NO14G03210.1, NO14G03210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G03210.1
Unique NameNO14G03210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2439
Alignment locationchr14:959858..963517 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:959858..963517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G03210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G03210NO14G03210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G03210.1NO14G03210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G03210.1.cds1NO14G03210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03210.1.cds2NO14G03210.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03210.1.cds3NO14G03210.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03210.1.cds4NO14G03210.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03210.1.cds5NO14G03210.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03210.1.cds6NO14G03210.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03210.1.cds7NO14G03210.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03210.1.cds8NO14G03210.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G03210.1 ID=NO14G03210.1|Name=NO14G03210.1|organism=Nannochloropsis oceanica|type=mRNA|length=2439bp
AAACCCACAGATAGTCACTTTGACCTCGCATTAACCATGCCTGCAGCCAA
ATCGGCCGTTACAAAAACTGGTGCTGCTGTGCGCAGCAGCAAGCGGAAGG
AGGCTCCTGCTTCCACTGGCGCTGCCGCTAAGAAGAGCAGGGAAGCGACG
GCTAAGCCCTCCACAAAGAACGTCCCTGTCTCTAAGGCTGCTGCTGTGGC
GTCGACAAGCAAAAAAGGAACCAGCGGGAAGACGGGTGTCAAACCTATGG
CAGCCCCTGCAACTGTTGCCAAAAAAAGCAAGATGGTGGCCAAGGGCAAG
GCTGCCCCCGCCGTGAAGAAGACGGCTTCTTCCTCCCCCTCCGAGGCCTC
GCCTAAGCAGGCTAAAAAGATTACGCTGGTAAGGGCTCCCATCGCCTCTA
CAAATGTAGCTGCTAAGGGCAAAGGAGGCAAGGAGGTGGAGGCAATGGAC
CGCAAGAGCTTGCAGGCGCTCGCCAAATCGCTGGGCTTGAAGGCGAACGC
CAAGACCTCGGATCTTCTCGCCGCCGTCCTCAGGGAGCAAAAGGCTGCCA
GCGCTTCGTCCTCATTTTCACCTTCGACCACCACCACCGCCAGCACCAGC
AGCAAGGAGAAGGGGAAAAAGCCTACGGATGAGCTGGAGGAGATTCCCCG
CGCCAAGCTGGTTGCCCTCGCGAAGCGAGTGGGTGTCAAGGCCAACCTGG
GCACCGCCAAAATGATCGCCGCCATCAGGGCCAAGCAGTCTGCCTCCTCC
TCCTCCACCTTCTCCTCCTCTTCCACCCCCGCTCCTCCGTCACGTCGGCA
