NO14G02970, NO14G02970 (gene) Nannochloropsis oceanica

Overview
NameNO14G02970
Unique NameNO14G02970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2255
Alignment locationchr14:873581..875835 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:873581..875835 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0043248proteasome assembly
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR01953826S_Psome_nonATP_su5
Homology
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: EWM24510.1 (hypothetical protein Naga_100560g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 274.6 bits (701), Expect = 7.700e-70
Identity = 166/315 (52.70%), Postives = 207/315 (65.71%), Query Frame = 0 
Query:   29 EQWERMKAFLRSLPPADSLSRTPQSLEREKDLVSAFLSQHVSLVQLFLSLDQATRSGDEERLRHVARVIHRCFTSPLGLDLLTDPLVLPNLIVGMKHQEEEVRKLTTKILKQNLQVGEKRVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANALIQGVADSSIAVGQFSADALLAMMRFPVSLPPFLPASSSSXXXFSSLYASNTTLLLSLLHQYASTDPKIVKDSTLRLRYADIIAQALSISDTTPSLHAFLTSSSTGPAAGLLFNLVEGDKTGGTEDVLIRFSALELLD 344
            EQW+R+KAFLR+LPP+DSLSRT QS ERE++LV+ FLSQHVSL+QLFL+LDQATR  D++RL  VAR ++RCFTS LG+DLLTDPLVLP+L++GM+H EEEVR+LTTKIL +NLQ+ E     XXXXXXXXXX                                         A AL QG+AD SIAV Q SADALL+MMR                  F S   ++   LL+ +H++AS +P ++++  LRLRYAD+IA+A +++D  PSLHA L S STGPA  LLF+L  G   GGT D LIRFSALELL+
Sbjct:   18 EQWDRIKAFLRALPPSDSLSRTAQSRERERELVATFLSQHVSLIQLFLALDQATRRADKDRLHQVARAVNRCFTSALGMDLLTDPLVLPHLVLGMRHPEEEVRRLTTKILSENLQLREXXXXXXXXXXXXXXXQALIRRLSVGTGDAEDVVSSLSDPALDPPSASPTSNFPMSVAAALAQGIADPSIAVAQSSADALLSMMR---------------TCAFPSAPTAHIAPLLAHIHRFASVNPDVLRNQVLRLRYADVIARAFALADVQPSLHASLASPSTGPALALLFDLARGASEGGTADELIRFSALELLE 317
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: EWM24514.1 (general transcription factor iih subunit, partial [Nannochloropsis gaditana])

HSP 1 Score: 178.7 bits (452), Expect = 5.700e-41
Identity = 93/160 (58.13%), Postives = 117/160 (73.12%), Query Frame = 0 
Query:  491 GRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAIELETRGEGGEG----REGGREGGVAVGMLGDEVIEELREFLKLGPFYAGRQAEVETTM 647
            GR  ++EV A   LR++LF+RLGE+N SPS+M FVL+QLQ  P P LRHA YH+LVAV+GQEGGWGVRA F+T GFR+FL+SR+TE DK+G EWKYSLV+A+  ET  +GGEG                +LG++V+EELR + K GPFY GRQ +VET M
Sbjct:    1 GREDAEEVTA---LRRILFARLGEMNDSPSSMEFVLRQLQVSPHPRLRHAFYHVLVAVMGQEGGWGVRAAFATGGFRQFLLSRSTERDKVGMEWKYSLVQAVLRET--DGGEGXXXXXXXXXXXXXXXXLLGEDVLEELRTYSKAGPFYVGRQVDVETMM 155
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: OQR91875.1 (hypothetical protein ACHHYP_04281 [Achlya hypogyna])

HSP 1 Score: 87.0 bits (214), Expect = 2.300e-13
Identity = 149/636 (23.43%), Postives = 247/636 (38.84%), Query Frame = 0 
