NO14G03210, NO14G03210 (gene) Nannochloropsis oceanica

Overview
NameNO14G03210
Unique NameNO14G03210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3660
Alignment locationchr14:959858..963517 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:959858..963517 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL136nonsL136Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR041ncniR041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003280NSK003280Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G03210.1NO14G03210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G03210.2NO14G03210.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590769gene_5900Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|615584gene_11747Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G03210.1NO14G03210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G03210.2NO14G03210.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G03210 ID=NO14G03210|Name=NO14G03210|organism=Nannochloropsis oceanica|type=gene|length=3660bp
AAACCCACAGATAGTCACTTTGACCTCGCATTAACCATGCCTGCAGCCAA
ATCGGCCGTTACAAAAACTGGTGCTGCTGTGCGCAGCAGCAAGCGGAAGG
AGGCTCCTGCTTCCACTGGCGCTGCCGCTAAGAAGAGCAGGGAAGCGACG
GCTAAGCCCTCCACAAAGAACGTCCCTGTCTCTAAGGCTGCTGCTGTGGC
GTCGACAAGCAAAAAAGGAACCAGCGGGAAGACGGGTGTCAAACCTATGG
CAGCCCCTGCAACTGTTGCCAAAAAAAGCAAGATGGTGGCCAAGGGCAAG
GCTGCCCCCGCCGTGAAGAAGACGGCTTCTTCCTCCCCCTCCGAGGCCTC
GCCTAAGCAGGCTAAAAAGATTACGCTGGTAAGGGCTCCCATCGCCTCTA
CAAATGTAGCTGCTAAGGGCAAAGGAGGCAAGGAGGTGGAGGCAATGGAC
CGCAAGAGCTTGCAGgtacggacgaccaaattatacagagcagggacaac
gtaagggcatagacgaggggttgaattcgtaaagccagacagaaaagccg
tgattgctataaatcttacgagagggtattgagttatattgcggagacgg
gacccgctatcgcaagccatttcgacgcaactcacgccccttcgtttcat
atctttatatctcttgtacctcaccctactgatgtgccacccacagGCGC
TCGCCAAATCGCTGGGCTTGAAGGCGAACGCCAAGACCTCGGATCTTCTC
GCCGCCGTCCTCAGGGAGCAAAAGGCTGCCAGCGCTTCGTCCTCATTTTC
ACCTTCGACCACCACCACCGCCAGCACCAGCAGCAAGGAGAAGGGGAAAA
AGCCTACGGATGAGCTGGAGGAGATTCCCCGgtaagtacaagagggaagg
gggaaagaaggggttgaagagaagagagatagagacagacgaattggtgc
atgcatacggctaatgaactaaaaacaagtttttcgacataattcgacac
acacatattttcaatttctccatccctctttcccttctgccacccctccc
tcccttcctcccttcttcccgtcccagCGCCAAGCTGGTTGCCCTCGCGA
AGCGAGTGGGTGTCAAGGCCAACCTGGGCACCGCCAAAATGATCGCCGCC
ATCAGgtactggactcaggaggaattaaagattgaaggaaaggagggagg
gaagggggatgtgagagaaggaatgaaagaagcacaacgatggcatgttc
cacccctctcgactcagtgccatccttcctcgacatccgccactctatcc
acctgtacagGGCCAAGCAGTCTGCCTCCTCCTCCTCCACCTTCTCCTCC
TCTTCCACCCCCGCTCCTCCGTCACGTCGGCAATCAGGTGCCACAACAGC
CACTGCCGCCACGACGGAGGAAGGAGAGTGGGAGGAAGACTCTCCACCCC
GGGAAGGCCGTCGGTCCTCGACTCGTGGTTCGATCCCTCCAGTCCCTGCC
TACCTCAAGTGCAAAGACGTCTCGCCCTCCTTTGACCGCCTGGCCTACAT
CAAAAACTCCCGCATGACGGCCCGGGAGAATGAAAGAAAGGCGTTTATAT
TCCGCAAGgtgagagagggaggaagggagagagggagaaagagagggaga
gtgggatggggaaaactcttagtcctctaaccccttcattcacgtctcct
ccatctccatcccactctcctttcctatattcttctctctctcacctctc
gttttccagACCTCCACTGAGGTGGCTCGCATCAGCAAGTCCCGTTTCGT
GCACAGCAAAAATCCCGACGCCGTTCGTGGCCGGTGGTGAGGGAGCATGT
GGAGGGGACAGGGGGAGGGACGACGGGGAAGCATTTTTACTTTTATTGCG
GCCCATGCCACACCGCGCTTTCCCTCTATTCTCCATCCTTTCCTGCTGTT
CCCGTGACCACCTCACTCATAATACACGCATGCATCCTCTTCCTCCCTTC
CTCCCTTCCTCCCTCTTTCCCTCCTGCATATCCACAGCGCCACCTCCCAC
CCCAAGATCCAGCAGAAGCGTAACTACGCCCTCGAAGCCACCAAAAGCCA
GCAGCAGTTCAAGGCCAGGTCCACGGTCATGAAGGGAGGCATCAAGCTCA
AGCCCAAGGAGCCTCGTTTCATGAAGGAAAACCGCAAAgtgagtgtatct
gccttttctctctctttctccctgtccgtccttccagagtagaggcagag
gtagtggccatgaaattattcagcgtattcttccattataagcttcttcc
ctccctcttttgtcttccctccctcgccagGCGAAGATGCAGGAGGCCGC
CGTGAAGCACGCGGTGGACTCGATGCAGAAAACCTTGACCCGCCCCCCGA
AGAGGGTCCGCACCCCGGTCAAGCAAGgtgcgaggaagggaaggagggag
ggagggagggaggatgtttatcaccgcattcatgtactgaatggatcgat
gctcatccagctgtactatggaccccaaccctctctctctccctcccttc
cttccccccttcctcgtggtagGCCTGAAGAGTGCCGGGCTGATCCGCCG
TAGGAAGTTCGTTGACAGCGCGTCCATCAAGCGCCAAGCCCTCTATGAGA
AGAATCGTCTCCAAGCACTTAAGGAGACAAGCAAGGAGTGAAGGGAATAC
GGAAATGAGGTGATCAAGTAGCAGGTGCTTCAAGGAGTTAGAAGAGAGAA
AGAGAGGCGCAGGTATAGGGGATGGATCGGAGGTACTTGTCATGTAATGT
ATTTTTCTTCAGGGTAGGGGGGGGGGAGACGAAGAGGGCGAGGCTGAGTG
AATAGCTGTTGTGCGCATAGGTAGGGAAACAGTCTGTCGGGTGGACGAAG
GTGAGTGACTGATGCAACAGTAACTTACTCCTTGTCAGAACTTTTTGAAG
TATATGCATGCATTACTTTCACTCATGGCCGTGTTTCTCGCGTCCAAAGG
CGTCGTGCGCCCGTGCATGTTAATAATGGGGGAGGGAAGATGACTGGAGA
CGTGCGTTTTGGCTGGAGCTCCTCTTGCACTCGTCACGGATACAGGACTT
TTGTGACTGGTCGCGGGGAAAGTGACGGGACTACTTGGAGGCCACGGGGG
CGGAAGAGGGACAAAATACGATCTAGGATCATATAATCAAGAAAGTAACA
GTAACACTCAATCAATCACGAGGTGCCGAGAGGAAGGTGAGTAAATGAGC
CCACGTACCGAATGCAATTTGACGGATCGCTGCGTGAGAGACGAAGAGGA
TGTGGAGGGAGGGACGACGACGAGTGAGGGAGTTGGTAACGAGAGAGGGA
TAGAAAGATATAACGTATGACAATGAGGTGTAGGAGCAAGGAAGCTAGCA
AACGGAGGAGAAATGAAAAAGAGAGGCGCGAGTGCAGCGAACATAGAAAG
GCTTGAGGGGAAAGCACGACGTGGTTGTGAGGGCCCGCAGAACGGTAAAG
GTAGAAAGAAAATGACCTGGGATTAAAGGACAACAATAGAAAGAAATGGA
TATGGTTGGTGTTCGCACAAGCTTCACTAGGCATTTAACAAATCACAAAT
CTAAACGATACTGGATTTGAGAGCGAATTCACTGATCCTGTCTGGTACTT
TCCCTTTCTT
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protein sequence of NO14G03210.1

