NO14G02890, NO14G02890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02890 vs. NCBI_GenBank
Match: EWM24520.1 (PUB domain protein [Nannochloropsis gaditana]) HSP 1 Score: 236.5 bits (602), Expect = 1.700e-58 Identity = 199/312 (63.78%), Postives = 230/312 (73.72%), Query Frame = 0 Query: 35 ISIKIKTLKGGGENSVDLKLTAETTVGQLKAQIASSTLQVPPEAQRLVFQGRMLNDDTKTLAQNKVKEGSCILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPIFPPPSTSTALPAHIVILRAAIAGVRTSNPPEVGATALRTLATMLGNVIANPMEEKYRQLKKNNAAFVRRVGGVSGTGAILRAAGFEESTDTWDLRPSEQGWNLLCSVKAELDSSIATLPPSL---PLXXXXXXXXXLAXXXXXXXXXXXXXXXXXXPAMMQQAMGMMQ-NPAIRDRIMQ 343 I IK+KTLKGGGENSV LK+ T+G+LKAQIA+S L+VP E+QRLVFQG ML DD KTLA++K+ EGSC+LL XXXXXXXXXXXXXXXXXXXXXXXXXXXX TA PA +VILRAAI GVR+SN PEVG AL+TL+TMLGN+IANPMEEK+RQ KK+N AF+RRVG SGTGAILRAAGF+ES TW L+PSEQGW +LC+ K E+D++IA LPPSL XXXXXXXXX XXXXXXXXXXXXXXXXX P M+ MGMMQ NPA+R + ++ Sbjct: 11 IVIKVKTLKGGGENSVSLKVVPNMTIGELKAQIAASALEVPCESQRLVFQGCMLKDDRKTLAEHKLTEGSCVLL-------------------SVLSPSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASPA-VVILRAAITGVRSSNSPEVGTLALQTLSTMLGNIIANPMEEKFRQFKKSNPAFLRRVGSASGTGAILRAAGFQESAQTWVLQPSEQGWGVLCTAKGEIDAAIAALPPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTMLATLMGMMQSNPALRAQALR 302
BLAST of NO14G02890 vs. NCBI_GenBank
Match: CBN76483.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 85.9 bits (211), Expect = 3.600e-13 Identity = 105/247 (42.51%), Postives = 137/247 (55.47%), Query Frame = 0 Query: 43 KGGGENSVDLKLTAETTVGQLKAQIASSTLQVPPEAQRLVFQGRMLNDDTKTLAQNKVKEGSCILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPIFPPPSTSTALPAHIVILRAAIAGVRTSNPPEVGATALRTLATMLGNVIANPMEEKYRQLKKNNAAFVRRVGGVSGTGAILRAAGFEESTD---TWDLRPSEQGWNLLCSVKAELDSSIATLP 287 K G+ S+ L E TVG+LK I S Q E +R++FQGR+LN D +TL K+K+G +++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+A V + P V L TL ++ N+ A+P EEKYR++K+ NA F R+VG V G A +RA GF E D +W L PSE WN+L + + ++ ++ATLP Sbjct: 26 KAAGQVSISL----EGTVGELKGAIRS---QFDVEPKRIIFQGRILNKDDQTLQDCKLKDGLTVVV----------------QVLAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVATV-SRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLP 248
BLAST of NO14G02890 vs. NCBI_GenBank
Match: XP_002289203.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92740.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.0 bits (193), Expect = 4.400e-11 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = 0 Query: 184 LRAAIAGVRTSNPPEVGATALRTLATMLGNVIANPMEEKYRQLKKNNAAFVRRVGGVSGTGAILRAAGFEEST----DTWDLRPSEQGWNLLCSVKAEL 279 L +A+ +RT+N E TAL T +L N+I++PMEEKYR +KK+N AF +R+GGVSG A+L A+GF + +++ LRPS W L + E+ Sbjct: 129 LASAMLTLRTNNNSETYRTALATADKLLSNIISHPMEEKYRSIKKSNPAFHKRLGGVSGGEALLLASGFVVESGGGVESYVLRPSADAWPRLVAAGEEI 227
BLAST of NO14G02890 vs. NCBI_GenBank
Match: GAX09755.1 (hypothetical protein FisN_11Lh277 [Fistulifera solaris]) HSP 1 Score: 77.4 bits (189), Expect = 1.300e-10 Identity = 80/255 (31.37%), Postives = 127/255 (49.80%), Query Frame = 0 Query: 34 AISIKIKTLKGGGENSVDLKLTAETTVGQLKAQIASSTLQVPPEAQRLVFQGRML--NDDTKTLAQNKVKEGSCILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPIFPPPSTSTALPAHIVILRAAIAGVRTSNPPEVGATALRTLATMLGNVIANPMEEKYRQLKKNNAAFVRRVGGVSGTGAILRAAG----FEESTDTWDLRPSEQGWNLLCSVKAELDSSI 283 A++I++ G V L + T QL+ Q+A +T ++P E +L+F+GR++ ND +++ K+++GS + XXXXXXXXXXXXXXXXX A + P ST+ L A + LRA ++ P TA++TL ++ N++ PMEEKYR LKK+N AF R++GG G +++AAG F + + + L+ S + W L + L + + Sbjct: 3 ALTIQLTITGTDGAPKVPLTIEPSITSTQLRQQVAEAT-KIPLETLKLIFRGRIIANNDTQLAVSEFKLEDGSVL------------HCMGKPAPAASTAEGAXXXXXXXXXXXXXXXXXLPASRLSFNAFPSASVSVPDSTADPLQAALATLRAGLS-------PADYLTAVQTLEKIVSNIVTQPMEEKYRSLKKSNVAFQRKLGGKRGGDELMKAAGFIVEFRDGMEYYALQASAEAWPKLVATHGTLQAVV 237