Query:   29 EQWERMKAF-LRSLPPADSLSRTPQSLEREKDLVSAFLSQHVSLVQLFLSLDQATRSGDEERLRHVARVIHRCFTSPLGLDLLTDPLVLPNLIVGMKHQEEEVRKLTTKIL-KQNLQVGEKRVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANALIQGVA----DSSIAVGQFSADALLAMMRFPVSLPPFLPASSSSXXXFSSLYASNTTLLLSLLHQYASTDPKIVKDSTLR-LRYADIIAQALSISDTTPSLHAFLTSSSTGPAAGLLFNLVEGDKTGGTEDVLIRFSALELLDGWIVPHTVARRWHEWEGGRXXXXXXXXXXXXXXXSTVLRYSESRREGDRLAALQVLCCFA-RASREGL------RRVLEDPVLLESWLDMRGGSVEMKTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEV-------VGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAIELETRGEGGEGREGGREGGVAVGMLGDEVIEELREFLKLGPFYAGRQAEVE 644
            E W  +  F  RS+  A +       LERE  LV  F++ HV +  +F  L QA+ +G+ ++++ V + + R F SPLG D+L    +LP L+ G++H E   RKLT  +L  Q L     RV                                                       AL+Q ++    D    + + ++D LL M+  P                 +  Y +   LL   L ++    P++ +D+++  +R  + IA+  S+ D        +T  S G   GLL  ++EG     ++D L + + L+++   ++  T A     +E                  + +++ ++    G   A+L+++  F+ +A+  G+         L    L    L  + G +  K A M ++A               H          AT    EV       V   +    R G     V  E   + +  + LF  LG     PSTM  ++  L+  P   +R A+Y LL AV  Q   WGVR L +  GF E+L+ R+TE  K  +EWK++LV+ +   +                   +LG    ++L  FL  GP YAG+    E
Sbjct:    3 EAWSALSTFHARSVATAGNRDSV---LERE--LVRDFIT-HVPIPAIFGCLQQASDAGEAKQVKLVCQCLERIFQSPLGADILFQEEMLPFLLAGVEHPEPAARKLTLDMLDHQLLPQYHDRVSD----------------------------------------------------EALLQAISSCILDEDPGIARKASDILLKMVSTPE----------------TGHYHNILRLLSEFLKEHL---PELSRDNSVEYVRLLETIAKLSSVGDE-------ITRESAG--RGLLQPILEGIT---SKDSLFQLNILDIIP--VICTTKAGLQIVFES--------------DMLTHLIQTAQDPFIGG--ASLRLIGQFSTKAAAAGITSWNWSNAALSKAFLSAIELSFQTGDLLQKIAAMDAIAAFASASVNELGLLLQHKTLMALFLQCATSTVLEVKANCFMAVATILARPTRLGASANAVPDEAAVIWEHHEALFRALGA--SRPSTMHLLMDTLRQ-PFEEIRVAVYTLLQAVTAQGHPWGVRTLLTYGGFVEYLLDRSTEPTKTTREWKFALVDGLLASSYRH----------------LLGAPQRQDLDGFLAQGP-YAGKSGRAE 511
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: XP_012199545.1 (hypothetical protein SPRG_19726 [Saprolegnia parasitica CBS 223.65] >KDO29844.1 hypothetical protein SPRG_19726 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 86.7 bits (213), Expect = 3.000e-13
Identity = 145/649 (22.34%), Postives = 240/649 (36.98%), Query Frame = 0 
Query:   29 EQWERMKAF-LRSLPPADSLSRTPQSLEREKDLVSAFLSQHVSLVQLFLSLDQATRSGDEERLRHVARVIHRCFTSPLGLDLLTDPLVLPNLIVGMKHQEEEVRKLTTKILKQNLQVGEKRVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANALIQGVADSSIAVGQFSADALLAMMRFPVSLPPFLPASSSSXXXFSSLYASNTTLLLSLLHQYASTDPKIVKDSTLR-LRYADIIAQALSISDTTPSLHAFLTSSSTGPAAGLLFNLVEGDKTGGTEDVLIRFSALELL--------------DGWIVPHTVARRWHEWEGG--------------RXXXXXXXXXXXXXXXSTVLRYSESRREGD---RLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSV-EMKTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAIELETRGEGGEGREGGREGGVAVGMLGDEVIEELREFLKLGPFYAGRQAEVE 644
            E W  +  F  RS+  A        +LERE  LV  F++Q V +  +F  L  A+ +G+ ++++ V + + R F SPLG D+L    + P L+ G+ H E   RKLT  +L   L                                                             +A+   + D    V + ++D L  ++  P                 + +Y +   LL +LL ++    P + +D+++  +R  + IA+  S+ D        +   S G   GLL  ++EG +   ++D L + + L+++                 ++ H +        GG                              S +     S + GD   ++AA+     FA AS   L  +L+   L+  +L+    +V E+K+    +LA  L             A P    +                         RVV  E   +  L + LF  LG   G PSTM  ++  L+  P  ++R A+Y LL AVV Q   WG++ L +  GF E+L+ R+TE  K  +EWK++LV+ I                       +LG +   +L  F  LGP YAG+    E