ATCAGGTGCCACAACAGCCACTGCCGCCACGACGGAGGAAGGAGAGTGGG
AGGAAGACTCTCCACCCCGGGAAGGCCGTCGGTCCTCGACTCGTGGTTCG
ATCCCTCCAGTCCCTGCCTACCTCAAGTGCAAAGACGTCTCGCCCTCCTT
TGACCGCCTGGCCTACATCAAAAACTCCCGCATGACGGCCCGGGAGAATG
AAAGAAAGGCGTTTATATTCCGCAAGACCTCCACTGAGGTGGCTCGCATC
AGCAAGTCCCGTTTCGTGCACAGCAAAAATCCCGACGCCGTTCGTGGCCG
GTGCGCCACCTCCCACCCCAAGATCCAGCAGAAGCGTAACTACGCCCTCG
AAGCCACCAAAAGCCAGCAGCAGTTCAAGGCCAGGTCCACGGTCATGAAG
GGAGGCATCAAGCTCAAGCCCAAGGAGCCTCGTTTCATGAAGGAAAACCG
CAAAGCGAAGATGCAGGAGGCCGCCGTGAAGCACGCGGTGGACTCGATGC
AGAAAACCTTGACCCGCCCCCCGAAGAGGGTCCGCACCCCGGTCAAGCAA
GGCCTGAAGAGTGCCGGGCTGATCCGCCGTAGGAAGTTCGTTGACAGCGC
GTCCATCAAGCGCCAAGCCCTCTATGAGAAGAATCGTCTCCAAGCACTTA
AGGAGACAAGCAAGGAGTGAAGGGAATACGGAAATGAGGTGATCAAGTAG
CAGGTGCTTCAAGGAGTTAGAAGAGAGAAAGAGAGGCGCAGGTATAGGGG
ATGGATCGGAGGTACTTGTCATGTAATGTATTTTTCTTCAGGGTAGGGGG
GGGGGAGACGAAGAGGGCGAGGCTGAGTGAATAGCTGTTGTGCGCATAGG
TAGGGAAACAGTCTGTCGGGTGGACGAAGGTGAGTGACTGATGCAACAGT
AACTTACTCCTTGTCAGAACTTTTTGAAGTATATGCATGCATTACTTTCA
CTCATGGCCGTGTTTCTCGCGTCCAAAGGCGTCGTGCGCCCGTGCATGTT
AATAATGGGGGAGGGAAGATGACTGGAGACGTGCGTTTTGGCTGGAGCTC
CTCTTGCACTCGTCACGGATACAGGACTTTTGTGACTGGTCGCGGGGAAA
GTGACGGGACTACTTGGAGGCCACGGGGGCGGAAGAGGGACAAAATACGA
TCTAGGATCATATAATCAAGAAAGTAACAGTAACACTCAATCAATCACGA
GGTGCCGAGAGGAAGGTGAGTAAATGAGCCCACGTACCGAATGCAATTTG
ACGGATCGCTGCGTGAGAGACGAAGAGGATGTGGAGGGAGGGACGACGAC
GAGTGAGGGAGTTGGTAACGAGAGAGGGATAGAAAGATATAACGTATGAC
AATGAGGTGTAGGAGCAAGGAAGCTAGCAAACGGAGGAGAAATGAAAAAG
AGAGGCGCGAGTGCAGCGAACATAGAAAGGCTTGAGGGGAAAGCACGACG
TGGTTGTGAGGGCCCGCAGAACGGTAAAGGTAGAAAGAAAATGACCTGGG
ATTAAAGGACAACAATAGAAAGAAATGGATATGGTTGGTGTTCGCACAAG
CTTCACTAGGCATTTAACAAATCACAAATCTAAACGATACTGGATTTGAG
AGCGAATTCACTGATCCTGTCTGGTACTTTCCCTTTCTT
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protein sequence of NO14G03210.1

>NO14G03210.1-protein ID=NO14G03210.1-protein|Name=NO14G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=478bp
MPAAKSAVTKTGAAVRSSKRKEAPASTGAAAKKSREATAKPSTKNVPVSK
AAAVASTSKKGTSGKTGVKPMAAPATVAKKSKMVAKGKAAPAVKKTASSS
PSEASPKQAKKITLVRAPIASTNVAAKGKGGKEVEAMDRKSLQALAKSLG
LKANAKTSDLLAAVLREQKAASASSSFSPSTTTTASTSSKEKGKKPTDEL