BLAST of NO14G02890 vs. NCBI_GenBank
Match: GAX14734.1 (hypothetical protein FisN_11Hh277 [Fistulifera solaris]) HSP 1 Score: 76.6 bits (187), Expect = 2.200e-10 Identity = 93/270 (34.44%), Postives = 136/270 (50.37%), Query Frame = 0 Query: 35 ISIKIKTLKGGGENSVDLKLTAETTVGQLKAQIASSTLQVPPEAQRLVFQGRML--NDDTKTLAQNKVKEGSCILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPIFPPPSTSTALPAHIVILRAAIAGVRTSNPPEVGATALRTLATMLGNVIANPMEEKYRQLKKNNAAFVRRVGGVSGTGAILRAAGF----EESTDTWDLRPSEQGWNLLCSVKAELDS--------SIATLPPSLP 291 +++ + G V L + T QL+ Q A +T ++P E+ +L+F+GR++ ND +++ K+++GS + XXXXXXXXXXXXXXXXXXXXXXXX FP S S P L+AA+A +R TA++TL +L N++ PMEEKYR LKK+NAAF R++GG G +++AAGF E + + L+ S + W L + L + S A PP +P Sbjct: 4 LTVHLTITGADGAPKVPLTIEPSVTSTQLRQQAAEAT-KIPIESLKLIFRGRLISNNDTQLAVSEFKLEDGSVL-----------------HCMGKPAPAAXXXXXXXXXXXXXXXXXXXXXXXXQPASRLSFNAFPSASVSAPAPT-ADPLQAALATLRAGLSQADYLTAVQTLEKILSNIVTQPMEEKYRSLKKSNAAFQRKLGGKRGGDELMKAAGFIVEIREGVEYYALQASAEAWPKLVATHGILQAVVRQAQAISAAPAPPXVP 254
BLAST of NO14G02890 vs. NCBI_GenBank
Match: OEU12743.1 (hypothetical protein FRACYDRAFT_243999 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.9 bits (185), Expect = 3.700e-10 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 0 Query: 184 LRAAIAGVRTSNPPEVGATALRTLATMLGNVIANPMEEKYRQLKKNNAAFVRRVGGVSGTGAILRAAGFEESTDT------WDLRPSEQGWNLL 272 L+ A+ +R +NPP + AT + TL +L N+I +PMEEKYRQ+KK NAAF +R+GG+ G + A GF DT + L+ + Q W L Sbjct: 166 LKKALVRLRQNNPPSIYATGVTTLERVLKNIIDHPMEEKYRQVKKQNAAFNKRLGGLIGGHDCMLATGFTVDNDTSSSEEVYKLQATAQKWTYL 259
BLAST of NO14G02890 vs. NCBI_GenBank
Match: XP_009839115.1 (hypothetical protein H257_13329 [Aphanomyces astaci] >ETV71449.1 hypothetical protein H257_13329 [Aphanomyces astaci]) HSP 1 Score: 64.7 bits (156), Expect = 8.600e-7 Identity = 31/89 (34.83%), Postives = 52/89 (58.43%), Query Frame = 0 Query: 184 LRAAIAGVRT-----SNPPEVGATALRTLATMLGNVIANPMEEKYRQLKKNNAAFVRRVGGVSGTGAILRAAGFEESTDTWDLRPSEQG 268 + AA+ G+RT S PP+ + TL T+L N++ NP + KY+ ++K+N F+R VG + + A L++ GF+E W L ++ G Sbjct: 342 VHAAVHGLRTALLSHSQPPQ---ATISTLMTLLSNILTNPTDPKYKSIRKDNPRFIRTVGSIVASHAFLQSVGFDEQATHWTLLRNDPG 427 The following BLAST results are available for this feature:
BLAST of NO14G02890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02890 ID=NO14G02890|Name=NO14G02890|organism=Nannochloropsis oceanica|type=gene|length=3753bpback to top protein sequence of NO14G02890.3 >NO14G02890.3-protein ID=NO14G02890.3-protein|Name=NO14G02890.3|organism=Nannochloropsis oceanica|type=polypeptide|length=347bpback to top protein sequence of NO14G02890.2 >NO14G02890.2-protein ID=NO14G02890.2-protein|Name=NO14G02890.2|organism=Nannochloropsis oceanica|type=polypeptide|length=377bpback to top protein sequence of NO14G02890.1 >NO14G02890.1-protein ID=NO14G02890.1-protein|Name=NO14G02890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=463bpback to top Synonyms
Publications
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