NO15G00110, NO15G00110 (gene) Nannochloropsis oceanica

Overview
NameNO15G00110
Unique NameNO15G00110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1350
Alignment locationchr15:26100..27449 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:26100..27449 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022074DUF3626
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0005509calcium ion binding
Homology
[Close]
BLAST of NO15G00110 vs. NCBI_GenBank
Match: OLP90704.1 (Calcium-dependent protein kinase 15 [Symbiodinium microadriaticum])

HSP 1 Score: 85.1 bits (209), Expect = 3.400e-13
Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 0 
Query:  156 AVASSLTAYPRLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGTSSGKLCSTSRTTWEDMLFHEAYQEAKAHERLKYGV 257
            A A+   A P L ++F + G     LW  + +I ELAP+++HI L  I P L +  HYRNQFET +S G L    RT WE  LF +AY+ A+   R KYGV
Sbjct: 1174 ARANHEQALPELTERFESLGFPVQDLWMTMAWIRELAPVILHIDLDSITPFLKKDTHYRNQFETKSSRGLLNLEVRTKWERSLFGDAYENAEPFHRPKYGV 1274
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BLAST of NO15G00110 vs. NCBI_GenBank
Match: XP_020619658.1 (uncharacterized protein LOC110057413 [Orbicella faveolata])

HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11
Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 0 
Query:  166 RLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGTSSGKLCSTSRTTWEDMLFHEAYQEAKAHERLKYGV 257
            +LL +    G  E  L   L ++   +P+++HI L ++L  LV+  HYRN+FETGTS G     +R +WED +F+ AY  +   ER+KYGV
Sbjct:   43 KLLARVQGLGYSENDLKRTLQWVRSASPIIVHINLDKVLKFLVKDTHYRNRFETGTSGGSTDKAARKSWEDRIFNNAYHSSPPSERVKYGV 133
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BLAST of NO15G00110 vs. NCBI_GenBank
Match: PFX23696.1 (hypothetical protein AWC38_SpisGene11721 [Stylophora pistillata])

HSP 1 Score: 79.3 bits (194), Expect = 1.900e-11
Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 0 
Query:  160 SLTAYPRLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGTSSGKLCSTSRTTWEDMLFHEAYQEAKAHERLKYGV 257
            S T    LL +    G  E  L   L ++   AP+ IHI L  +L  LV+  HYRN+FETGTS G     +R +WED +F+ AY  +   ER+KYGV
Sbjct: 1149 SKTVASALLARVKRLGYSENDLKRTLQWVRSAAPITIHINLDRVLKFLVDDTHYRNRFETGTSGGSTDVVARKSWEDRIFNSAYHYSNPSERVKYGV 1245
[Close]
BLAST of NO15G00110 vs. NCBI_GenBank
Match: XP_022793694.1 (uncharacterized protein LOC111332596 [Stylophora pistillata])

HSP 1 Score: 79.3 bits (194), Expect = 1.900e-11
Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 0 
Query:  160 SLTAYPRLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGTSSGKLCSTSRTTWEDMLFHEAYQEAKAHERLKYGV 257
            S T    LL +    G  E  L   L ++   AP+ IHI L  +L  LV+  HYRN+FETGTS G     +R +WED +F+ AY  +   ER+KYGV
Sbjct:  143 SKTVASALLARVKRLGYSENDLKRTLQWVRSAAPITIHINLDRVLKFLVDDTHYRNRFETGTSGGSTDVVARKSWEDRIFNSAYHYSNPSERVKYGV 239
[Close]
BLAST of NO15G00110 vs. NCBI_GenBank
Match: OLQ01024.1 (hypothetical protein AK812_SmicGene16255 [Symbiodinium microadriaticum])

HSP 1 Score: 72.8 bits (177), Expect = 1.800e-9
Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 0 
Query:  163 AYPRLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGTSSGKLCSTS--RTTWEDMLFHEAYQEAKAHERLKYG 256
            A P +  +FT  G  EA L   L +I +LAP+ +HI +G +   L    +YR+QFETGTS G L   +  R  WE  LF  AY EAK  ER KYG
Sbjct:  583 ALPDVRDRFTRLGYGEAELQGVLGWIQDLAPMCVHIHIGTVGRFLETDEYYRSQFETGTSCGALDDKNQIRIGWETELFGGAYDEAKPFERCKYG 677
[Close]
BLAST of NO15G00110 vs. NCBI_GenBank
Match: OLQ13063.1 (hypothetical protein AK812_SmicGene2927 [Symbiodinium microadriaticum])

HSP 1 Score: 72.8 bits (177), Expect = 1.800e-9
Identity = 37/94 (39.36%), Postives = 52/94 (55.32%), Query Frame = 0 
Query:  163 AYPRLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGTSSGKLCSTSRTTWEDMLFHEAYQEAKAHERLKYGV 257
            A P L ++ +  G  +  LWT L+++ + APL++HI    +   ++E  HYR+QFETG S G      R  WE  LF  AY   +  ER KYGV
Sbjct:  300 ALPVLQRRVSKLGYKDMDLWTTLSWVRDFAPLIVHIHFDRMWQFIIEDTHYRSQFETGKSCGLNNREVRDRWERDLFQGAYSGCRDFERPKYGV 393
[Close]
BLAST of NO15G00110 vs. NCBI_GenBank
Match: OLP88702.1 (Caskin-1 [Symbiodinium microadriaticum])