EEIPRAKLVALAKRVGVKANLGTAKMIAAIRAKQSASSSSTFSSSSTPAP
PSRRQSGATTATAATTEEGEWEEDSPPREGRRSSTRGSIPPVPAYLKCKD
VSPSFDRLAYIKNSRMTARENERKAFIFRKTSTEVARISKSRFVHSKNPD
AVRGRCATSHPKIQQKRNYALEATKSQQQFKARSTVMKGGIKLKPKEPRF
MKENRKAKMQEAAVKHAVDSMQKTLTRPPKRVRTPVKQGLKSAGLIRRRK
FVDSASIKRQALYEKNRLQALKETSKE*
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mRNA from alignment at chr14:959858..963517+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G03210.1 ID=NO14G03210.1|Name=NO14G03210.1|organism=Nannochloropsis oceanica|type=mRNA|length=3660bp|location=Sequence derived from alignment at chr14:959858..963517+ (Nannochloropsis oceanica)
AAACCCACAGATAGTCACTTTGACCTCGCATTAACCATGCCTGCAGCCAA
ATCGGCCGTTACAAAAACTGGTGCTGCTGTGCGCAGCAGCAAGCGGAAGG
AGGCTCCTGCTTCCACTGGCGCTGCCGCTAAGAAGAGCAGGGAAGCGACG
GCTAAGCCCTCCACAAAGAACGTCCCTGTCTCTAAGGCTGCTGCTGTGGC
GTCGACAAGCAAAAAAGGAACCAGCGGGAAGACGGGTGTCAAACCTATGG
CAGCCCCTGCAACTGTTGCCAAAAAAAGCAAGATGGTGGCCAAGGGCAAG
GCTGCCCCCGCCGTGAAGAAGACGGCTTCTTCCTCCCCCTCCGAGGCCTC
GCCTAAGCAGGCTAAAAAGATTACGCTGGTAAGGGCTCCCATCGCCTCTA
CAAATGTAGCTGCTAAGGGCAAAGGAGGCAAGGAGGTGGAGGCAATGGAC
CGCAAGAGCTTGCAGGTACGGACGACCAAATTATACAGAGCAGGGACAAC
GTAAGGGCATAGACGAGGGGTTGAATTCGTAAAGCCAGACAGAAAAGCCG
TGATTGCTATAAATCTTACGAGAGGGTATTGAGTTATATTGCGGAGACGG
GACCCGCTATCGCAAGCCATTTCGACGCAACTCACGCCCCTTCGTTTCAT
ATCTTTATATCTCTTGTACCTCACCCTACTGATGTGCCACCCACAGGCGC
TCGCCAAATCGCTGGGCTTGAAGGCGAACGCCAAGACCTCGGATCTTCTC
GCCGCCGTCCTCAGGGAGCAAAAGGCTGCCAGCGCTTCGTCCTCATTTTC
ACCTTCGACCACCACCACCGCCAGCACCAGCAGCAAGGAGAAGGGGAAAA
AGCCTACGGATGAGCTGGAGGAGATTCCCCGGTAAGTACAAGAGGGAAGG
GGGAAAGAAGGGGTTGAAGAGAAGAGAGATAGAGACAGACGAATTGGTGC
ATGCATACGGCTAATGAACTAAAAACAAGTTTTTCGACATAATTCGACAC
ACACATATTTTCAATTTCTCCATCCCTCTTTCCCTTCTGCCACCCCTCCC
TCCCTTCCTCCCTTCTTCCCGTCCCAGCGCCAAGCTGGTTGCCCTCGCGA
AGCGAGTGGGTGTCAAGGCCAACCTGGGCACCGCCAAAATGATCGCCGCC
ATCAGGTACTGGACTCAGGAGGAATTAAAGATTGAAGGAAAGGAGGGAGG
GAAGGGGGATGTGAGAGAAGGAATGAAAGAAGCACAACGATGGCATGTTC
CACCCCTCTCGACTCAGTGCCATCCTTCCTCGACATCCGCCACTCTATCC
ACCTGTACAGGGCCAAGCAGTCTGCCTCCTCCTCCTCCACCTTCTCCTCC
TCTTCCACCCCCGCTCCTCCGTCACGTCGGCAATCAGGTGCCACAACAGC
