NO14G03270, NO14G03270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G03270 vs. NCBI_GenBank
Match: XP_005853860.1 (large subunit ribosomal protein L10e [Nannochloropsis gaditana CCMP526] >EKU22501.1 large subunit ribosomal protein L10e [Nannochloropsis gaditana CCMP526] >EWM24475.1 large subunit ribosomal protein l10e [Nannochloropsis gaditana]) HSP 1 Score: 419.5 bits (1077), Expect = 7.300e-114 Identity = 200/212 (94.34%), Postives = 205/212 (96.70%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGKKPGT 244 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNK+ADVG+YPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKD+YHIRVRMHP+HVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQ MISVRCKDVHQ HAIEALRRAKFKFPGRQKILKSNKWGFT WDRE+YVR RLDGTLI DGVGVKYV QHGPLGKK GT Sbjct: 1 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKKADVGMYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDSYHIRVRMHPFHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQAMISVRCKDVHQVHAIEALRRAKFKFPGRQKILKSNKWGFTNWDREDYVRGRLDGTLIGDGVGVKYVPQHGPLGKKAGT 212
BLAST of NO14G03270 vs. NCBI_GenBank
Match: CBN75612.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 312.4 bits (799), Expect = 1.300e-81 Identity = 146/208 (70.19%), Postives = 175/208 (84.13%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGK 240 MGRRPARCYRF K KP+IKSRY RGVPD KIRI++ GNK+A V +P VVH+VSDEKEQ++SEA+EAARV+ NKYM K AGKD +H+R+R HP+HVLR++KMLSCAGADRL GMRH++GKP G AR+ IGQ++IS+R KD H+ A+EALRRAKFKFPGRQKIL+SNKWGFT++ REEYVR R +G L DG VKY+AQHGPL K Sbjct: 1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDDFPMVVHLVSDEKEQLTSEALEAARVSANKYMAKFAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPQGTTARVAIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYPREEYVRGRKEGWLQKDGNSVKYIAQHGPLAK 208
BLAST of NO14G03270 vs. NCBI_GenBank
Match: XP_009037883.1 (hypothetical protein AURANDRAFT_27934 [Aureococcus anophagefferens] >EGB07250.1 hypothetical protein AURANDRAFT_27934 [Aureococcus anophagefferens]) HSP 1 Score: 302.0 bits (772), Expect = 1.700e-78 Identity = 142/210 (67.62%), Postives = 166/210 (79.05%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGKKP 242 MGRRPARC RF K KPYIKSRY RGVPD KIRIFD GNK+A V +P V H+VSDEKEQISS A+EAARVACNKY++KN GK+ YHIR R HP+HV+R +KMLSCAGADRLS GMRHS+GKP + AR+ IGQ ++SVR KD + + ALRRAKFKFPGRQKILKS KWGFT++DRE YV+ R + L+A G VKY+ HG +G P Sbjct: 1 MGRRPARCSRFQKNKPYIKSRYCRGVPDPKIRIFDCGNKKASVDQFPFVAHLVSDEKEQISSNALEAARVACNKYLIKNCGKEAYHIRTRAHPFHVIRQNKMLSCAGADRLSSGMRHSYGKPMERAARVSIGQAVLSVRAKDANADAVLVALRRAKFKFPGRQKILKSAKWGFTKFDRETYVKGRQEKWLVAAGSSVKYITPHGRIGASP 210
BLAST of NO14G03270 vs. NCBI_GenBank