Sbjct:    3 EAWTALSTFQARSVATA---GNRDSALERE--LVRDFIAQ-VPIPAIFQCLQAASDAGETKQVKLVCQCLERIFRSPLGADILFQEEMRPFLLAGVGHMELSARKLTLNMLDHQL-----------------------------------------------LPQFHDRVSDEALLHAICNCILDDDPGVARKASDLLFKLVSVPA----------------TGIYHAILRLLSALLQEHL---PTLSRDNSVEYVRLLETIAKLASVDDD-------VMQESFG--RGLLQPILEGIQ---SKDSLFQLNILDIIPVLCNTKAGLLLVFQSDVLTHLIRTVQDPLIGGAALRLIGQFSTKAAAVGVPSWNWADASLSKSFLAAIEYSFQVGDALQKIAAMDAAAAFASASENELGLLLQHKTLVTLFLETAHSTVLEVKSNCFMALATIL-------------ARPTTLSKTT-----------------------RVVPDETAPIWILHQSLFRALG--GGRPSTMHLLMDCLRQ-PFDTIRIAVYTLLQAVVAQGHPWGLQTLLAYGGFVEYLLDRSTEPTKTTREWKFALVDGILASPHKT----------------LLGKQQRTDLDTFFALGP-YAGQARRQE 511
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: XP_008892174.1 (hypothetical protein PPTG_02692 [Phytophthora parasitica INRA-310] >ETN22958.1 hypothetical protein PPTG_02692 [Phytophthora parasitica INRA-310])

HSP 1 Score: 85.9 bits (211), Expect = 5.100e-13
Identity = 76/267 (28.46%), Postives = 118/267 (44.19%), Query Frame = 0 
Query:  379 TVLRYSESRREGDRLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSVEM--KTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAIELETRGEGGEGREGGREGGVAVGMLGDEVIEELREFLKLGPFYAGRQAEVE 644
            TV    +S     ++AA+  L  FA +S + L+ +L+   + + WL + G S +M  K    HSLA+ +                   G      +QPE                  + +E   + +L + LF+ LG   G  STM   +  L+  P   LR +++H+L +V  Q   WG+RAL S  GF EFLM RTTE  K  +EWK+++++A+                 G     +L   + E+L+  L+ GP YAG  A  E
Sbjct:  307 TVESKMQSSDSLQQIAAMDALAAFASSSDKELQLLLQHRSICQMWLQL-GSSAKMPVKANCYHSLARVI-------------------GAHTRLSKQPE-----------------QMPEENAGVWNLCERLFNSLGSECGQQSTMVLFMNALKQ-PFEELRTSVFHVLRSVAAQNNPWGMRALLSYGGFFEFLMDRTTEPTKETREWKFAVLDAV----------------LGSPFQPLLDASLREKLQASLRRGP-YAGAAAPAE 518
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: XP_002999162.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69308.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 84.7 bits (208), Expect = 1.100e-12
Identity = 75/267 (28.09%), Postives = 118/267 (44.19%), Query Frame = 0 
Query:  379 TVLRYSESRREGDRLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSVEM--KTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAIELETRGEGGEGREGGREGGVAVGMLGDEVIEELREFLKLGPFYAGRQAEVE 644
            TV R  +S     ++AA+  L  FA +S + L+ +L+   + + WL   G S +M  K    HSLA+ L                   G      +QPE                  V +E   + ++ + LF+ LG      ST+  ++  L+  P   LR +++H+L +V  Q   WG+RAL S  GF EFLM RTTE  K  +EWK+++++A+                       +L   ++E+L+  L+ GP YAG  A  E