CACTGCCGCCACGACGGAGGAAGGAGAGTGGGAGGAAGACTCTCCACCCC
GGGAAGGCCGTCGGTCCTCGACTCGTGGTTCGATCCCTCCAGTCCCTGCC
TACCTCAAGTGCAAAGACGTCTCGCCCTCCTTTGACCGCCTGGCCTACAT
CAAAAACTCCCGCATGACGGCCCGGGAGAATGAAAGAAAGGCGTTTATAT
TCCGCAAGGTGAGAGAGGGAGGAAGGGAGAGAGGGAGAAAGAGAGGGAGA
GTGGGATGGGGAAAACTCTTAGTCCTCTAACCCCTTCATTCACGTCTCCT
CCATCTCCATCCCACTCTCCTTTCCTATATTCTTCTCTCTCTCACCTCTC
GTTTTCCAGACCTCCACTGAGGTGGCTCGCATCAGCAAGTCCCGTTTCGT
GCACAGCAAAAATCCCGACGCCGTTCGTGGCCGGTGGTGAGGGAGCATGT
GGAGGGGACAGGGGGAGGGACGACGGGGAAGCATTTTTACTTTTATTGCG
GCCCATGCCACACCGCGCTTTCCCTCTATTCTCCATCCTTTCCTGCTGTT
CCCGTGACCACCTCACTCATAATACACGCATGCATCCTCTTCCTCCCTTC
CTCCCTTCCTCCCTCTTTCCCTCCTGCATATCCACAGCGCCACCTCCCAC
CCCAAGATCCAGCAGAAGCGTAACTACGCCCTCGAAGCCACCAAAAGCCA
GCAGCAGTTCAAGGCCAGGTCCACGGTCATGAAGGGAGGCATCAAGCTCA
AGCCCAAGGAGCCTCGTTTCATGAAGGAAAACCGCAAAGTGAGTGTATCT
GCCTTTTCTCTCTCTTTCTCCCTGTCCGTCCTTCCAGAGTAGAGGCAGAG
GTAGTGGCCATGAAATTATTCAGCGTATTCTTCCATTATAAGCTTCTTCC
CTCCCTCTTTTGTCTTCCCTCCCTCGCCAGGCGAAGATGCAGGAGGCCGC
CGTGAAGCACGCGGTGGACTCGATGCAGAAAACCTTGACCCGCCCCCCGA
AGAGGGTCCGCACCCCGGTCAAGCAAGGTGCGAGGAAGGGAAGGAGGGAG
GGAGGGAGGGAGGATGTTTATCACCGCATTCATGTACTGAATGGATCGAT
GCTCATCCAGCTGTACTATGGACCCCAACCCTCTCTCTCTCCCTCCCTTC
CTTCCCCCCTTCCTCGTGGTAGGCCTGAAGAGTGCCGGGCTGATCCGCCG
TAGGAAGTTCGTTGACAGCGCGTCCATCAAGCGCCAAGCCCTCTATGAGA
AGAATCGTCTCCAAGCACTTAAGGAGACAAGCAAGGAGTGAAGGGAATAC
GGAAATGAGGTGATCAAGTAGCAGGTGCTTCAAGGAGTTAGAAGAGAGAA
AGAGAGGCGCAGGTATAGGGGATGGATCGGAGGTACTTGTCATGTAATGT
ATTTTTCTTCAGGGTAGGGGGGGGGGAGACGAAGAGGGCGAGGCTGAGTG
AATAGCTGTTGTGCGCATAGGTAGGGAAACAGTCTGTCGGGTGGACGAAG
GTGAGTGACTGATGCAACAGTAACTTACTCCTTGTCAGAACTTTTTGAAG
TATATGCATGCATTACTTTCACTCATGGCCGTGTTTCTCGCGTCCAAAGG
CGTCGTGCGCCCGTGCATGTTAATAATGGGGGAGGGAAGATGACTGGAGA
CGTGCGTTTTGGCTGGAGCTCCTCTTGCACTCGTCACGGATACAGGACTT
TTGTGACTGGTCGCGGGGAAAGTGACGGGACTACTTGGAGGCCACGGGGG
CGGAAGAGGGACAAAATACGATCTAGGATCATATAATCAAGAAAGTAACA
GTAACACTCAATCAATCACGAGGTGCCGAGAGGAAGGTGAGTAAATGAGC
CCACGTACCGAATGCAATTTGACGGATCGCTGCGTGAGAGACGAAGAGGA
TGTGGAGGGAGGGACGACGACGAGTGAGGGAGTTGGTAACGAGAGAGGGA
TAGAAAGATATAACGTATGACAATGAGGTGTAGGAGCAAGGAAGCTAGCA
AACGGAGGAGAAATGAAAAAGAGAGGCGCGAGTGCAGCGAACATAGAAAG