Match: KHN86188.1 (60S ribosomal protein L10 [Toxocara canis]) HSP 1 Score: 299.3 bits (765), Expect = 1.100e-77 Identity = 137/208 (65.87%), Postives = 169/208 (81.25%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGK 240 MGRRPARCYR+ K KPY KSR+ RGVPD KIRIFD G K+ADV +P VHM+S+E+E +SSEA+EAAR+ NKYM+KN GKD +H+RVR HPYHV+R++KMLSCAGADRL GMR +FGKP G VAR++IG ++ISVR K+ H HA+EA RRAKFKFPGRQ I+ S KWGFT+WD+++Y R R +G L++DGVG K V +HGPL K Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDPKIRIFDLGKKKADVDEFPLCVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHMRVRKHPYHVVRINKMLSCAGADRLQTGMRGAFGKPQGLVARVDIGDLLISVRVKEQHGEHAVEAFRRAKFKFPGRQLIVVSRKWGFTKWDKDDYERMRTEGRLVSDGVGCKLVREHGPLSK 208
BLAST of NO14G03270 vs. NCBI_GenBank
Match: GBG33870.1 (60S ribosomal protein L10 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 297.7 bits (761), Expect = 3.200e-77 Identity = 141/211 (66.82%), Postives = 173/211 (81.99%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGKKPG 243 M RRPARCYR+ K KPYIKSRYLRGVP+ K++I+D G K+A V ++P V HM SDE+EQISSEA+EAAR+ACNKY++KNAGKD +H+R+R HP+HVLR++KMLSCAGADRL GMRH++GKPAG VAR++IGQ++ISVR K A+EALRR+K KFPGRQKI+ S KWGFT++D EYVR R +G LI DG KYV +HGPL K PG Sbjct: 1 MARRPARCYRYCKNKPYIKSRYLRGVPEPKLKIYDVGAKKAGVDVFPAVCHMFSDEREQISSEALEAARIACNKYLVKNAGKDAFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPAGVVARVKIGQILISVRTKKQTLPVAMEALRRSKMKFPGRQKIVASKKWGFTKYDTAEYVRMRKEGFLIPDGNQAKYVPRHGPL-KVPG 210
BLAST of NO14G03270 vs. NCBI_GenBank
Match: XP_002183263.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45481.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 295.4 bits (755), Expect = 1.600e-76 Identity = 143/208 (68.75%), Postives = 165/208 (79.33%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGK 240 MGRRPARCYR+ K KPYIKSRY RGVP+SKIRIFD G K+A V +P V H+V DEK+QISSEA+EA RVA NK++ KN GKD +HIR+R HP+HVLR +KMLSCAGADRLS GMRHS+GKP G AR++IGQ++ISVR KD H+ H IEA+RR KFKF GRQKILKS KWGFT + REEYVR R G L ADG VK + GPL K Sbjct: 1 MGRRPARCYRYQKNKPYIKSRYCRGVPESKIRIFDVGAKKAPVDQFPFVAHLVCDEKQQISSEALEACRVAINKHLSKNIGKDAFHIRIRAHPFHVLRANKMLSCAGADRLSSGMRHSYGKPIGVAARVDIGQILISVRSKDTHEAHVIEAIRRGKFKFAGRQKILKSLKWGFTSYPREEYVRMRRCGELSADGNIVKVHNRRGPLEK 208
BLAST of NO14G03270 vs. NCBI_GenBank
Match: XP_010554311.1 (PREDICTED: 60S ribosomal protein L10-1 [Tarenaya hassleriana]) HSP 1 Score: 295.4 bits (755), Expect = 1.600e-76 Identity = 140/212 (66.04%), Postives = 172/212 (81.13%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGKK-PG 243 MGRRPARCYR K KPY KSRY RGVPD+KIRI+D G KR V +P VH+VS EKE +SSEA+EAAR+ACNKYM+K+AGKD +H+RVR+HP+HVLR++KMLSCAGADRL GMR +FGKP G AR+ IGQV++SVRCKD H HHA EALRRAKFKFPGRQKI+ S KWGFT++ R +Y++ R + ++ DGV K+++ HGPL K+ PG Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDAKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFRQEKRIVPDGVNAKFLSCHGPLAKREPG 212
BLAST of NO14G03270 vs. NCBI_GenBank