Sbjct:  306 TVERKMQSSDSLQQIAAMDALAAFASSSDKELQLLLQYRSICQVWLQF-GSSTKMPVKANCFHSLARVL-------------------GAHTRLAKQPE-----------------QVPEENAGVWNMCERLFNSLGVECAQQSTLVLLMNALKQ-PFEELRTSVFHVLRSVAAQNSAWGMRALLSYGGFFEFLMDRTTEPTKETREWKFAVLDAV----------------LASPFHSLLDASLLEKLQASLRRGP-YAGAAAPAE 517
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: ETI49598.1 (hypothetical protein F443_06590 [Phytophthora parasitica P1569] >ETK89487.1 hypothetical protein L915_06463 [Phytophthora parasitica] >ETL42890.1 hypothetical protein L916_06408 [Phytophthora parasitica] >ETL96063.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM49242.1 hypothetical protein L914_06383 [Phytophthora parasitica] >ETO78314.1 hypothetical protein F444_06662 [Phytophthora parasitica P1976] >ETP19373.1 hypothetical protein F441_06599 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 84.3 bits (207), Expect = 1.500e-12
Identity = 64/216 (29.63%), Postives = 102/216 (47.22%), Query Frame = 0 
Query:  379 TVLRYSESRREGDRLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSVEM--KTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAI 593
            TV    +S     ++AA+  L  FA +S + L+ +L+   + + WL + G S +M  K    HSLA+ +                   G      +QPE                  + +E   + +L + LF+ LG   G  STM  ++  L+  P   LR +++H+L +V  Q   WG+RAL S  GF EFLM RTTE  K  +EWK+++++A+
Sbjct:  307 TVESKMQSSDSLQQIAAMDALAAFASSSDKELQLLLQHRSICQMWLQL-GSSAKMPVKANCYHSLARVI-------------------GAHTRLSKQPE-----------------QMPEENAGVWNLCERLFNSLGSECGQQSTMVLLMNALKQ-PFEELRTSVFHVLRSVAAQNNPWGMRALLSYGGFFEFLMDRTTEPTKETREWKFAVLDAV 484
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: ETL96062.1 (hypothetical protein L917_06273 [Phytophthora parasitica])

HSP 1 Score: 84.3 bits (207), Expect = 1.500e-12
Identity = 64/216 (29.63%), Postives = 102/216 (47.22%), Query Frame = 0 
Query:  379 TVLRYSESRREGDRLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSVEM--KTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAI 593
            TV    +S     ++AA+  L  FA +S + L+ +L+   + + WL + G S +M  K    HSLA+ +                   G      +QPE                  + +E   + +L + LF+ LG   G  STM  ++  L+  P   LR +++H+L +V  Q   WG+RAL S  GF EFLM RTTE  K  +EWK+++++A+
Sbjct:  320 TVESKMQSSDSLQQIAAMDALAAFASSSDKELQLLLQHRSICQMWLQL-GSSAKMPVKANCYHSLARVI-------------------GAHTRLSKQPE-----------------QMPEENAGVWNLCERLFNSLGSECGQQSTMVLLMNALKQ-PFEELRTSVFHVLRSVAAQNNPWGMRALLSYGGFFEFLMDRTTEPTKETREWKFAVLDAV 497
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: ETL96064.1 (hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 84.3 bits (207), Expect = 1.500e-12
Identity = 64/216 (29.63%), Postives = 102/216 (47.22%), Query Frame = 0 
Query:  379 TVLRYSESRREGDRLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSVEM--KTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAI 593
            TV    +S     ++AA+  L  FA +S + L+ +L+   + + WL + G S +M  K    HSLA+ +                   G      +QPE                  + +E   + +L + LF+ LG   G  STM  ++  L+  P   LR +++H+L +V  Q   WG+RAL S  GF EFLM RTTE  K  +EWK+++++A+