>NO14G03210.1-protein ID=NO14G03210.1-protein|Name=NO14G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=478bp
MPAAKSAVTKTGAAVRSSKRKEAPASTGAAAKKSREATAKPSTKNVPVSK
AAAVASTSKKGTSGKTGVKPMAAPATVAKKSKMVAKGKAAPAVKKTASSS
PSEASPKQAKKITLVRAPIASTNVAAKGKGGKEVEAMDRKSLQALAKSLG
LKANAKTSDLLAAVLREQKAASASSSFSPSTTTTASTSSKEKGKKPTDEL
EEIPRAKLVALAKRVGVKANLGTAKMIAAIRAKQSASSSSTFSSSSTPAP
PSRRQSGATTATAATTEEGEWEEDSPPREGRRSSTRGSIPPVPAYLKCKD
VSPSFDRLAYIKNSRMTARENERKAFIFRKTSTEVARISKSRFVHSKNPD
AVRGRCATSHPKIQQKRNYALEATKSQQQFKARSTVMKGGIKLKPKEPRF
MKENRKAKMQEAAVKHAVDSMQKTLTRPPKRVRTPVKQGLKSAGLIRRRK
FVDSASIKRQALYEKNRLQALKETSKE*
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protein sequence of NO14G03210.2

>NO14G03210.2-protein ID=NO14G03210.2-protein|Name=NO14G03210.2|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MPAAKSAVTKTGAAVRSSKRKEAPASTGAAAKKSREATAKPSTKNVPVSK
AAAVASTSKKGTSGKTGVKPMAAPATVAKKSKMVAKGKAAPAVKKTASSS
PSEASPKQAKKITLVRAPIASTNVAAKGKGGKEVEAMDRKSLQALAKSLG
LKANAKTSDLLAAVLREQKAASASSSFSPSTTTTASTSSKEKGKKPTDEL
EEIPRAKLVALAKRVGVKANLGTAKMIAAIRAKQSASSSSTFSSSSTPAP
PSRRQSGATTATAATTEEGEWEEDSPPREGRRSSTRGSIPPVPAYLKCKD
VSPSFDRLAYIKNSRMTARENERKAFIFRKTSTEVARISKSRFVHSKNPD
AVRGRW*
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Synonyms
Publications