Match: XP_002109194.1 (conserved hypothetical protein [Trichoplax adhaerens] >EDV27360.1 conserved hypothetical protein [Trichoplax adhaerens]) HSP 1 Score: 295.0 bits (754), Expect = 2.100e-76 Identity = 136/206 (66.02%), Postives = 169/206 (82.04%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPL 238 MGRRPARCYR+ K K Y KSR+ RGVPD KIRI+D G K+A+V +P +H+VSDE EQ+SSEA+EAAR+ CNKYM+K KD +HIR+R+HP+HVLR++KMLSCAGADRL GMR +FGKP G VAR++IGQ +IS+R KD HQ AIEALRRAKFKFPGRQKI S KWGFT+WD+E+Y++ + DG L++DGVG +Y+ HGPL Sbjct: 1 MGRRPARCYRYCKNKAYPKSRFCRGVPDPKIRIYDLGRKKANVEDFPTCIHLVSDEFEQLSSEALEAARICCNKYMVKYTAKDQFHIRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPYGTVARVKIGQPLISIRTKDNHQAKAIEALRRAKFKFPGRQKIYVSKKWGFTKWDKEDYLQMQQDGKLLSDGVGCQYLKDHGPL 206
BLAST of NO14G03270 vs. NCBI_GenBank
Match: ALS05057.1 (60S ribosomal protein L10 [Centropages tenuiremis]) HSP 1 Score: 294.7 bits (753), Expect = 2.700e-76 Identity = 136/206 (66.02%), Postives = 165/206 (80.10%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPL 238 MGRRPARCYR+ K KPY KSR+ RGVPD KIRIFD G K+A V +P +H+VSDE EQ+SSEAMEAAR+ CNKY++KN GKD +HIRVR+HP+HVLR++KMLSC GADRL GMR +FGK G VAR+ IGQ+++SVR D H+ IE+LRR+KFKFPGRQKI S KWGFT+WDRE+Y + R +G L+ DGVGV+Y HGPL Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKKAGVDEFPLSIHLVSDELEQLSSEAMEAARICCNKYLVKNCGKDQFHIRVRVHPFHVLRINKMLSCVGADRLQTGMRGAFGKAHGTVARVRIGQILLSVRSSDKHKAEVIESLRRSKFKFPGRQKIYVSKKWGFTKWDREDYEKMRANGQLLTDGVGVQYRPDHGPL 206
BLAST of NO14G03270 vs. NCBI_GenBank
Match: XP_002630308.1 (C. briggsae CBR-RPL-10 protein [Caenorhabditis briggsae] >CAP21914.1 Protein CBR-RPL-10 [Caenorhabditis briggsae]) HSP 1 Score: 294.7 bits (753), Expect = 2.700e-76 Identity = 133/208 (63.94%), Postives = 171/208 (82.21%), Query Frame = 0 Query: 32 MGRRPARCYRFHKKKPYIKSRYLRGVPDSKIRIFDGGNKRADVGLYPCVVHMVSDEKEQISSEAMEAARVACNKYMLKNAGKDTYHIRVRMHPYHVLRMSKMLSCAGADRLSQGMRHSFGKPAGKVARIEIGQVMISVRCKDVHQHHAIEALRRAKFKFPGRQKILKSNKWGFTEWDREEYVRRRLDGTLIADGVGVKYVAQHGPLGK 240 MGRRPARCYR+ K KPY KSR+ RGVPD+KIRIFD GNK+A+V ++P VHM+S+E+E +SSEA+EAAR+ NKYM+KN GKD +H+RVR HP+HV R++KMLSCAGADRL GMR ++GKP G VAR++IG ++ S+R K+ + HAIEA RRAKFKFPGRQ I+ S KWGFT+WDR++YVR + +G L++DGVGV+ +HGPL K Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKKANVEVFPYTVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEANVKHAIEAFRRAKFKFPGRQIIVTSRKWGFTKWDRDDYVRMKAEGRLVSDGVGVQLNREHGPLSK 208 The following BLAST results are available for this feature:
BLAST of NO14G03270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G03270 ID=NO14G03270|Name=NO14G03270|organism=Nannochloropsis oceanica|type=gene|length=3824bpback to top protein sequence of NO14G03270.1 >NO14G03270.1-protein ID=NO14G03270.1-protein|Name=NO14G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bpback to top Synonyms
Publications
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