GCTTGAGGGGAAAGCACGACGTGGTTGTGAGGGCCCGCAGAACGGTAAAG
GTAGAAAGAAAATGACCTGGGATTAAAGGACAACAATAGAAAGAAATGGA
TATGGTTGGTGTTCGCACAAGCTTCACTAGGCATTTAACAAATCACAAAT
CTAAACGATACTGGATTTGAGAGCGAATTCACTGATCCTGTCTGGTACTT
TCCCTTTCTT
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Coding sequence (CDS) from alignment at chr14:959858..963517+

>NO14G03210.1 ID=NO14G03210.1|Name=NO14G03210.1|organism=Nannochloropsis oceanica|type=CDS|length=1434bp|location=Sequence derived from alignment at chr14:959858..963517+ (Nannochloropsis oceanica)
ATGCCTGCAGCCAAATCGGCCGTTACAAAAACTGGTGCTGCTGTGCGCAG
CAGCAAGCGGAAGGAGGCTCCTGCTTCCACTGGCGCTGCCGCTAAGAAGA
GCAGGGAAGCGACGGCTAAGCCCTCCACAAAGAACGTCCCTGTCTCTAAG
GCTGCTGCTGTGGCGTCGACAAGCAAAAAAGGAACCAGCGGGAAGACGGG
TGTCAAACCTATGGCAGCCCCTGCAACTGTTGCCAAAAAAAGCAAGATGG
TGGCCAAGGGCAAGGCTGCCCCCGCCGTGAAGAAGACGGCTTCTTCCTCC
CCCTCCGAGGCCTCGCCTAAGCAGGCTAAAAAGATTACGCTGGTAAGGGC
TCCCATCGCCTCTACAAATGTAGCTGCTAAGGGCAAAGGAGGCAAGGAGG
TGGAGGCAATGGACCGCAAGAGCTTGCAGGCGCTCGCCAAATCGCTGGGC
TTGAAGGCGAACGCCAAGACCTCGGATCTTCTCGCCGCCGTCCTCAGGGA
GCAAAAGGCTGCCAGCGCTTCGTCCTCATTTTCACCTTCGACCACCACCA
CCGCCAGCACCAGCAGCAAGGAGAAGGGGAAAAAGCCTACGGATGAGCTG
GAGGAGATTCCCCGCGCCAAGCTGGTTGCCCTCGCGAAGCGAGTGGGTGT
CAAGGCCAACCTGGGCACCGCCAAAATGATCGCCGCCATCAGGGCCAAGC
AGTCTGCCTCCTCCTCCTCCACCTTCTCCTCCTCTTCCACCCCCGCTCCT
CCGTCACGTCGGCAATCAGGTGCCACAACAGCCACTGCCGCCACGACGGA
GGAAGGAGAGTGGGAGGAAGACTCTCCACCCCGGGAAGGCCGTCGGTCCT
CGACTCGTGGTTCGATCCCTCCAGTCCCTGCCTACCTCAAGTGCAAAGAC
GTCTCGCCCTCCTTTGACCGCCTGGCCTACATCAAAAACTCCCGCATGAC
GGCCCGGGAGAATGAAAGAAAGGCGTTTATATTCCGCAAGACCTCCACTG
AGGTGGCTCGCATCAGCAAGTCCCGTTTCGTGCACAGCAAAAATCCCGAC
GCCGTTCGTGGCCGGTGCGCCACCTCCCACCCCAAGATCCAGCAGAAGCG
TAACTACGCCCTCGAAGCCACCAAAAGCCAGCAGCAGTTCAAGGCCAGGT
CCACGGTCATGAAGGGAGGCATCAAGCTCAAGCCCAAGGAGCCTCGTTTC
ATGAAGGAAAACCGCAAAGCGAAGATGCAGGAGGCCGCCGTGAAGCACGC
GGTGGACTCGATGCAGAAAACCTTGACCCGCCCCCCGAAGAGGGTCCGCA
CCCCGGTCAAGCAAGGCCTGAAGAGTGCCGGGCTGATCCGCCGTAGGAAG
TTCGTTGACAGCGCGTCCATCAAGCGCCAAGCCCTCTATGAGAAGAATCG
TCTCCAAGCACTTAAGGAGACAAGCAAGGAGTGA
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Synonyms
Publications