR+K+WKK+ G +P LG G RGQAA I++K+Q Sbjct: 169 MAVTGKRGVGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKEAVRTDINGNTSHVEQVYLRGSQILFIVFPDIYPLQLYSTHCTLKHAPMFKRVKMWKKHKGAIPTLGQGGVGGGAPRGQAAAIIRKAQ 306
BLAST of NO15G00210 vs. NCBI_GenBank
Match: XP_009531522.1 (hypothetical protein PHYSODRAFT_510917 [Phytophthora sojae] >EGZ14093.1 hypothetical protein PHYSODRAFT_510917 [Phytophthora sojae]) HSP 1 Score: 147.1 bits (370), Expect = 4.400e-32 Identity = 71/140 (50.71%), Postives = 98/140 (70.00%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDM-------------LKRAPMFKRIKVWKKYHGNVPELGAG------VRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG IV++E +TGE YRGLLDE EDNMN +M+D+ +T+++G + V+ VY++G+ + +I+ PD+ LK APMFKR+K+WKK+ G +P LG G RGQAA I++K+Q Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRTDINGNTTHVEQVYLRGSQILFIVFPDIYPLQPHTCGCIFTLKHAPMFKRVKMWKKHKGAIPTLGQGGVGGGAPRGQAAAIIRKAQ 140
BLAST of NO15G00210 vs. NCBI_GenBank
Match: XP_008618962.1 (small nuclear ribonucleoprotein D3 [Saprolegnia diclina VS20] >EQC27542.1 small nuclear ribonucleoprotein D3 [Saprolegnia diclina VS20]) HSP 1 Score: 147.1 bits (370), Expect = 4.400e-32 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDMLKRAPMFKRIKVWKKYHGNVPELGAGVRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG IVTVE + G+LYRG LDE EDNMN +++D+ +T++ G +S D VY++G+ + +II PDMLK AP FKR+K+WKK+ G++P LG G G A + + SQ Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVTVELKNGDLYRGFLDETEDNMNCVLKDAYRTDLRGMQSHCDQVYLRGSQILFIIFPDMLKHAPFFKRVKLWKKHKGSIPALGLG--GGAHIGLGNSQ 119
BLAST of NO15G00210 vs. NCBI_GenBank
Match: POM64681.1 (Sm-like ribonucleo protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 147.1 bits (370), Expect = 4.400e-32 Identity = 71/141 (50.35%), Postives = 99/141 (70.21%), Query Frame = 0 Query: 1 MSVTGKGGVGIPIILLHDAEGGIVTVETRTGELYRGLLDEAEDNMNLIMRDSTKTNVHGKESRVDLVYIKGANVNYIILPDM--------------LKRAPMFKRIKVWKKYHGNVPELGAG------VRGQAAVIMQKSQ 122 M+VTGK GVGIP ILLHD EG IV++E +TGE YRGLLDE EDNMN +M+D+ +T+++G ++V+ VY++G+ + +I+ PD+ LK APMFKR+K+WKK+ G +P LG G RGQAA I++K+Q Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRTDINGNTTQVEQVYLRGSQILFIVFPDIYPLQLGVDALVECTLKHAPMFKRVKMWKKHKGAIPTLGQGGVGGGAPRGQAAAIIRKAQ 141 The following BLAST results are available for this feature:
BLAST of NO15G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00210 ID=NO15G00210|Name=NO15G00210|organism=Nannochloropsis oceanica|type=gene|length=2121bpback to top protein sequence of NO15G00210.1 >NO15G00210.1-protein ID=NO15G00210.1-protein|Name=NO15G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=153bpback to top Synonyms
Publications
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