NO14G02500, NO14G02500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02500 vs. NCBI_GenBank
Match: XP_024584135.1 (40s ribosomal protein s10 [Plasmopara halstedii] >CEG47766.1 40s ribosomal protein s10 [Plasmopara halstedii]) HSP 1 Score: 137.5 bits (345), Expect = 3.700e-29 Identity = 75/143 (52.45%), Postives = 94/143 (65.73%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDRPEGERERRPFDKEKRLGPDGSFAPSF 144 M + K NR+AVY LFKEGV+VAKKDF S +++PNL+VI L++SLKS GYVKETFNWQ++Y+YLT EGI+YLR YL+LP ++VP T K+ RP RP P G R FDK+K +GP G F P F Sbjct: 1 MLVPKANRIAVYSYLFKEGVMVAKKDF-------SLPKHQAVDVPNLQVIKLMQSLKSRGYVKETFNWQWFYWYLTNEGIEYLRCYLHLPAEIVPATLKKQAARPTRPQA------PPTGGFGRGRFDKDKGVGPSGDFNPEF 130
BLAST of NO14G02500 vs. NCBI_GenBank
Match: OWZ23929.1 (40S ribosomal protein S10 [Phytophthora megakarya]) HSP 1 Score: 137.1 bits (344), Expect = 4.800e-29 Identity = 76/147 (51.70%), Postives = 95/147 (64.63%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDRPEGERERRPFDKEKRLGPDGSFAPSFGGGG 148 M + K NR+AVY LFKEGV+VAKKDF + +++PNL+VI L++SLKS GYVKETFNWQ++Y+YLT EGI+YLR YL+LP ++VP T K+ RP RP G R FDKEK +GP G F P F GG Sbjct: 1 MLVPKTNRIAVYSYLFKEGVMVAKKDF-------ALPKHEAVDVPNLQVIKLMQSLKSRGYVKETFNWQWFYWYLTNEGIEYLRSYLHLPAEIVPATLKKQAARPTRPQA------PSAGGFGRGRFDKEKGVGPSGDFNPEFRRGG 134
BLAST of NO14G02500 vs. NCBI_GenBank
Match: KDQ52763.1 (hypothetical protein JAAARDRAFT_40040 [Jaapia argillacea MUCL 33604]) HSP 1 Score: 134.4 bits (337), Expect = 3.100e-28 Identity = 77/152 (50.66%), Postives = 98/152 (64.47%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDR-----PEGERERRPFDKEKRLGPDGSFAPSFGGGG 148 M I+K+NR +Y NLFKEGVLVAKKD Y +P E +L +PNLEVI ++SL S G+VK F+WQ+YYY LT EG++YLR++L+LP ++VPQTH KK RP RPAG + G P G+RE D K+ G F P F G G Sbjct: 1 MIISKQNRRLIYENLFKEGVLVAKKD------YNAPKHE-ELEMPNLEVIKAMQSLTSKGFVKTQFSWQWYYYTLTPEGVEYLREWLHLPNEIVPQTH-KKAARPPRPAGVRQGGGEGTYRPPRGDRE----DYRKKESAPGEFRPQFAGVG 140
BLAST of NO14G02500 vs. NCBI_GenBank
Match: OCF56316.1 (30S small subunit ribosomal protein S10e [Kwoniella mangroviensis CBS 10435]) HSP 1 Score: 133.3 bits (334), Expect = 7.000e-28 Identity = 73/154 (47.40%), Postives = 96/154 (62.34%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDR-------PEGERERRPFDKEKRLGPDGSFAPSFGGGG 148 M I+K+NR +Y LFKEGVLVA KDF P + ++ NLEVI ++SL S GYVK F+WQ+YYY LT EG+ YLR++LNLP ++VPQTH K RP+G+ +RG+R P G+RE R D ++ G G + P FGG G Sbjct: 1 MLISKQNRRVIYETLFKEGVLVAPKDF------NRPAHPDIPSVKNLEVIKAMQSLTSKGYVKTQFSWQWYYYTLTEEGLAYLREFLNLPSEIVPQTHMKPARPQGRPSGYGDRGNREGGAYRAPRGDREYRRRDDGEKEGASGDYRPRFGGVG 148
BLAST of NO14G02500 vs. NCBI_GenBank
Match: XP_008612132.1 (30S ribosomal protein S10e [Saprolegnia diclina VS20] >XP_012202286.1 hypothetical protein SPRG_07617 [Saprolegnia parasitica CBS 223.65] >EQC34270.1 30S ribosomal protein S10e [Saprolegnia diclina VS20] >KDO26901.1 hypothetical protein SPRG_07617 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.9 bits (333), Expect = 9.100e-28 Identity = 70/145 (48.28%), Postives = 92/145 (63.45%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDRPEGERERRPFDKEKRLGPDGSFAPSFGG 146 M + KKNR+AVY LFKEGV+V KKDF + ++++PNL+VI L++SL S GYVKETFNWQ+YY+YLT EG++YLR YL+LP ++VP T K RP+RP + G K+K +GP G F P F G Sbjct: 1 MLVPKKNRIAVYSYLFKEGVMVGKKDF-------ALPKHGEVDVPNLQVIKLMQSLVSRGYVKETFNWQWYYWYLTAEGLEYLRAYLHLPAEIVPATLKKPAARPSRPQAPSAYG------------RKDKNMGPSGDFNPEFRG 126
BLAST of NO14G02500 vs. NCBI_GenBank