HSP 1 Score: 70.5 bits (171), Expect = 8.700e-9
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 0 
Query:  158 ASSLTAYPRLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGTSSGKL--CSTSRTTWEDMLFHEAYQEAKAHERLKYG 256
            A S  A  R+L +F   G  +  L   L++I +LAP++IH+ +  +   L    +YR+QFET TS G +   + +R TWE  LF +AY +AK  ER KYG
Sbjct:  974 ALSQDAEKRVLARFEEMGFSDKELQAVLSWIQDLAPVIIHVNIDTVGRFLESDEYYRSQFETKTSYGAIDEGNQTRITWERDLFGDAYDDAKPFERCKYG 1073
The following BLAST results are available for this feature:
BLAST of NO15G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 7
Match NameE-valueIdentityDescription
OLP90704.13.400e-1344.55Calcium-dependent protein kinase 15 [Symbiodinium ... [more]
XP_020619658.11.100e-1140.66uncharacterized protein LOC110057413 [Orbicella fa... [more]
PFX23696.11.900e-1142.27hypothetical protein AWC38_SpisGene11721 [Stylopho... [more]
XP_022793694.11.900e-1142.27uncharacterized protein LOC111332596 [Stylophora p... [more]
OLQ01024.11.800e-945.26hypothetical protein AK812_SmicGene16255 [Symbiodi... [more]
OLQ13063.11.800e-939.36hypothetical protein AK812_SmicGene2927 [Symbiodin... [more]
OLP88702.18.700e-940.00Caskin-1 [Symbiodinium microadriaticum][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL149nonsL149Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR095ngnoR095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00110.1NO15G00110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|435464gene_4564Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00110.1NO15G00110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00110 ID=NO15G00110|Name=NO15G00110|organism=Nannochloropsis oceanica|type=gene|length=1350bp
ATGGCCCACACCACACACCGTACATCACACAGCACACACTATCTCCAAAA
CTATAGGAACCTTGGCGATGACGTGTGTTACACTGCTATTCCATCTATTT
CAGAGCAACGGGAAGCTACCAAGGGGATAAACACCACTACCAAGAGCAGG
AGCCATGACTGCAGCTCGGACAATTATCAAAACCCAGTGACAGCACCAAC
AACAACTCGAGGATCGAGCAAGACAGCGGCTGCAAGATGTATAGATGCTG
CAGCAGGGGCACTGCAGCGTTTGCCCTTGTCCGACACTACAACCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTTTTCCTCATCCCTCTCCTCCTCTACCACCACCACCTACAACTACT
ACTCTATCTCCCCTCCTCCACTACCTCCTTCTGTTCGTCCGgtatgtctt
ttcatacgtctcccagcgatatgaccagttttgttgctgctgctgttaca
gctgttgctacttgcactcctgcagctgccattattacccatccctcccc
ctccgattccactctcggtattttgacgaggtatattgctacagcccagc
gtctcacctcggtacacctcaccagtcgttccactgccccaacaccatct
acctcccctgctccagtacattctgcttctccgttaccgtcttgcccttc
ctcctcatcatcctccttatccccctttctcccttgctggcccactatcc
agaccgtcaccgcctgtctccgatctcagcttgcctttgatcatctctcc
atcactctctgtcaacgccagGCCCTCCTCCTCATGCAGCGTGAAGCCGT
CGCGTCATCCCTTACCGCCTACCCCCGTTTGCTCCAGCAATTCACCGCAT
GGGGCCTCGACGAGGCGGCCCTTTGGACCTGCCTGACCTACATCCTAGAA
CTAGCCCCCCTTGTCATCCACATCAAGCTTGGTGAGATCTTGCCGAAACT
CGTGGAAGGCATCCACTATCGGAATCAGgtagggaaggaggaaaggaggg
agtgaagggggacgagggacggagaaccggagagaaaggaggaggtaggg
atggatggaggctgggaggggagagcaatgttatcaacttactaaatttt
ccgtgtcattgtgaaccttgacactccatctccccatcccctcgatcctc
ccccctctcctccttccccgcccttagTTTGAGACCGGCACTTCCTCTGG
GAAGCTCTGCAGCACCAGTCGCACGACATGGGAGGACATGCTCTTCCACG
AGGCATACCAGGAGGCCAAGGCGCACGAGCGGCTCAAGTACGGGGTATGA
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protein sequence of NO15G00110.1

>NO15G00110.1-protein ID=NO15G00110.1-protein|Name=NO15G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=257bp
MAHTTHRTSHSTHYLQNYRNLGDDVCYTAIPSISEQREATKGINTTTKSR
SHDCSSDNYQNPVTAPTTTRGSSKTAAARCIDAAAGALQRLPLSDTTTSS
SSSSSSSSSSSSSSSSSSFSSSLSSSTTTTYNYYSISPPPLPPSVRPALL
LMQREAVASSLTAYPRLLQQFTAWGLDEAALWTCLTYILELAPLVIHIKL
GEILPKLVEGIHYRNQFETGTSSGKLCSTSRTTWEDMLFHEAYQEAKAHE
RLKYGV*
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Synonyms
Publications