Sbjct:  320 TVESKMQSSDSLQQIAAMDALAAFASSSDKELQLLLQHRSICQMWLQL-GSSAKMPVKANCYHSLARVI-------------------GAHTRLSKQPE-----------------QMPEENAGVWNLCERLFNSLGSECGQQSTMVLLMNALKQ-PFEELRTSVFHVLRSVAAQNNPWGMRALLSYGGFFEFLMDRTTEPTKETREWKFAVLDAV 497
[Close]
BLAST of NO14G02970 vs. NCBI_GenBank
Match: ETP47302.1 (hypothetical protein F442_06634 [Phytophthora parasitica P10297])

HSP 1 Score: 84.3 bits (207), Expect = 1.500e-12
Identity = 64/216 (29.63%), Postives = 102/216 (47.22%), Query Frame = 0 
Query:  379 TVLRYSESRREGDRLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSVEM--KTAQMHSLAKALXXXXXXXXXXXXHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAI 593
            TV    +S     ++AA+  L  FA +S + L+ +L+   + + WL + G S +M  K    HSLA+ +                   G      +QPE                  + +E   + +L + LF+ LG   G  STM  ++  L+  P   LR +++H+L +V  Q   WG+RAL S  GF EFLM RTTE  K  +EWK+++++A+
Sbjct:  307 TVESKMQSSDSLQQIAAMDALAAFASSSDKELQLLLQHRSICQMWLQL-GSSAKMPVKANCYHSLARVI-------------------GAHTRLSKQPE-----------------QMPEENAGVWNLCERLFNSLGSECGQQSTMVLLMNALKQ-PFEELRTSVFHVLRSVAAQNNPWGMRALLSYGGFFEFLMDRTTEPTKETREWKFAVLDAV 484
The following BLAST results are available for this feature:
BLAST of NO14G02970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24510.17.700e-7052.70hypothetical protein Naga_100560g1, partial [Nanno... [more]
EWM24514.15.700e-4158.13general transcription factor iih subunit, partial ... [more]
OQR91875.12.300e-1323.43hypothetical protein ACHHYP_04281 [Achlya hypogyna... [more]
XP_012199545.13.000e-1322.34hypothetical protein SPRG_19726 [Saprolegnia paras... [more]
XP_008892174.15.100e-1328.46hypothetical protein PPTG_02692 [Phytophthora para... [more]
XP_002999162.11.100e-1228.09conserved hypothetical protein [Phytophthora infes... [more]
ETI49598.11.500e-1229.63hypothetical protein F443_06590 [Phytophthora para... [more]
ETL96062.11.500e-1229.63hypothetical protein L917_06273 [Phytophthora para... [more]
ETL96064.11.500e-1229.63hypothetical protein, variant 2 [Phytophthora para... [more]
ETP47302.11.500e-1229.63hypothetical protein F442_06634 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02970.1NO14G02970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647309gene_5876Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100678g1gene5964Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02970.1NO14G02970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02970 ID=NO14G02970|Name=NO14G02970|organism=Nannochloropsis oceanica|type=gene|length=2255bp
ATGGCCGCCTCCTCGTCTTCTTCCTCTTCTTCCTCTTCTTCCTCCTCCCC
TCCTCCCTCCTCCTCCTCCCCCGAAACTACCCCCGAGCAATGGGAACGGA
TGAAAGCTTTCCTCCGCTCTCTTCCTCCCGCCGACTCTCTATCTCGGACT
CCCCAGAGCCTAGAGCGCGAAAAAGACCTTGTCAGCGCTTTCCTCTCCCA
GCACGTCTCCCTGGTCCAACTCTTCCTCTCTCTCGATCAGGCCACCCGGA
GTGGGGACGAGGAGAGACTACGTCACGTGGCGCGTGTGATTCATCGATGT
TTCACGTCCCCTCTTGGCCTGGATCTGCTGACTGATCCTCTCGTCTTACC