Match: KII85230.1 (hypothetical protein PLICRDRAFT_45410 [Plicaturopsis crispa FD-325 SS-3]) HSP 1 Score: 132.1 bits (331), Expect = 1.600e-27 Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDRP-----EGERERRPFDKEKRLGPDGSFAPSFGGGG 148 M ITK+NR +Y NLFKEGVLVAKKDF +P E +L++PNL+VI L+SL S GYVK F+WQ+YYY LT EG+++LR++L+LP ++VP TH KK RPARPAG GD G+R+ D K+ G G + P F G G Sbjct: 1 MIITKENRRIIYENLFKEGVLVAKKDF------NAPKHE-ELDVPNLQVIKALQSLTSKGYVKTQFSWQWYYYVLTPEGVEFLREWLHLPSEIVPATH-KKAARPARPAGVRAGGDGAYRAPRGGDRD----DYRKKEGAPGEYRPQFAGVG 140
BLAST of NO14G02500 vs. NCBI_GenBank
Match: XP_003027242.1 (40S ribosomal protein S10 [Schizophyllum commune H4-8] >EFI92339.1 hypothetical protein SCHCODRAFT_70772 [Schizophyllum commune H4-8]) HSP 1 Score: 131.7 bits (330), Expect = 2.000e-27 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGD----RPEGERERRPFDKEKRLGPDGSFAPSFGGGG 148 M I+K+NR +Y NLFKEGVLVAKKD Y +P E DL++PNLEVI L+SL S GYVK F+WQ+YYY LT EG++YLR++L+LP ++VP TH KK RP RPA + G+ P G+R+ ++K G G + P+F G G Sbjct: 1 MIISKQNRRVIYENLFKEGVLVAKKD------YNAPKHE-DLDVPNLEVIKALQSLTSKGYVKTQFSWQWYYYTLTPEGVEYLREWLHLPAEIVPATH-KKAARPPRPAQVRQGGEGAYRAPRGDRDDY---RKKEGGAPGDYRPAFAGVG 140
BLAST of NO14G02500 vs. NCBI_GenBank
Match: CCA15088.1 (40S ribosomal protein S10 putative [Albugo laibachii Nc14]) HSP 1 Score: 131.7 bits (330), Expect = 2.000e-27 Identity = 71/143 (49.65%), Postives = 94/143 (65.73%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDRPEGERERRPFDKEKRLGPDGSFAPSF 144 M + KKNR+AVY LFKEGV+VAKKD+ S + +++PNL+VI L++S KS +V+ETF+WQ +Y+YLT EGIDYLR +L+LP+++VP T K+ PARPA G R FDKEK +GP G F P F Sbjct: 1 MLVLKKNRIAVYSYLFKEGVMVAKKDY-------SLPKHDVIDVPNLQVIKLMQSFKSKNFVRETFSWQCFYWYLTNEGIDYLRGFLHLPEEIVPATLKKQAAIPARPAA--------PGNFGRGRFDKEKSVGPSGEFNPEF 128
BLAST of NO14G02500 vs. NCBI_GenBank
Match: OQR91797.1 (40S ribosomal protein S10 [Achlya hypogyna]) HSP 1 Score: 131.3 bits (329), Expect = 2.600e-27 Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRPARPAGFAERGDRPEGERERRPFDKEKRLGPDGSFAPSFGG 146 M + KKNR+AVY LFKEGV+V KKD Y P ++++PNL+VI L++SL S GYVKETFNWQ+YY+YLT EG++YLR YL+LP ++VP T K RP+RP + G K+K +GP G F P F G Sbjct: 1 MLVPKKNRIAVYSYLFKEGVMVGKKD------YALPK-HGEVDVPNLQVIKLMQSLVSRGYVKETFNWQWYYWYLTAEGLEYLRAYLHLPAEIVPATLKKPAARPSRPQAPSAYG------------RKDKNMGPAGDFNPEFRG 126
BLAST of NO14G02500 vs. NCBI_GenBank
Match: XP_009039112.1 (hypothetical protein AURANDRAFT_29821, partial [Aureococcus anophagefferens] >EGB06159.1 hypothetical protein AURANDRAFT_29821, partial [Aureococcus anophagefferens]) HSP 1 Score: 131.0 bits (328), Expect = 3.500e-27 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0 Query: 1 MFITKKNRLAVYHNLFKEGVLVAKKDFYSVWTYKSPDGENDLNLPNLEVINLLKSLKSSGYVKETFNWQYYYYYLTVEGIDYLRQYLNLPQDVVPQTHSKKEGRP 106 MFI KKNRL VY LFKEGVLVAKKD + +++++PNLEV+NL+KSLKS GYV+ETFNWQYYY+YLT EGI+YLR+YL+LP ++VP T K RP Sbjct: 1 MFIPKKNRLEVYSYLFKEGVLVAKKDNFK-------PKHDEIDVPNLEVMNLMKSLKSRGYVRETFNWQYYYWYLTNEGIEYLREYLHLPAEIVPATLKKASARP 98 The following BLAST results are available for this feature:
BLAST of NO14G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02500 ID=NO14G02500|Name=NO14G02500|organism=Nannochloropsis oceanica|type=gene|length=1795bpback to top protein sequence of NO14G02500.1 >NO14G02500.1-protein ID=NO14G02500.1-protein|Name=NO14G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=163bpback to top Synonyms
Publications
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