jgi.p|Nanoce1779_2|647309, gene_5876 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|647309
Unique Namegene_5876
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:806526..808794 -

Link to JBrowse

Properties
Property NameValue
TranscriptId647395
ProteinId647309
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:806526..808794 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02970NO14G02970Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647309mRNA_5876-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647309mRNA_5876Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|647309

>mRNA_5876-protein ID=mRNA_5876-protein|Name=jgi.p|Nanoce1779_2|647309|organism=Nannochloropsis oceanica|type=polypeptide|length=664bp
MAASSSSSSSSSSSSSPPPSSSSPETTPEQWERMKAFLRSLPPADSLSRT
PQSLEREKDLVSAFLSQHVSLVQLFLSLDQATRSGDEERLRHVARVIHRC
FTSPLGLDLLTDPLVLPNLIVGMKHQEEEVRKLTTKILKQNLQVGEKRVE
GGGEEREEKRQALIRRLVQGGGREGGEGEGGERGGGGGGGGGAVAGAVSS
SVANALIQGVADSSIAVGQFSADALLAMMRFPVSLPPFLPASSSSTSSLS
SLYASNTTLLLSLLHQYASTDPKIVKDSTLRLRYADIIAQALSISDTTPS
LHAFLTSSSTGPAAGLLFNLVEGDKTGGTEDVLIRFSALELLDGCVGTRN
TAAYVLERGTVRTLVALATGSEGGREGGEPHPILGGTALRVLGGFTVLRY
SESRREGDRLAALQVLCCFARASREGLRRVLEDPVLLESWLDMRGGSVEM
KTAQMHSLAKALEGGREGGREGGGHAPPEQTGRVQATERQPEVVGVEMEE
GGREGGRGRVVSQEVRALSDLRKLLFSRLGELNGSPSTMRFVLQQLQALP
IPSLRHALYHLLVAVVGQEGGWGVRALFSTAGFREFLMSRTTEMDKIGKE
WKYSLVEAIELETRGEGGEGREGGREGGVAVGMLGDEVIEELREFLKLGP
FYAGRQAEVETTM*
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Synonyms
Publications