GAACCTGATTGTAGGGATGAAGCACCAGGAGGAAGAAGTTCGGAAGCTGA
CGACGAAGATTCTGAAGCAGAATTTGCAAGTGGGGGAGAAGCGGGTGGAG
GGAGGTGGGGAAGAGAGGGAGGAGAAGAGGCAGGCGTTGATACGGCGGTT
GGTGCAGGGAGGAGGGAGAGAGGGAGGGGAAGGAGAAGGAGGGGAAAGAG
GAGGAGGAGGGGGAGGAGGAGGAGGAGCGGTGGCTGGTGCCGTTTCGTCC
TCTGTTGCCAATGCTTTGATCCAGGGTGTGGCCGACTCTAGCATTGCCGT
CGGTCAATTTTCTGCAGATGCGCTATTGGCAATGATGCGCTTCCCTGTCT
CCCTCCCTCCATTCCTCCCTGCCTCTTCCTCCTCCACCTCGTCCTTCTCC
TCTCTATATGCCAGCAACACGACCCTCCTCCTCTCCCTTCTTCATCAGTA
CGCAAGCACCGATCCAAAGATTGTAAAGGACAGCACCTTGCGCTTACGGT
ATGCAGACATTATTGCCCAAGCCCTCTCTATATCAGACACCACGCCCTCC
CTCCATGCTTTCCTCACCTCCTCCTCCACCGGCCCCGCCGCCGGCCTGCT
CTTCAACCTCGTGGAGGGAGACAAAACGGGAGGTACCGAAGATGTGTTGA
TTAGGTTCAGTGCATTAGAGCTCTTGGATGGgtgcgtgggtacgagaaac
accgccgcgtatgtgctagaacgagggacggtcagaaccctggtggccct
cgcgacagggagtgagggagggagggagggaggagaaccccacccgattt
tgggggggacggcattgagggttttagGTGGATTGTACCACACACTGTTG
CGAGACGATGGCATGAGTGGGAGGGAGGGAGGGGGGGAGGGAGGGGGGGG
GACGAGGAGATCATGCTGTTGCTCATGAGCACGGTGTTGCGGTATTCGGA
GTCGAGGAGGGAGGGTGACAGGCTGGCGGCGCTGCAGGTGCTGTGTTGCT
TTGCTCGCGCATCGAGGGAAGGGTTGAGGAGGGTGCTGGAAGATCCGGTG
TTGCTTGAAAGCTGGTTGGACATGAGGGGGGGAAGTGTGGAGATGAAAAC
GGCGCAGATGCACAGTCTGGCAAAGGCTCTGGAGGGAGGGAGGGAGGGAG
GAAGGGAGGGAGGGGGCCACGCACCGCCGGAGCAGACGGGGAGGGTCCAG
GCGACTGAACGACAGCCAGAAGTGGTGGGTGTGGAGATGGAGGAGGGAGG
GAGGGAGGGAGGACGAGGGAGGGTAGTGTCACAAGAGGTGCGAGCCCTGT
CAGATTTGCGGAAGCTCCTGTTTTCGCGATTGGGGGAACTGAACGGGAGT
CCGTCGACAATGAGGTTTGTGCTGCAACAGCTGCAGGCCCTGCCTATTCC
GAGCCTGAGACATGCGTTGTATCATCTGCTGGTGGCGGTGGTGGGACAGG
AGGGAGGATGGGGGGTGCGGGCGTTGTTTTCAACGGCCGGGTTTCGGGAG
TTTCTGATGAGCCGGACGACGGAGATGGACAAGATAGGGAAGGAATGGAA
ATACTCGTTGGTGGAGGCAATTGAGCTGGAGACGCGTGGGGAGGGGGGGG
AAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTTGCTGTAGGGATGTTGGGG
GACGAGGTGATAGAGGAGCTAAGAGAATTTTTGAAGCTCGGACCTTTTTA
TGCGGGGAGGCAGGCCGAGGTGGAGACGACGATGTAGGGAGGGAGGGAAA
GTGGAAGGCAAAGAGGGAGAGGTTTGAGGAGAAAGATTCACAAGACACGC
AAGTGTTGGTTGCCTAGGGTCATGCACAAAAGCAAAAAAAGTGAAACGAA
AGACAAGGTTTTTGTGAAATAATGGGAAGAATCATGAAAAAAAAGACGAC
AGAGT
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protein sequence of NO14G02970.1

>NO14G02970.1-protein ID=NO14G02970.1-protein|Name=NO14G02970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=647bp
MAASSSSSSSSSSSSSPPPSSSSPETTPEQWERMKAFLRSLPPADSLSRT
PQSLEREKDLVSAFLSQHVSLVQLFLSLDQATRSGDEERLRHVARVIHRC
FTSPLGLDLLTDPLVLPNLIVGMKHQEEEVRKLTTKILKQNLQVGEKRVE
GGGEEREEKRQALIRRLVQGGGREGGEGEGGERGGGGGGGGGAVAGAVSS
SVANALIQGVADSSIAVGQFSADALLAMMRFPVSLPPFLPASSSSTSSFS
SLYASNTTLLLSLLHQYASTDPKIVKDSTLRLRYADIIAQALSISDTTPS
LHAFLTSSSTGPAAGLLFNLVEGDKTGGTEDVLIRFSALELLDGWIVPHT
VARRWHEWEGGRGGGRGGDEEIMLLLMSTVLRYSESRREGDRLAALQVLC
CFARASREGLRRVLEDPVLLESWLDMRGGSVEMKTAQMHSLAKALEGGRE
GGREGGGHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRA
LSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVG
QEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAIELETRGEG
GEGREGGREGGVAVGMLGDEVIEELREFLKLGPFYAGRQAEVETTM*
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Synonyms
Publications